RNA–Protein interactions for RNA: ENST00000461306.1

ITGB5-203, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-203ENST00000461306 NPM1P06748 294 aaKnown RBP eCLIP19.32■□□□□ 0.68
ITGB5-203ENST00000461306 FAM69CQ0P6D2 419 aa19.31■□□□□ 0.68
ITGB5-203ENST00000461306 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
ITGB5-203ENST00000461306 ABCC10Q5T3U5 1492 aa19.18■□□□□ 0.66
ITGB5-203ENST00000461306 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
ITGB5-203ENST00000461306 IGF1RP08069 1367 aa19.15■□□□□ 0.66
ITGB5-203ENST00000461306 DIP2BQ9P265 1576 aa19.13■□□□□ 0.65
ITGB5-203ENST00000461306 ADCY10Q96PN6 1610 aa19.13■□□□□ 0.65
ITGB5-203ENST00000461306 MAPKBP1O60336 1514 aa19.12■□□□□ 0.65
ITGB5-203ENST00000461306 KIAA0586Q9BVV6 1533 aa19.11■□□□□ 0.65
ITGB5-203ENST00000461306 KDM4FA0A1W2PPD8 638 aa19.1■□□□□ 0.65
ITGB5-203ENST00000461306 TSPOAP1O95153 1857 aa19.09■□□□□ 0.65
ITGB5-203ENST00000461306 KIF27Q86VH2 1401 aa19.08■□□□□ 0.65
ITGB5-203ENST00000461306 KDM6BO15054 1643 aa19.07■□□□□ 0.64
ITGB5-203ENST00000461306 PTPRGP23470 1445 aa19.06■□□□□ 0.64
ITGB5-203ENST00000461306 CARMIL1Q5VZK9 1371 aa19.02■□□□□ 0.64
ITGB5-203ENST00000461306 CUL7Q14999 1698 aa19.01■□□□□ 0.63
ITGB5-203ENST00000461306 TNIKQ9UKE5 1360 aa18.97■□□□□ 0.63
ITGB5-203ENST00000461306 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
ITGB5-203ENST00000461306 ILDR1Q86SU0 546 aaPredicted RBP18.94■□□□□ 0.62
ITGB5-203ENST00000461306 ASXL2Q76L83 1435 aa18.92■□□□□ 0.62
ITGB5-203ENST00000461306 ABCC2Q92887 1545 aa18.92■□□□□ 0.62
ITGB5-203ENST00000461306 PLB1Q6P1J6 1458 aa18.88■□□□□ 0.61
ITGB5-203ENST00000461306 IQGAP2Q13576 1575 aa18.88■□□□□ 0.61
ITGB5-203ENST00000461306 UACAQ9BZF9 1416 aa18.87■□□□□ 0.61
ITGB5-203ENST00000461306 PPRC1Q5VV67 1664 aaKnown RBP18.85■□□□□ 0.61
ITGB5-203ENST00000461306 DISP1Q96F81 1524 aa18.83■□□□□ 0.6
ITGB5-203ENST00000461306 UHRF1BP1LA0JNW5 1464 aa18.83■□□□□ 0.6
ITGB5-203ENST00000461306 ADGRL1O94910 1474 aa18.83■□□□□ 0.6
ITGB5-203ENST00000461306 GLI2P10070 1586 aa18.81■□□□□ 0.6
ITGB5-203ENST00000461306 COL17A1Q9UMD9 1497 aaPredicted RBP18.79■□□□□ 0.6
ITGB5-203ENST00000461306 EPRSP07814 1512 aaKnown RBP18.79■□□□□ 0.6
ITGB5-203ENST00000461306 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.6
ITGB5-203ENST00000461306 KDM5BQ9UGL1 1544 aa18.75■□□□□ 0.59
ITGB5-203ENST00000461306 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
ITGB5-203ENST00000461306 ZCCHC11Q5TAX3 1644 aaKnown RBP18.73■□□□□ 0.59
ITGB5-203ENST00000461306 UGGT2Q9NYU1 1516 aa18.73■□□□□ 0.59
ITGB5-203ENST00000461306 TEX14Q8IWB6 1497 aa18.71■□□□□ 0.59
ITGB5-203ENST00000461306 KIAA0556O60303 1618 aa18.71■□□□□ 0.58
ITGB5-203ENST00000461306 MAP3K4Q9Y6R4 1608 aa18.71■□□□□ 0.58
ITGB5-203ENST00000461306 HECW2Q9P2P5 1572 aa18.7■□□□□ 0.58
ITGB5-203ENST00000461306 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
ITGB5-203ENST00000461306 ARID3CA6NKF2 412 aa18.64■□□□□ 0.57
ITGB5-203ENST00000461306 CD109Q6YHK3 1445 aa18.64■□□□□ 0.57
ITGB5-203ENST00000461306 P3H3Q8IVL6 736 aa18.61■□□□□ 0.57
ITGB5-203ENST00000461306 GOLGA3Q08378 1498 aa18.58■□□□□ 0.57
ITGB5-203ENST00000461306 CTTNBP2Q8WZ74 1663 aa18.57■□□□□ 0.56
ITGB5-203ENST00000461306 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
ITGB5-203ENST00000461306 ABCA8O94911 1581 aa18.55■□□□□ 0.56
ITGB5-203ENST00000461306 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
ITGB5-203ENST00000461306 CFAP43Q8NDM7 1665 aa18.53■□□□□ 0.56
ITGB5-203ENST00000461306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
ITGB5-203ENST00000461306 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
ITGB5-203ENST00000461306 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
ITGB5-203ENST00000461306 RANGAP1P46060 587 aaPredicted RBP18.47■□□□□ 0.55
ITGB5-203ENST00000461306 KIF21BO75037 1637 aa18.47■□□□□ 0.55
ITGB5-203ENST00000461306 ATP10BO94823 1461 aa18.46■□□□□ 0.54
ITGB5-203ENST00000461306 RAPGEF3O95398 923 aa18.45■□□□□ 0.54
ITGB5-203ENST00000461306 ARAP3Q8WWN8 1544 aa18.41■□□□□ 0.54
ITGB5-203ENST00000461306 FBXO41Q8TF61 875 aa18.4■□□□□ 0.54
ITGB5-203ENST00000461306 ARID4BQ4LE39 1312 aaPredicted RBP18.4■□□□□ 0.54
ITGB5-203ENST00000461306 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
ITGB5-203ENST00000461306 PHLDB1Q86UU1 1377 aa18.35■□□□□ 0.53
ITGB5-203ENST00000461306 PTPRMP28827 1452 aa18.34■□□□□ 0.53
ITGB5-203ENST00000461306 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
ITGB5-203ENST00000461306 ADAMTSL3P82987 1691 aa18.32■□□□□ 0.52
ITGB5-203ENST00000461306 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
ITGB5-203ENST00000461306 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
ITGB5-203ENST00000461306 PLEKHD1A6NEE1 506 aa18.3■□□□□ 0.52
ITGB5-203ENST00000461306 NEO1Q92859 1461 aa18.3■□□□□ 0.52
ITGB5-203ENST00000461306 SAMD9Q5K651 1589 aa18.29■□□□□ 0.52
ITGB5-203ENST00000461306 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.52
ITGB5-203ENST00000461306 NUP153P49790 1475 aaKnown RBP18.26■□□□□ 0.51
ITGB5-203ENST00000461306 MADDQ8WXG6 1647 aa18.24■□□□□ 0.51
ITGB5-203ENST00000461306 BCORL1Q5H9F3 1711 aa18.23■□□□□ 0.51
ITGB5-203ENST00000461306 PCF11O94913 1555 aaKnown RBP18.23■□□□□ 0.51
ITGB5-203ENST00000461306 FRMPD1Q5SYB0 1578 aa18.23■□□□□ 0.51
ITGB5-203ENST00000461306 LMTK3Q96Q04 1460 aa18.22■□□□□ 0.51
ITGB5-203ENST00000461306 EHMT2Q96KQ7 1210 aa18.22■□□□□ 0.51
ITGB5-203ENST00000461306 AKNAQ7Z591 1439 aa18.22■□□□□ 0.51
ITGB5-203ENST00000461306 DENND4BO75064 1496 aaPredicted RBP18.21■□□□□ 0.51
ITGB5-203ENST00000461306 MLECQ14165 292 aa18.21■□□□□ 0.51
ITGB5-203ENST00000461306 HSPA2P54652 639 aa18.2■□□□□ 0.5
ITGB5-203ENST00000461306 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
ITGB5-203ENST00000461306 FANCAO15360 1455 aa18.18■□□□□ 0.5
ITGB5-203ENST00000461306 RIMS1Q86UR5 1692 aaKnown RBP18.17■□□□□ 0.5
ITGB5-203ENST00000461306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.15■□□□□ 0.5
ITGB5-203ENST00000461306 RICTORQ6R327 1708 aa18.14■□□□□ 0.49
ITGB5-203ENST00000461306 ARHGEF40Q8TER5 1519 aa18.13■□□□□ 0.49
ITGB5-203ENST00000461306 EEA1Q15075 1411 aa18.13■□□□□ 0.49
ITGB5-203ENST00000461306 POGZQ7Z3K3 1410 aa18.13■□□□□ 0.49
ITGB5-203ENST00000461306 YEATS2Q9ULM3 1422 aa18.13■□□□□ 0.49
ITGB5-203ENST00000461306 TTC37Q6PGP7 1564 aa18.11■□□□□ 0.49
ITGB5-203ENST00000461306 CFAP74Q9C0B2 1584 aa18.09■□□□□ 0.49
ITGB5-203ENST00000461306 CDK13Q14004 1512 aaKnown RBP18.09■□□□□ 0.49
ITGB5-203ENST00000461306 SCAPERQ9BY12 1400 aa18.09■□□□□ 0.49
ITGB5-203ENST00000461306 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
ITGB5-203ENST00000461306 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.49
ITGB5-203ENST00000461306 SIGLEC1Q9BZZ2 1709 aa18.06■□□□□ 0.48
ITGB5-203ENST00000461306 MYT1LQ9UL68 1186 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms