RNA–Protein interactions for RNA: ENST00000462018.1

GABRE-204, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-204ENST00000462018 TSPOAP1O95153 1857 aa15.6■□□□□ 0.09
GABRE-204ENST00000462018 SOCS7O14512 581 aa15.59■□□□□ 0.09
GABRE-204ENST00000462018 ILDR2Q71H61 639 aa15.59■□□□□ 0.09
GABRE-204ENST00000462018 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
GABRE-204ENST00000462018 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
GABRE-204ENST00000462018 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
GABRE-204ENST00000462018 MAPKBP1O60336 1514 aa15.53■□□□□ 0.08
GABRE-204ENST00000462018 PIAS4Q8N2W9 510 aaPredicted RBP15.53■□□□□ 0.08
GABRE-204ENST00000462018 GRIN2AQ12879 1464 aa15.46■□□□□ 0.07
GABRE-204ENST00000462018 NUP160Q12769 1436 aa15.44■□□□□ 0.06
GABRE-204ENST00000462018 DISP3Q9P2K9 1392 aa15.42■□□□□ 0.06
GABRE-204ENST00000462018 ABCA5Q8WWZ7 1642 aa15.42■□□□□ 0.06
GABRE-204ENST00000462018 ADCY10Q96PN6 1610 aa15.42■□□□□ 0.06
GABRE-204ENST00000462018 PPRC1Q5VV67 1664 aaKnown RBP15.41■□□□□ 0.06
GABRE-204ENST00000462018 CUX1P39880 1505 aa15.38■□□□□ 0.05
GABRE-204ENST00000462018 ADAMTS12P58397 1594 aa15.38■□□□□ 0.05
GABRE-204ENST00000462018 PRG4Q92954 1404 aaPredicted RBP15.35■□□□□ 0.05
GABRE-204ENST00000462018 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.04
GABRE-204ENST00000462018 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
GABRE-204ENST00000462018 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
GABRE-204ENST00000462018 SPATA31D1Q6ZQQ2 1576 aa15.29■□□□□ 0.04
GABRE-204ENST00000462018 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.03
GABRE-204ENST00000462018 RUSC2Q8N2Y8 1516 aa15.2■□□□□ 0.02
GABRE-204ENST00000462018 GLI2P10070 1586 aa15.19■□□□□ 0.02
GABRE-204ENST00000462018 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
GABRE-204ENST00000462018 JPH4Q96JJ6 628 aa15.18■□□□□ 0.02
GABRE-204ENST00000462018 KIF21BO75037 1637 aa15.15■□□□□ 0.02
GABRE-204ENST00000462018 PCF11O94913 1555 aaKnown RBP15.13■□□□□ 0.01
GABRE-204ENST00000462018 MAP3K4Q9Y6R4 1608 aa15.13■□□□□ 0.01
GABRE-204ENST00000462018 ASXL2Q76L83 1435 aa15.11■□□□□ 0.01
GABRE-204ENST00000462018 CERKQ8TCT0 537 aa15.1■□□□□ 0.01
GABRE-204ENST00000462018 PTPRMP28827 1452 aa15.08■□□□□ 0
GABRE-204ENST00000462018 CUL7Q14999 1698 aa15.06■□□□□ 0
GABRE-204ENST00000462018 PLB1Q6P1J6 1458 aa15.06■□□□□ 0
GABRE-204ENST00000462018 TEX14Q8IWB6 1497 aa15.06■□□□□ 0
GABRE-204ENST00000462018 ABCC2Q92887 1545 aa15.05■□□□□ -0
GABRE-204ENST00000462018 ERICH3Q5RHP9 1530 aa15.04■□□□□ -0
GABRE-204ENST00000462018 KCNA4P22459 653 aa15.04■□□□□ -0
GABRE-204ENST00000462018 ADAMTSL3P82987 1691 aa15.03■□□□□ -0
GABRE-204ENST00000462018 EPRSP07814 1512 aaKnown RBP15.02■□□□□ -0
GABRE-204ENST00000462018 PPP4R3CPQ6ZMV5 832 aa15□□□□□ -0.01
GABRE-204ENST00000462018 HSPA2P54652 639 aa14.95□□□□□ -0.02
GABRE-204ENST00000462018 MADDQ8WXG6 1647 aa14.95□□□□□ -0.02
GABRE-204ENST00000462018 KIAA0586Q9BVV6 1533 aa14.94□□□□□ -0.02
GABRE-204ENST00000462018 TTBK1Q5TCY1 1321 aaPredicted RBP14.93□□□□□ -0.02
GABRE-204ENST00000462018 PTPRGP23470 1445 aa14.93□□□□□ -0.02
GABRE-204ENST00000462018 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
GABRE-204ENST00000462018 MSH5O43196 834 aa14.91□□□□□ -0.02
GABRE-204ENST00000462018 BCORL1Q5H9F3 1711 aa14.89□□□□□ -0.03
GABRE-204ENST00000462018 UHRF1BP1LA0JNW5 1464 aa14.88□□□□□ -0.03
GABRE-204ENST00000462018 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
GABRE-204ENST00000462018 RIMS1Q86UR5 1692 aaKnown RBP14.87□□□□□ -0.03
GABRE-204ENST00000462018 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
GABRE-204ENST00000462018 KDM5BQ9UGL1 1544 aa14.84□□□□□ -0.03
GABRE-204ENST00000462018 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.04
GABRE-204ENST00000462018 MAGI3Q5TCQ9 1506 aa14.82□□□□□ -0.04
GABRE-204ENST00000462018 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
GABRE-204ENST00000462018 CFAP43Q8NDM7 1665 aa14.81□□□□□ -0.04
GABRE-204ENST00000462018 WDR7Q9Y4E6 1490 aa14.78□□□□□ -0.04
GABRE-204ENST00000462018 CD109Q6YHK3 1445 aa14.77□□□□□ -0.04
GABRE-204ENST00000462018 ARAP3Q8WWN8 1544 aa14.73□□□□□ -0.05
GABRE-204ENST00000462018 CARMIL2Q6F5E8 1435 aa14.73□□□□□ -0.05
GABRE-204ENST00000462018 STRCQ7RTU9 1775 aa14.72□□□□□ -0.05
GABRE-204ENST00000462018 MED1Q15648 1581 aaPredicted RBP14.68□□□□□ -0.06
GABRE-204ENST00000462018 FRMPD1Q5SYB0 1578 aa14.68□□□□□ -0.06
GABRE-204ENST00000462018 ARID4BQ4LE39 1312 aaPredicted RBP14.68□□□□□ -0.06
GABRE-204ENST00000462018 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
GABRE-204ENST00000462018 DISP1Q96F81 1524 aa14.67□□□□□ -0.06
GABRE-204ENST00000462018 LTBP4Q8N2S1 1624 aa14.66□□□□□ -0.06
GABRE-204ENST00000462018 IQGAP2Q13576 1575 aa14.64□□□□□ -0.07
GABRE-204ENST00000462018 ARHGEF40Q8TER5 1519 aa14.64□□□□□ -0.07
GABRE-204ENST00000462018 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
GABRE-204ENST00000462018 YEATS2Q9ULM3 1422 aa14.63□□□□□ -0.07
GABRE-204ENST00000462018 SIGLEC1Q9BZZ2 1709 aa14.63□□□□□ -0.07
GABRE-204ENST00000462018 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
GABRE-204ENST00000462018 RAPGEF3O95398 923 aa14.61□□□□□ -0.07
GABRE-204ENST00000462018 KCNH8Q96L42 1107 aa14.61□□□□□ -0.07
GABRE-204ENST00000462018 IQSEC2Q5JU85 1478 aa14.61□□□□□ -0.07
GABRE-204ENST00000462018 FER1L4A9Z1Z3 1794 aa14.6□□□□□ -0.07
GABRE-204ENST00000462018 TTC37Q6PGP7 1564 aa14.6□□□□□ -0.07
GABRE-204ENST00000462018 KIAA0556O60303 1618 aa14.56□□□□□ -0.08
GABRE-204ENST00000462018 IGF1RP08069 1367 aa14.56□□□□□ -0.08
GABRE-204ENST00000462018 PTPRTO14522 1441 aa14.53□□□□□ -0.08
GABRE-204ENST00000462018 DMRT2Q9Y5R5 561 aa14.53□□□□□ -0.08
GABRE-204ENST00000462018 FANCAO15360 1455 aa14.5□□□□□ -0.09
GABRE-204ENST00000462018 ABCA9Q8IUA7 1624 aa14.5□□□□□ -0.09
GABRE-204ENST00000462018 UGGT2Q9NYU1 1516 aa14.5□□□□□ -0.09
GABRE-204ENST00000462018 RICTORQ6R327 1708 aa14.49□□□□□ -0.09
GABRE-204ENST00000462018 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
GABRE-204ENST00000462018 ABCA8O94911 1581 aa14.48□□□□□ -0.09
GABRE-204ENST00000462018 UBAP1LF5GYI3 381 aa14.48□□□□□ -0.09
GABRE-204ENST00000462018 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
GABRE-204ENST00000462018 POGZQ7Z3K3 1410 aa14.48□□□□□ -0.09
GABRE-204ENST00000462018 NEO1Q92859 1461 aa14.47□□□□□ -0.09
GABRE-204ENST00000462018 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
GABRE-204ENST00000462018 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
GABRE-204ENST00000462018 MLECQ14165 292 aa14.45□□□□□ -0.1
GABRE-204ENST00000462018 UHRF1BP1Q6BDS2 1440 aa14.45□□□□□ -0.1
GABRE-204ENST00000462018 CARMIL1Q5VZK9 1371 aa14.43□□□□□ -0.1
GABRE-204ENST00000462018 AKNAQ7Z591 1439 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms