RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 JPH4Q96JJ6 628 aa28.14■■■□□ 2.1
SND1-203ENST00000463020 ADCY10Q96PN6 1610 aa28.01■■■□□ 2.07
SND1-203ENST00000463020 ABCC10Q5T3U5 1492 aa27.98■■■□□ 2.07
SND1-203ENST00000463020 FAM69CQ0P6D2 419 aa27.95■■■□□ 2.06
SND1-203ENST00000463020 DIP2BQ9P265 1576 aa27.94■■■□□ 2.06
SND1-203ENST00000463020 MAPKBP1O60336 1514 aa27.94■■■□□ 2.06
SND1-203ENST00000463020 IGF1RP08069 1367 aa27.94■■■□□ 2.06
SND1-203ENST00000463020 KIAA0586Q9BVV6 1533 aa27.9■■■□□ 2.06
SND1-203ENST00000463020 CUL7Q14999 1698 aa27.82■■■□□ 2.04
SND1-203ENST00000463020 NPM1P06748 294 aaKnown RBP eCLIP27.82■■■□□ 2.04
SND1-203ENST00000463020 KIF27Q86VH2 1401 aa27.82■■■□□ 2.04
SND1-203ENST00000463020 TSPOAP1O95153 1857 aa27.73■■■□□ 2.03
SND1-203ENST00000463020 KDM6BO15054 1643 aa27.73■■■□□ 2.03
SND1-203ENST00000463020 TTBK1Q5TCY1 1321 aaPredicted RBP27.72■■■□□ 2.03
SND1-203ENST00000463020 PTPRGP23470 1445 aa27.7■■■□□ 2.03
SND1-203ENST00000463020 CARMIL1Q5VZK9 1371 aa27.7■■■□□ 2.02
SND1-203ENST00000463020 KDM4FA0A1W2PPD8 638 aa27.69■■■□□ 2.02
SND1-203ENST00000463020 ABCC2Q92887 1545 aa27.62■■■□□ 2.01
SND1-203ENST00000463020 TNIKQ9UKE5 1360 aa27.61■■■□□ 2.01
SND1-203ENST00000463020 IQGAP2Q13576 1575 aa27.6■■■□□ 2.01
SND1-203ENST00000463020 PPRC1Q5VV67 1664 aaKnown RBP27.59■■■□□ 2.01
SND1-203ENST00000463020 ASXL2Q76L83 1435 aa27.58■■■□□ 2.01
SND1-203ENST00000463020 DISP1Q96F81 1524 aa27.57■■■□□ 2
SND1-203ENST00000463020 CARMIL2Q6F5E8 1435 aa27.55■■■□□ 2
SND1-203ENST00000463020 UHRF1BP1LA0JNW5 1464 aa27.51■■■□□ 2
SND1-203ENST00000463020 GLI2P10070 1586 aa27.5■■□□□ 1.99
SND1-203ENST00000463020 UACAQ9BZF9 1416 aa27.49■■□□□ 1.99
SND1-203ENST00000463020 PLB1Q6P1J6 1458 aa27.48■■□□□ 1.99
SND1-203ENST00000463020 COL17A1Q9UMD9 1497 aaPredicted RBP27.47■■□□□ 1.99
SND1-203ENST00000463020 EPRSP07814 1512 aaKnown RBP27.42■■□□□ 1.98
SND1-203ENST00000463020 UGGT2Q9NYU1 1516 aa27.42■■□□□ 1.98
SND1-203ENST00000463020 KDM5BQ9UGL1 1544 aa27.42■■□□□ 1.98
SND1-203ENST00000463020 RAPGEF2Q9Y4G8 1499 aa27.4■■□□□ 1.98
SND1-203ENST00000463020 KIAA0556O60303 1618 aa27.4■■□□□ 1.98
SND1-203ENST00000463020 ZCCHC11Q5TAX3 1644 aaKnown RBP27.39■■□□□ 1.98
SND1-203ENST00000463020 MAP3K4Q9Y6R4 1608 aa27.38■■□□□ 1.97
SND1-203ENST00000463020 ADGRL1O94910 1474 aa27.35■■□□□ 1.97
SND1-203ENST00000463020 WDR7Q9Y4E6 1490 aa27.24■■□□□ 1.95
SND1-203ENST00000463020 TEX14Q8IWB6 1497 aa27.21■■□□□ 1.95
SND1-203ENST00000463020 CTTNBP2Q8WZ74 1663 aa27.2■■□□□ 1.94
SND1-203ENST00000463020 ABCA8O94911 1581 aa27.18■■□□□ 1.94
SND1-203ENST00000463020 ILDR1Q86SU0 546 aaPredicted RBP27.14■■□□□ 1.94
SND1-203ENST00000463020 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
SND1-203ENST00000463020 HECW2Q9P2P5 1572 aa27.09■■□□□ 1.93
SND1-203ENST00000463020 KCNH8Q96L42 1107 aa27.09■■□□□ 1.93
SND1-203ENST00000463020 CD109Q6YHK3 1445 aa27.08■■□□□ 1.93
SND1-203ENST00000463020 MAGI3Q5TCQ9 1506 aa27.08■■□□□ 1.93
SND1-203ENST00000463020 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
SND1-203ENST00000463020 CFAP43Q8NDM7 1665 aa27.06■■□□□ 1.92
SND1-203ENST00000463020 ARID3CA6NKF2 412 aa27.03■■□□□ 1.92
SND1-203ENST00000463020 P3H3Q8IVL6 736 aa26.97■■□□□ 1.91
SND1-203ENST00000463020 KIF21BO75037 1637 aa26.97■■□□□ 1.91
SND1-203ENST00000463020 ATP10BO94823 1461 aa26.94■■□□□ 1.9
SND1-203ENST00000463020 ARAP3Q8WWN8 1544 aa26.88■■□□□ 1.89
SND1-203ENST00000463020 SAMD9Q5K651 1589 aa26.85■■□□□ 1.89
SND1-203ENST00000463020 ABCA9Q8IUA7 1624 aa26.84■■□□□ 1.89
SND1-203ENST00000463020 RAPGEF3O95398 923 aa26.78■■□□□ 1.88
SND1-203ENST00000463020 RAPGEF6Q8TEU7 1601 aa26.78■■□□□ 1.88
SND1-203ENST00000463020 FRMPD1Q5SYB0 1578 aa26.77■■□□□ 1.88
SND1-203ENST00000463020 NUP153P49790 1475 aaKnown RBP26.74■■□□□ 1.87
SND1-203ENST00000463020 ADAMTSL3P82987 1691 aa26.73■■□□□ 1.87
SND1-203ENST00000463020 CSRNP3Q8WYN3 585 aa26.73■■□□□ 1.87
SND1-203ENST00000463020 PTPRMP28827 1452 aa26.7■■□□□ 1.87
SND1-203ENST00000463020 RANGAP1P46060 587 aaPredicted RBP26.7■■□□□ 1.86
SND1-203ENST00000463020 FHOD3Q2V2M9 1422 aa26.7■■□□□ 1.86
SND1-203ENST00000463020 NEO1Q92859 1461 aa26.68■■□□□ 1.86
SND1-203ENST00000463020 PHLDB1Q86UU1 1377 aa26.66■■□□□ 1.86
SND1-203ENST00000463020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.65■■□□□ 1.86
SND1-203ENST00000463020 HNRNPUL2Q1KMD3 747 aaKnown RBP26.65■■□□□ 1.86
SND1-203ENST00000463020 BCORL1Q5H9F3 1711 aa26.62■■□□□ 1.85
SND1-203ENST00000463020 MADDQ8WXG6 1647 aa26.62■■□□□ 1.85
SND1-203ENST00000463020 FAM9AQ8IZU1 332 aaPredicted RBP26.58■■□□□ 1.85
SND1-203ENST00000463020 ARHGEF40Q8TER5 1519 aa26.56■■□□□ 1.84
SND1-203ENST00000463020 RICTORQ6R327 1708 aa26.56■■□□□ 1.84
SND1-203ENST00000463020 SIGLEC1Q9BZZ2 1709 aa26.55■■□□□ 1.84
SND1-203ENST00000463020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.55■■□□□ 1.84
SND1-203ENST00000463020 TTC37Q6PGP7 1564 aa26.54■■□□□ 1.84
SND1-203ENST00000463020 ARID4BQ4LE39 1312 aaPredicted RBP26.53■■□□□ 1.84
SND1-203ENST00000463020 LMTK3Q96Q04 1460 aa26.52■■□□□ 1.84
SND1-203ENST00000463020 AKNAQ7Z591 1439 aa26.51■■□□□ 1.83
SND1-203ENST00000463020 PCF11O94913 1555 aaKnown RBP26.5■■□□□ 1.83
SND1-203ENST00000463020 DENND4BO75064 1496 aaPredicted RBP26.5■■□□□ 1.83
SND1-203ENST00000463020 RIMS1Q86UR5 1692 aaKnown RBP26.5■■□□□ 1.83
SND1-203ENST00000463020 FANCAO15360 1455 aa26.49■■□□□ 1.83
SND1-203ENST00000463020 CDK13Q14004 1512 aaKnown RBP26.49■■□□□ 1.83
SND1-203ENST00000463020 EEA1Q15075 1411 aa26.48■■□□□ 1.83
SND1-203ENST00000463020 YEATS2Q9ULM3 1422 aa26.48■■□□□ 1.83
SND1-203ENST00000463020 PLEKHD1A6NEE1 506 aa26.47■■□□□ 1.83
SND1-203ENST00000463020 FBXO41Q8TF61 875 aa26.45■■□□□ 1.82
SND1-203ENST00000463020 ZMYM4Q5VZL5 1548 aa26.43■■□□□ 1.82
SND1-203ENST00000463020 EFCAB5A4FU69 1503 aa26.42■■□□□ 1.82
SND1-203ENST00000463020 CFAP74Q9C0B2 1584 aa26.41■■□□□ 1.82
SND1-203ENST00000463020 ZFYVE16Q7Z3T8 1539 aa26.39■■□□□ 1.82
SND1-203ENST00000463020 HSPA2P54652 639 aa26.39■■□□□ 1.82
SND1-203ENST00000463020 PLPPR3Q6T4P5 718 aa26.39■■□□□ 1.82
SND1-203ENST00000463020 HECW1Q76N89 1606 aa26.38■■□□□ 1.81
SND1-203ENST00000463020 EHMT2Q96KQ7 1210 aa26.36■■□□□ 1.81
SND1-203ENST00000463020 POGZQ7Z3K3 1410 aa26.32■■□□□ 1.8
SND1-203ENST00000463020 PLCH2O75038 1416 aa26.31■■□□□ 1.8
SND1-203ENST00000463020 SCAPERQ9BY12 1400 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms