RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 ZNF579Q8NAF0 562 aaKnown RBP7.01□□□□□ -1.29
ERCC4-203ENST00000462862 RSF1Q96T23 1441 aaPredicted RBP7.01□□□□□ -1.29
ERCC4-203ENST00000462862 PAK3O75914 559 aaPredicted RBP6.99□□□□□ -1.29
ERCC4-203ENST00000462862 POTEIP0CG38 1075 aa6.99□□□□□ -1.29
ERCC4-203ENST00000462862 DCBLD2Q96PD2 775 aa6.97□□□□□ -1.29
ERCC4-203ENST00000462862 LHX8Q68G74 356 aa6.96□□□□□ -1.3
ERCC4-203ENST00000462862 GALR2O43603 387 aaPredicted RBP6.94□□□□□ -1.3
ERCC4-203ENST00000462862 MIER1Q8N108 512 aa6.94□□□□□ -1.3
ERCC4-203ENST00000462862 PHF12Q96QT6 1004 aa6.94□□□□□ -1.3
ERCC4-203ENST00000462862 PLEKHG5O94827 1062 aa6.92□□□□□ -1.3
ERCC4-203ENST00000462862 FKBP8Q14318 412 aa6.92□□□□□ -1.3
ERCC4-203ENST00000462862 UNC13AQ9UPW8 1703 aa6.92□□□□□ -1.3
ERCC4-203ENST00000462862 PEG3Q9GZU2 1588 aa6.91□□□□□ -1.3
ERCC4-203ENST00000462862 TSPYL2Q9H2G4 693 aaPredicted RBP6.91□□□□□ -1.3
ERCC4-203ENST00000462862 SMARCA4P51532 1647 aa6.9□□□□□ -1.3
ERCC4-203ENST00000462862 MROH2BQ7Z745 1585 aa6.9□□□□□ -1.31
ERCC4-203ENST00000462862 BICRAQ9NZM4 1560 aa6.9□□□□□ -1.31
ERCC4-203ENST00000462862 CECR2Q9BXF3 1484 aa6.89□□□□□ -1.31
ERCC4-203ENST00000462862 TOP2AP11388 1531 aaKnown RBP6.89□□□□□ -1.31
ERCC4-203ENST00000462862 PLCD3Q8N3E9 789 aa6.87□□□□□ -1.31
ERCC4-203ENST00000462862 SMARCA2P51531 1590 aa6.86□□□□□ -1.31
ERCC4-203ENST00000462862 MS4A3Q96HJ5 214 aa6.84□□□□□ -1.31
ERCC4-203ENST00000462862 CCDC61Q9Y6R9 512 aa6.84□□□□□ -1.31
ERCC4-203ENST00000462862 RASEFQ8IZ41 740 aa6.83□□□□□ -1.32
ERCC4-203ENST00000462862 WIZO95785 1651 aa6.82□□□□□ -1.32
ERCC4-203ENST00000462862 PELP1Q8IZL8 1130 aaKnown RBP6.81□□□□□ -1.32
ERCC4-203ENST00000462862 KIF12Q96FN5 646 aa6.81□□□□□ -1.32
ERCC4-203ENST00000462862 ZBTB47Q9UFB7 747 aaPredicted RBP6.81□□□□□ -1.32
ERCC4-203ENST00000462862 ATMINO43313 823 aaPredicted RBP6.79□□□□□ -1.32
ERCC4-203ENST00000462862 ASTLQ6HA08 431 aaPredicted RBP6.79□□□□□ -1.32
ERCC4-203ENST00000462862 HMGXB3Q12766 1538 aa6.79□□□□□ -1.32
ERCC4-203ENST00000462862 MAP3K13O43283 966 aa6.78□□□□□ -1.32
ERCC4-203ENST00000462862 ATAD2BQ9ULI0 1458 aa6.78□□□□□ -1.32
ERCC4-203ENST00000462862 POTEB2H3BUK9 544 aa6.77□□□□□ -1.33
ERCC4-203ENST00000462862 NUBP1P53384 320 aa6.77□□□□□ -1.33
ERCC4-203ENST00000462862 FBXO3Q9UK99 471 aa6.77□□□□□ -1.33
ERCC4-203ENST00000462862 NCAPD3P42695 1498 aa6.76□□□□□ -1.33
ERCC4-203ENST00000462862 BAZ1BQ9UIG0 1483 aaKnown RBP6.76□□□□□ -1.33
ERCC4-203ENST00000462862 EIF4G1Q04637 1599 aaKnown RBP6.76□□□□□ -1.33
ERCC4-203ENST00000462862 ATN1P54259 1190 aaPredicted RBP6.75□□□□□ -1.33
ERCC4-203ENST00000462862 SLC39A7Q92504 469 aa6.75□□□□□ -1.33
ERCC4-203ENST00000462862 TRPC6Q9Y210 931 aa6.75□□□□□ -1.33
ERCC4-203ENST00000462862 CCDC88BA6NC98 1476 aa6.74□□□□□ -1.33
ERCC4-203ENST00000462862 C7P10643 843 aa6.74□□□□□ -1.33
ERCC4-203ENST00000462862 METRNQ9UJH8 293 aa6.74□□□□□ -1.33
ERCC4-203ENST00000462862 EEA1Q15075 1411 aa6.74□□□□□ -1.33
ERCC4-203ENST00000462862 OTUD5Q96G74 571 aa6.73□□□□□ -1.33
ERCC4-203ENST00000462862 TIE1P35590 1138 aa6.72□□□□□ -1.33
ERCC4-203ENST00000462862 TRIM41Q8WV44 630 aa6.72□□□□□ -1.33
ERCC4-203ENST00000462862 FAM212AQ96EL1 285 aa6.72□□□□□ -1.33
ERCC4-203ENST00000462862 BMP2KQ9NSY1 1161 aaPredicted RBP6.72□□□□□ -1.33
ERCC4-203ENST00000462862 DCAF8Q5TAQ9 597 aa6.71□□□□□ -1.34
ERCC4-203ENST00000462862 SGIP1Q9BQI5 828 aa6.71□□□□□ -1.34
ERCC4-203ENST00000462862 PCDHB13Q9Y5F0 798 aa6.71□□□□□ -1.34
ERCC4-203ENST00000462862 TTLL13PA6NNM8 815 aa6.68□□□□□ -1.34
ERCC4-203ENST00000462862 KLHL34Q8N239 644 aa6.68□□□□□ -1.34
ERCC4-203ENST00000462862 POTEJP0CG39 1038 aa6.67□□□□□ -1.34
ERCC4-203ENST00000462862 VASPP50552 380 aaPredicted RBP6.67□□□□□ -1.34
ERCC4-203ENST00000462862 IFNL1Q8IU54 200 aa6.67□□□□□ -1.34
ERCC4-203ENST00000462862 PCDH10Q9P2E7 1040 aa6.66□□□□□ -1.34
ERCC4-203ENST00000462862 POTEFA5A3E0 1075 aa6.65□□□□□ -1.34
ERCC4-203ENST00000462862 PYGBP11216 843 aa6.65□□□□□ -1.34
ERCC4-203ENST00000462862 MAMSTRQ6ZN01 415 aa6.64□□□□□ -1.35
ERCC4-203ENST00000462862 TRIM35Q9UPQ4 493 aa6.64□□□□□ -1.35
ERCC4-203ENST00000462862 WRNQ14191 1432 aaPredicted RBP eCLIP6.64□□□□□ -1.35
ERCC4-203ENST00000462862 SEC24BO95487 1268 aa6.63□□□□□ -1.35
ERCC4-203ENST00000462862 CFTRP13569 1480 aa6.62□□□□□ -1.35
ERCC4-203ENST00000462862 TMEM106CQ9BVX2 250 aa6.62□□□□□ -1.35
ERCC4-203ENST00000462862 COLQQ9Y215 455 aaPredicted RBP6.62□□□□□ -1.35
ERCC4-203ENST00000462862 GSE1Q14687 1217 aa6.61□□□□□ -1.35
ERCC4-203ENST00000462862 SCUBE2Q9NQ36 999 aa6.61□□□□□ -1.35
ERCC4-203ENST00000462862 IER5LQ5T953 404 aa6.6□□□□□ -1.35
ERCC4-203ENST00000462862 PCDHB8Q9UN66 801 aa6.59□□□□□ -1.35
ERCC4-203ENST00000462862 PRDM2Q13029 1718 aa6.59□□□□□ -1.36
ERCC4-203ENST00000462862 TOP2BQ02880 1626 aa6.58□□□□□ -1.36
ERCC4-203ENST00000462862 IFNLR1Q8IU57 520 aaPredicted RBP6.57□□□□□ -1.36
ERCC4-203ENST00000462862 BIVM-ERCC5R4GMW8 1640 aa6.57□□□□□ -1.36
ERCC4-203ENST00000462862 CADPSQ9ULU8 1353 aa6.57□□□□□ -1.36
ERCC4-203ENST00000462862 CC2D2AQ9P2K1 1620 aa6.56□□□□□ -1.36
ERCC4-203ENST00000462862 CEP164Q9UPV0 1460 aa6.55□□□□□ -1.36
ERCC4-203ENST00000462862 CHRM1P11229 460 aaPredicted RBP6.55□□□□□ -1.36
ERCC4-203ENST00000462862 SPOCK2Q92563 424 aa6.55□□□□□ -1.36
ERCC4-203ENST00000462862 ABCC8Q09428 1581 aa6.55□□□□□ -1.36
ERCC4-203ENST00000462862 POTEMA6NI47 508 aa6.54□□□□□ -1.36
ERCC4-203ENST00000462862 PLCG2P16885 1265 aa6.54□□□□□ -1.36
ERCC4-203ENST00000462862 ZNF467Q7Z7K2 595 aaPredicted RBP6.54□□□□□ -1.36
ERCC4-203ENST00000462862 FAM163AQ96GL9 167 aaPredicted RBP6.54□□□□□ -1.36
ERCC4-203ENST00000462862 TNIKQ9UKE5 1360 aa6.54□□□□□ -1.36
ERCC4-203ENST00000462862 KIF21BO75037 1637 aa6.54□□□□□ -1.36
ERCC4-203ENST00000462862 GOLGA3Q08378 1498 aa6.53□□□□□ -1.36
ERCC4-203ENST00000462862 IRX5P78411 483 aaPredicted RBP6.53□□□□□ -1.36
ERCC4-203ENST00000462862 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
ERCC4-203ENST00000462862 OCEL1Q9H607 264 aa6.52□□□□□ -1.37
ERCC4-203ENST00000462862 SYNJ1O43426 1573 aa6.52□□□□□ -1.37
ERCC4-203ENST00000462862 LAMC3Q9Y6N6 1575 aa6.52□□□□□ -1.37
ERCC4-203ENST00000462862 ERICH3Q5RHP9 1530 aa6.51□□□□□ -1.37
ERCC4-203ENST00000462862 POTEGQ6S5H5 508 aa6.51□□□□□ -1.37
ERCC4-203ENST00000462862 KIF27Q86VH2 1401 aa6.5□□□□□ -1.37
ERCC4-203ENST00000462862 PSEN1P49768 467 aa6.49□□□□□ -1.37
ERCC4-203ENST00000462862 GOLGA2Q08379 1002 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms