RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CEP170Q5SW79 1584 aa14.49□□□□□ -0.09
SMC3-202ENST00000462899 ADAMTS12P58397 1594 aa14.48□□□□□ -0.09
SMC3-202ENST00000462899 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
SMC3-202ENST00000462899 NUP160Q12769 1436 aa14.47□□□□□ -0.09
SMC3-202ENST00000462899 BIVM-ERCC5R4GMW8 1640 aa14.38□□□□□ -0.11
SMC3-202ENST00000462899 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
SMC3-202ENST00000462899 ERICH3Q5RHP9 1530 aa14.34□□□□□ -0.11
SMC3-202ENST00000462899 FHAD1B1AJZ9 1412 aa14.33□□□□□ -0.11
SMC3-202ENST00000462899 KCNA4P22459 653 aa14.32□□□□□ -0.12
SMC3-202ENST00000462899 WRNQ14191 1432 aaPredicted RBP eCLIP14.31□□□□□ -0.12
SMC3-202ENST00000462899 MAPKBP1O60336 1514 aa14.31□□□□□ -0.12
SMC3-202ENST00000462899 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
SMC3-202ENST00000462899 DIP2BQ9P265 1576 aa14.3□□□□□ -0.12
SMC3-202ENST00000462899 ABCC10Q5T3U5 1492 aa14.29□□□□□ -0.12
SMC3-202ENST00000462899 DMRT2Q9Y5R5 561 aa14.28□□□□□ -0.12
SMC3-202ENST00000462899 ADCY10Q96PN6 1610 aa14.26□□□□□ -0.13
SMC3-202ENST00000462899 PRG4Q92954 1404 aaPredicted RBP14.26□□□□□ -0.13
SMC3-202ENST00000462899 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
SMC3-202ENST00000462899 KDM6BO15054 1643 aa14.22□□□□□ -0.13
SMC3-202ENST00000462899 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
SMC3-202ENST00000462899 TSPOAP1O95153 1857 aa14.18□□□□□ -0.14
SMC3-202ENST00000462899 KDM4FA0A1W2PPD8 638 aa14.17□□□□□ -0.14
SMC3-202ENST00000462899 JPH4Q96JJ6 628 aa14.17□□□□□ -0.14
SMC3-202ENST00000462899 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
SMC3-202ENST00000462899 PPRC1Q5VV67 1664 aaKnown RBP14.15□□□□□ -0.14
SMC3-202ENST00000462899 FAM69CQ0P6D2 419 aa14.15□□□□□ -0.14
SMC3-202ENST00000462899 KIAA0586Q9BVV6 1533 aa14.1□□□□□ -0.15
SMC3-202ENST00000462899 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
SMC3-202ENST00000462899 CUL7Q14999 1698 aa14.08□□□□□ -0.16
SMC3-202ENST00000462899 GLI2P10070 1586 aa14.07□□□□□ -0.16
SMC3-202ENST00000462899 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMC3-202ENST00000462899 ILDR1Q86SU0 546 aaPredicted RBP14.04□□□□□ -0.16
SMC3-202ENST00000462899 ABCC2Q92887 1545 aa14.02□□□□□ -0.16
SMC3-202ENST00000462899 ADGRL1O94910 1474 aa14.01□□□□□ -0.17
SMC3-202ENST00000462899 MAP3K4Q9Y6R4 1608 aa14.01□□□□□ -0.17
SMC3-202ENST00000462899 IGF1RP08069 1367 aa13.99□□□□□ -0.17
SMC3-202ENST00000462899 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
SMC3-202ENST00000462899 COL17A1Q9UMD9 1497 aaPredicted RBP13.98□□□□□ -0.17
SMC3-202ENST00000462899 HECW2Q9P2P5 1572 aa13.97□□□□□ -0.17
SMC3-202ENST00000462899 PLB1Q6P1J6 1458 aa13.97□□□□□ -0.17
SMC3-202ENST00000462899 ASXL2Q76L83 1435 aa13.97□□□□□ -0.17
SMC3-202ENST00000462899 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
SMC3-202ENST00000462899 PTPRGP23470 1445 aa13.96□□□□□ -0.18
SMC3-202ENST00000462899 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
SMC3-202ENST00000462899 IQGAP2Q13576 1575 aa13.94□□□□□ -0.18
SMC3-202ENST00000462899 KIF27Q86VH2 1401 aa13.93□□□□□ -0.18
SMC3-202ENST00000462899 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
SMC3-202ENST00000462899 EPRSP07814 1512 aaKnown RBP13.93□□□□□ -0.18
SMC3-202ENST00000462899 TNIKQ9UKE5 1360 aa13.93□□□□□ -0.18
SMC3-202ENST00000462899 DISP1Q96F81 1524 aa13.92□□□□□ -0.18
SMC3-202ENST00000462899 KDM5BQ9UGL1 1544 aa13.92□□□□□ -0.18
SMC3-202ENST00000462899 ZCCHC11Q5TAX3 1644 aaKnown RBP13.92□□□□□ -0.18
SMC3-202ENST00000462899 CARMIL2Q6F5E8 1435 aa13.9□□□□□ -0.19
SMC3-202ENST00000462899 UACAQ9BZF9 1416 aa13.89□□□□□ -0.19
SMC3-202ENST00000462899 TEX14Q8IWB6 1497 aa13.87□□□□□ -0.19
SMC3-202ENST00000462899 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
SMC3-202ENST00000462899 UGGT2Q9NYU1 1516 aa13.86□□□□□ -0.19
SMC3-202ENST00000462899 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
SMC3-202ENST00000462899 CFAP43Q8NDM7 1665 aa13.83□□□□□ -0.2
SMC3-202ENST00000462899 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
SMC3-202ENST00000462899 MAGI3Q5TCQ9 1506 aa13.79□□□□□ -0.2
SMC3-202ENST00000462899 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
SMC3-202ENST00000462899 KIF21BO75037 1637 aa13.78□□□□□ -0.2
SMC3-202ENST00000462899 CTTNBP2Q8WZ74 1663 aa13.77□□□□□ -0.21
SMC3-202ENST00000462899 TTBK1Q5TCY1 1321 aaPredicted RBP13.76□□□□□ -0.21
SMC3-202ENST00000462899 ABCA8O94911 1581 aa13.75□□□□□ -0.21
SMC3-202ENST00000462899 RAPGEF2Q9Y4G8 1499 aa13.73□□□□□ -0.21
SMC3-202ENST00000462899 ADAMTSL3P82987 1691 aa13.72□□□□□ -0.21
SMC3-202ENST00000462899 ARAP3Q8WWN8 1544 aa13.7□□□□□ -0.22
SMC3-202ENST00000462899 CD109Q6YHK3 1445 aa13.7□□□□□ -0.22
SMC3-202ENST00000462899 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
SMC3-202ENST00000462899 FBXO41Q8TF61 875 aa13.65□□□□□ -0.22
SMC3-202ENST00000462899 BCORL1Q5H9F3 1711 aa13.64□□□□□ -0.23
SMC3-202ENST00000462899 PTPRMP28827 1452 aa13.64□□□□□ -0.23
SMC3-202ENST00000462899 FRMPD1Q5SYB0 1578 aa13.63□□□□□ -0.23
SMC3-202ENST00000462899 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
SMC3-202ENST00000462899 PCF11O94913 1555 aaKnown RBP13.61□□□□□ -0.23
SMC3-202ENST00000462899 MADDQ8WXG6 1647 aa13.61□□□□□ -0.23
SMC3-202ENST00000462899 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
SMC3-202ENST00000462899 LMTK3Q96Q04 1460 aa13.59□□□□□ -0.23
SMC3-202ENST00000462899 ATP10BO94823 1461 aa13.56□□□□□ -0.24
SMC3-202ENST00000462899 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
SMC3-202ENST00000462899 RICTORQ6R327 1708 aa13.56□□□□□ -0.24
SMC3-202ENST00000462899 NEO1Q92859 1461 aa13.55□□□□□ -0.24
SMC3-202ENST00000462899 PRXQ9BXM0 1461 aa13.55□□□□□ -0.24
SMC3-202ENST00000462899 ARHGEF40Q8TER5 1519 aa13.55□□□□□ -0.24
SMC3-202ENST00000462899 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
SMC3-202ENST00000462899 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
SMC3-202ENST00000462899 RIMS1Q86UR5 1692 aaKnown RBP13.54□□□□□ -0.24
SMC3-202ENST00000462899 SIGLEC1Q9BZZ2 1709 aa13.54□□□□□ -0.24
SMC3-202ENST00000462899 RAPGEF6Q8TEU7 1601 aa13.51□□□□□ -0.25
SMC3-202ENST00000462899 RAPGEF3O95398 923 aa13.47□□□□□ -0.25
SMC3-202ENST00000462899 ZMYM4Q5VZL5 1548 aa13.47□□□□□ -0.25
SMC3-202ENST00000462899 NUP153P49790 1475 aaKnown RBP13.45□□□□□ -0.26
SMC3-202ENST00000462899 CFAP74Q9C0B2 1584 aa13.45□□□□□ -0.26
SMC3-202ENST00000462899 FER1L4A9Z1Z3 1794 aa13.44□□□□□ -0.26
SMC3-202ENST00000462899 FHOD3Q2V2M9 1422 aa13.44□□□□□ -0.26
SMC3-202ENST00000462899 TTC37Q6PGP7 1564 aa13.44□□□□□ -0.26
SMC3-202ENST00000462899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMC3-202ENST00000462899 FANCAO15360 1455 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms