RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
SCAMP4-206ENST00000460767 ABCC10Q5T3U5 1492 aa24.44■■□□□ 1.5
SCAMP4-206ENST00000460767 DIP2BQ9P265 1576 aa24.38■■□□□ 1.49
SCAMP4-206ENST00000460767 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
SCAMP4-206ENST00000460767 ADCY10Q96PN6 1610 aa24.32■■□□□ 1.48
SCAMP4-206ENST00000460767 FAM69CQ0P6D2 419 aa24.26■■□□□ 1.47
SCAMP4-206ENST00000460767 KDM6BO15054 1643 aa24.25■■□□□ 1.47
SCAMP4-206ENST00000460767 KIAA0586Q9BVV6 1533 aa24.22■■□□□ 1.47
SCAMP4-206ENST00000460767 NPM1P06748 294 aaKnown RBP eCLIP24.22■■□□□ 1.47
SCAMP4-206ENST00000460767 CUL7Q14999 1698 aa24.18■■□□□ 1.46
SCAMP4-206ENST00000460767 KDM4FA0A1W2PPD8 638 aa24.12■■□□□ 1.45
SCAMP4-206ENST00000460767 TSPOAP1O95153 1857 aa24.08■■□□□ 1.45
SCAMP4-206ENST00000460767 IGF1RP08069 1367 aa24.05■■□□□ 1.44
SCAMP4-206ENST00000460767 GLI2P10070 1586 aa24.05■■□□□ 1.44
SCAMP4-206ENST00000460767 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
SCAMP4-206ENST00000460767 ABCC2Q92887 1545 aa24.03■■□□□ 1.44
SCAMP4-206ENST00000460767 PPRC1Q5VV67 1664 aaKnown RBP24.02■■□□□ 1.44
SCAMP4-206ENST00000460767 PTPRGP23470 1445 aa24■■□□□ 1.43
SCAMP4-206ENST00000460767 UHRF1BP1LA0JNW5 1464 aa23.98■■□□□ 1.43
SCAMP4-206ENST00000460767 PLB1Q6P1J6 1458 aa23.98■■□□□ 1.43
SCAMP4-206ENST00000460767 TNIKQ9UKE5 1360 aa23.96■■□□□ 1.43
SCAMP4-206ENST00000460767 CARMIL2Q6F5E8 1435 aa23.94■■□□□ 1.42
SCAMP4-206ENST00000460767 ASXL2Q76L83 1435 aa23.94■■□□□ 1.42
SCAMP4-206ENST00000460767 IQGAP2Q13576 1575 aa23.91■■□□□ 1.42
SCAMP4-206ENST00000460767 MAP3K4Q9Y6R4 1608 aa23.89■■□□□ 1.42
SCAMP4-206ENST00000460767 ADGRL1O94910 1474 aa23.88■■□□□ 1.41
SCAMP4-206ENST00000460767 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
SCAMP4-206ENST00000460767 UACAQ9BZF9 1416 aa23.85■■□□□ 1.41
SCAMP4-206ENST00000460767 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
SCAMP4-206ENST00000460767 EPRSP07814 1512 aaKnown RBP23.83■■□□□ 1.41
SCAMP4-206ENST00000460767 DISP1Q96F81 1524 aa23.83■■□□□ 1.41
SCAMP4-206ENST00000460767 ILDR1Q86SU0 546 aaPredicted RBP23.82■■□□□ 1.4
SCAMP4-206ENST00000460767 TEX14Q8IWB6 1497 aa23.81■■□□□ 1.4
SCAMP4-206ENST00000460767 COL17A1Q9UMD9 1497 aaPredicted RBP23.8■■□□□ 1.4
SCAMP4-206ENST00000460767 UGGT2Q9NYU1 1516 aa23.79■■□□□ 1.4
SCAMP4-206ENST00000460767 ZCCHC11Q5TAX3 1644 aaKnown RBP23.77■■□□□ 1.4
SCAMP4-206ENST00000460767 HECW2Q9P2P5 1572 aa23.74■■□□□ 1.39
SCAMP4-206ENST00000460767 KIAA0556O60303 1618 aa23.73■■□□□ 1.39
SCAMP4-206ENST00000460767 WDR7Q9Y4E6 1490 aa23.67■■□□□ 1.38
SCAMP4-206ENST00000460767 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
SCAMP4-206ENST00000460767 RAPGEF2Q9Y4G8 1499 aa23.65■■□□□ 1.38
SCAMP4-206ENST00000460767 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.37
SCAMP4-206ENST00000460767 CFAP43Q8NDM7 1665 aa23.64■■□□□ 1.37
SCAMP4-206ENST00000460767 CTTNBP2Q8WZ74 1663 aa23.56■■□□□ 1.36
SCAMP4-206ENST00000460767 ABCA8O94911 1581 aa23.55■■□□□ 1.36
SCAMP4-206ENST00000460767 GOLGA3Q08378 1498 aa23.51■■□□□ 1.35
SCAMP4-206ENST00000460767 CD109Q6YHK3 1445 aa23.5■■□□□ 1.35
SCAMP4-206ENST00000460767 ARAP3Q8WWN8 1544 aa23.46■■□□□ 1.35
SCAMP4-206ENST00000460767 KIF21BO75037 1637 aa23.45■■□□□ 1.34
SCAMP4-206ENST00000460767 ADAMTSL3P82987 1691 aa23.37■■□□□ 1.33
SCAMP4-206ENST00000460767 PHLDB1Q86UU1 1377 aa23.37■■□□□ 1.33
SCAMP4-206ENST00000460767 ABCA9Q8IUA7 1624 aa23.35■■□□□ 1.33
SCAMP4-206ENST00000460767 PRXQ9BXM0 1461 aa23.33■■□□□ 1.33
SCAMP4-206ENST00000460767 FBXO41Q8TF61 875 aa23.31■■□□□ 1.32
SCAMP4-206ENST00000460767 PTPRMP28827 1452 aa23.3■■□□□ 1.32
SCAMP4-206ENST00000460767 KCNH8Q96L42 1107 aa23.29■■□□□ 1.32
SCAMP4-206ENST00000460767 NEO1Q92859 1461 aa23.27■■□□□ 1.32
SCAMP4-206ENST00000460767 ATP10BO94823 1461 aa23.26■■□□□ 1.31
SCAMP4-206ENST00000460767 BCORL1Q5H9F3 1711 aa23.25■■□□□ 1.31
SCAMP4-206ENST00000460767 FRMPD1Q5SYB0 1578 aa23.23■■□□□ 1.31
SCAMP4-206ENST00000460767 SAMD9Q5K651 1589 aa23.22■■□□□ 1.31
SCAMP4-206ENST00000460767 PCF11O94913 1555 aaKnown RBP23.21■■□□□ 1.31
SCAMP4-206ENST00000460767 MADDQ8WXG6 1647 aa23.18■■□□□ 1.3
SCAMP4-206ENST00000460767 RAPGEF6Q8TEU7 1601 aa23.17■■□□□ 1.3
SCAMP4-206ENST00000460767 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
SCAMP4-206ENST00000460767 ARHGEF40Q8TER5 1519 aa23.16■■□□□ 1.3
SCAMP4-206ENST00000460767 FAM9AQ8IZU1 332 aaPredicted RBP23.15■■□□□ 1.3
SCAMP4-206ENST00000460767 RICTORQ6R327 1708 aa23.1■■□□□ 1.29
SCAMP4-206ENST00000460767 RAPGEF3O95398 923 aa23.08■■□□□ 1.29
SCAMP4-206ENST00000460767 CFAP74Q9C0B2 1584 aa23.08■■□□□ 1.29
SCAMP4-206ENST00000460767 NUP153P49790 1475 aaKnown RBP23.06■■□□□ 1.28
SCAMP4-206ENST00000460767 ZMYM4Q5VZL5 1548 aa23.06■■□□□ 1.28
SCAMP4-206ENST00000460767 RIMS1Q86UR5 1692 aaKnown RBP23.06■■□□□ 1.28
SCAMP4-206ENST00000460767 FHOD3Q2V2M9 1422 aa23.05■■□□□ 1.28
SCAMP4-206ENST00000460767 DENND4BO75064 1496 aaPredicted RBP23.03■■□□□ 1.28
SCAMP4-206ENST00000460767 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
SCAMP4-206ENST00000460767 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
SCAMP4-206ENST00000460767 FANCAO15360 1455 aa22.99■■□□□ 1.27
SCAMP4-206ENST00000460767 EFCAB5A4FU69 1503 aa22.98■■□□□ 1.27
SCAMP4-206ENST00000460767 MAGI2Q86UL8 1455 aa22.98■■□□□ 1.27
SCAMP4-206ENST00000460767 P3H3Q8IVL6 736 aa22.97■■□□□ 1.27
SCAMP4-206ENST00000460767 ARID4BQ4LE39 1312 aaPredicted RBP22.97■■□□□ 1.27
SCAMP4-206ENST00000460767 POGZQ7Z3K3 1410 aa22.97■■□□□ 1.27
SCAMP4-206ENST00000460767 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
SCAMP4-206ENST00000460767 EEA1Q15075 1411 aa22.96■■□□□ 1.27
SCAMP4-206ENST00000460767 TTC37Q6PGP7 1564 aa22.95■■□□□ 1.26
SCAMP4-206ENST00000460767 ZFYVE16Q7Z3T8 1539 aa22.95■■□□□ 1.26
SCAMP4-206ENST00000460767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.95■■□□□ 1.266e-6■■■■■ 38.2
SCAMP4-206ENST00000460767 SIGLEC1Q9BZZ2 1709 aa22.94■■□□□ 1.26
SCAMP4-206ENST00000460767 FER1L4A9Z1Z3 1794 aa22.89■■□□□ 1.26
SCAMP4-206ENST00000460767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.88■■□□□ 1.25
SCAMP4-206ENST00000460767 HNRNPUL2Q1KMD3 747 aaKnown RBP22.88■■□□□ 1.25
SCAMP4-206ENST00000460767 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
SCAMP4-206ENST00000460767 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
SCAMP4-206ENST00000460767 YEATS2Q9ULM3 1422 aa22.87■■□□□ 1.25
SCAMP4-206ENST00000460767 HECW1Q76N89 1606 aa22.86■■□□□ 1.25
SCAMP4-206ENST00000460767 ARHGEF12Q9NZN5 1544 aa22.85■■□□□ 1.25
SCAMP4-206ENST00000460767 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.24
SCAMP4-206ENST00000460767 HSPA2P54652 639 aa22.81■■□□□ 1.24
SCAMP4-206ENST00000460767 CERKQ8TCT0 537 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms