RNA–Protein interactions for RNA: ENST00000461294.2

PDGFRA-202, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-202ENST00000461294 LMTK3Q96Q04 1460 aa14.91□□□□□ -0.02
PDGFRA-202ENST00000461294 SUPT5HO00267 1087 aaKnown RBP14.86□□□□□ -0.03
PDGFRA-202ENST00000461294 CUX1P39880 1505 aa14.86□□□□□ -0.03
PDGFRA-202ENST00000461294 PRG4Q92954 1404 aaPredicted RBP14.85□□□□□ -0.03
PDGFRA-202ENST00000461294 SOCS7O14512 581 aa14.84□□□□□ -0.03
PDGFRA-202ENST00000461294 ABCA5Q8WWZ7 1642 aa14.83□□□□□ -0.04
PDGFRA-202ENST00000461294 JPH4Q96JJ6 628 aa14.81□□□□□ -0.04
PDGFRA-202ENST00000461294 ABCA10Q8WWZ4 1543 aa14.81□□□□□ -0.04
PDGFRA-202ENST00000461294 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.05
PDGFRA-202ENST00000461294 ADAMTS12P58397 1594 aa14.77□□□□□ -0.05
PDGFRA-202ENST00000461294 ILDR2Q71H61 639 aa14.75□□□□□ -0.05
PDGFRA-202ENST00000461294 FHAD1B1AJZ9 1412 aa14.74□□□□□ -0.05
PDGFRA-202ENST00000461294 PPRC1Q5VV67 1664 aaKnown RBP14.69□□□□□ -0.06
PDGFRA-202ENST00000461294 COL17A1Q9UMD9 1497 aaPredicted RBP14.69□□□□□ -0.06
PDGFRA-202ENST00000461294 TOP2BQ02880 1626 aa14.67□□□□□ -0.06
PDGFRA-202ENST00000461294 DISP3Q9P2K9 1392 aa14.65□□□□□ -0.06
PDGFRA-202ENST00000461294 GLI2P10070 1586 aa14.64□□□□□ -0.07
PDGFRA-202ENST00000461294 ERICH3Q5RHP9 1530 aa14.6□□□□□ -0.07
PDGFRA-202ENST00000461294 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
PDGFRA-202ENST00000461294 PLB1Q6P1J6 1458 aa14.59□□□□□ -0.07
PDGFRA-202ENST00000461294 ASXL2Q76L83 1435 aa14.58□□□□□ -0.08
PDGFRA-202ENST00000461294 RUSC2Q8N2Y8 1516 aa14.57□□□□□ -0.08
PDGFRA-202ENST00000461294 TEX14Q8IWB6 1497 aa14.55□□□□□ -0.08
PDGFRA-202ENST00000461294 ABCC2Q92887 1545 aa14.53□□□□□ -0.08
PDGFRA-202ENST00000461294 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.09
PDGFRA-202ENST00000461294 PTPRGP23470 1445 aa14.51□□□□□ -0.09
PDGFRA-202ENST00000461294 CERKQ8TCT0 537 aa14.51□□□□□ -0.09
PDGFRA-202ENST00000461294 EPRSP07814 1512 aaKnown RBP14.47□□□□□ -0.09
PDGFRA-202ENST00000461294 KIAA0586Q9BVV6 1533 aa14.47□□□□□ -0.09
PDGFRA-202ENST00000461294 PTPRMP28827 1452 aa14.46□□□□□ -0.09
PDGFRA-202ENST00000461294 CUL7Q14999 1698 aa14.45□□□□□ -0.1
PDGFRA-202ENST00000461294 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
PDGFRA-202ENST00000461294 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
PDGFRA-202ENST00000461294 UHRF1BP1LA0JNW5 1464 aa14.42□□□□□ -0.1
PDGFRA-202ENST00000461294 KIF21BO75037 1637 aa14.41□□□□□ -0.1
PDGFRA-202ENST00000461294 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
PDGFRA-202ENST00000461294 SPATA31D1Q6ZQQ2 1576 aa14.4□□□□□ -0.1
PDGFRA-202ENST00000461294 ADAMTSL3P82987 1691 aa14.39□□□□□ -0.11
PDGFRA-202ENST00000461294 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
PDGFRA-202ENST00000461294 UACAQ9BZF9 1416 aa14.37□□□□□ -0.11
PDGFRA-202ENST00000461294 KDM5BQ9UGL1 1544 aa14.36□□□□□ -0.11
PDGFRA-202ENST00000461294 CARMIL2Q6F5E8 1435 aa14.36□□□□□ -0.11
PDGFRA-202ENST00000461294 MAGI3Q5TCQ9 1506 aa14.33□□□□□ -0.12
PDGFRA-202ENST00000461294 HSPA2P54652 639 aa14.33□□□□□ -0.12
PDGFRA-202ENST00000461294 CD109Q6YHK3 1445 aa14.31□□□□□ -0.12
PDGFRA-202ENST00000461294 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
PDGFRA-202ENST00000461294 CFAP43Q8NDM7 1665 aa14.27□□□□□ -0.12
PDGFRA-202ENST00000461294 WDR7Q9Y4E6 1490 aa14.27□□□□□ -0.12
PDGFRA-202ENST00000461294 ARAP3Q8WWN8 1544 aa14.26□□□□□ -0.13
PDGFRA-202ENST00000461294 BCORL1Q5H9F3 1711 aa14.26□□□□□ -0.13
PDGFRA-202ENST00000461294 MADDQ8WXG6 1647 aa14.25□□□□□ -0.13
PDGFRA-202ENST00000461294 IGF1RP08069 1367 aa14.24□□□□□ -0.13
PDGFRA-202ENST00000461294 KCNH8Q96L42 1107 aa14.22□□□□□ -0.13
PDGFRA-202ENST00000461294 ARID4BQ4LE39 1312 aaPredicted RBP14.21□□□□□ -0.13
PDGFRA-202ENST00000461294 DISP1Q96F81 1524 aa14.19□□□□□ -0.14
PDGFRA-202ENST00000461294 RIMS1Q86UR5 1692 aaKnown RBP14.18□□□□□ -0.14
PDGFRA-202ENST00000461294 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
PDGFRA-202ENST00000461294 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
PDGFRA-202ENST00000461294 IQGAP2Q13576 1575 aa14.17□□□□□ -0.14
PDGFRA-202ENST00000461294 RAPGEF3O95398 923 aa14.15□□□□□ -0.14
PDGFRA-202ENST00000461294 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
PDGFRA-202ENST00000461294 YEATS2Q9ULM3 1422 aa14.12□□□□□ -0.15
PDGFRA-202ENST00000461294 CARMIL1Q5VZK9 1371 aa14.11□□□□□ -0.15
PDGFRA-202ENST00000461294 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
PDGFRA-202ENST00000461294 STRCQ7RTU9 1775 aa14.08□□□□□ -0.16
PDGFRA-202ENST00000461294 UGGT2Q9NYU1 1516 aa14.07□□□□□ -0.16
PDGFRA-202ENST00000461294 IQSEC2Q5JU85 1478 aa14.06□□□□□ -0.16
PDGFRA-202ENST00000461294 POGZQ7Z3K3 1410 aa14.05□□□□□ -0.16
PDGFRA-202ENST00000461294 KIAA0556O60303 1618 aa14.04□□□□□ -0.16
PDGFRA-202ENST00000461294 NEO1Q92859 1461 aa14.04□□□□□ -0.16
PDGFRA-202ENST00000461294 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
PDGFRA-202ENST00000461294 PREX1Q8TCU6 1659 aa14.02□□□□□ -0.16
PDGFRA-202ENST00000461294 FRMPD1Q5SYB0 1578 aa14.02□□□□□ -0.16
PDGFRA-202ENST00000461294 SETD1BQ9UPS6 1966 aaKnown RBP14.02□□□□□ -0.17
PDGFRA-202ENST00000461294 PTPRTO14522 1441 aa14.01□□□□□ -0.17
PDGFRA-202ENST00000461294 LTBP4Q8N2S1 1624 aa14.01□□□□□ -0.17
PDGFRA-202ENST00000461294 ABCA8O94911 1581 aa14□□□□□ -0.17
PDGFRA-202ENST00000461294 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
PDGFRA-202ENST00000461294 FANCAO15360 1455 aa13.99□□□□□ -0.17
PDGFRA-202ENST00000461294 ABCA9Q8IUA7 1624 aa13.99□□□□□ -0.17
PDGFRA-202ENST00000461294 TTC37Q6PGP7 1564 aa13.99□□□□□ -0.17
PDGFRA-202ENST00000461294 FER1L4A9Z1Z3 1794 aa13.97□□□□□ -0.17
PDGFRA-202ENST00000461294 MLECQ14165 292 aa13.95□□□□□ -0.18
PDGFRA-202ENST00000461294 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
PDGFRA-202ENST00000461294 UBAP1LF5GYI3 381 aa13.93□□□□□ -0.18
PDGFRA-202ENST00000461294 DENND4BO75064 1496 aaPredicted RBP13.93□□□□□ -0.18
PDGFRA-202ENST00000461294 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
PDGFRA-202ENST00000461294 CEBPAP49715 358 aaPredicted RBP13.92□□□□□ -0.18
PDGFRA-202ENST00000461294 RICTORQ6R327 1708 aa13.92□□□□□ -0.18
PDGFRA-202ENST00000461294 FHOD3Q2V2M9 1422 aa13.91□□□□□ -0.18
PDGFRA-202ENST00000461294 UHRF1BP1Q6BDS2 1440 aa13.91□□□□□ -0.18
PDGFRA-202ENST00000461294 MED1Q15648 1581 aaPredicted RBP13.91□□□□□ -0.18
PDGFRA-202ENST00000461294 ATP10BO94823 1461 aa13.9□□□□□ -0.18
PDGFRA-202ENST00000461294 GOLGA3Q08378 1498 aa13.89□□□□□ -0.19
PDGFRA-202ENST00000461294 ARHGEF12Q9NZN5 1544 aa13.87□□□□□ -0.19
PDGFRA-202ENST00000461294 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
PDGFRA-202ENST00000461294 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
PDGFRA-202ENST00000461294 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
PDGFRA-202ENST00000461294 EFCAB5A4FU69 1503 aa13.86□□□□□ -0.19
PDGFRA-202ENST00000461294 ZMYM4Q5VZL5 1548 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms