RNA–Protein interactions for RNA: ENST00000460675.5

COMMD6-206, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-206ENST00000460675 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
COMMD6-206ENST00000460675 KIF13AQ9H1H9 1805 aa18.8■□□□□ 0.6
COMMD6-206ENST00000460675 NPM1P06748 294 aaKnown RBP eCLIP18.78■□□□□ 0.6
COMMD6-206ENST00000460675 FAM69CQ0P6D2 419 aa18.77■□□□□ 0.6
COMMD6-206ENST00000460675 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
COMMD6-206ENST00000460675 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
COMMD6-206ENST00000460675 RUSC2Q8N2Y8 1516 aa18.67■□□□□ 0.58
COMMD6-206ENST00000460675 MAPKBP1O60336 1514 aa18.64■□□□□ 0.57
COMMD6-206ENST00000460675 DIP2BQ9P265 1576 aa18.62■□□□□ 0.57
COMMD6-206ENST00000460675 ADCY10Q96PN6 1610 aa18.62■□□□□ 0.57
COMMD6-206ENST00000460675 KIAA0586Q9BVV6 1533 aa18.58■□□□□ 0.56
COMMD6-206ENST00000460675 KDM6BO15054 1643 aa18.57■□□□□ 0.56
COMMD6-206ENST00000460675 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
COMMD6-206ENST00000460675 KDM4FA0A1W2PPD8 638 aa18.57■□□□□ 0.56
COMMD6-206ENST00000460675 TSPOAP1O95153 1857 aa18.56■□□□□ 0.56
COMMD6-206ENST00000460675 IGF1RP08069 1367 aa18.55■□□□□ 0.56
COMMD6-206ENST00000460675 PTPRGP23470 1445 aa18.51■□□□□ 0.55
COMMD6-206ENST00000460675 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
COMMD6-206ENST00000460675 CUL7Q14999 1698 aa18.49■□□□□ 0.55
COMMD6-206ENST00000460675 CARMIL2Q6F5E8 1435 aa18.44■□□□□ 0.54
COMMD6-206ENST00000460675 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
COMMD6-206ENST00000460675 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
COMMD6-206ENST00000460675 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
COMMD6-206ENST00000460675 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
COMMD6-206ENST00000460675 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.54
COMMD6-206ENST00000460675 ILDR1Q86SU0 546 aaPredicted RBP18.36■□□□□ 0.53
COMMD6-206ENST00000460675 GLI2P10070 1586 aa18.34■□□□□ 0.53
COMMD6-206ENST00000460675 IQGAP2Q13576 1575 aa18.34■□□□□ 0.53
COMMD6-206ENST00000460675 UACAQ9BZF9 1416 aa18.34■□□□□ 0.53
COMMD6-206ENST00000460675 PPRC1Q5VV67 1664 aaKnown RBP18.33■□□□□ 0.52
COMMD6-206ENST00000460675 UHRF1BP1LA0JNW5 1464 aa18.33■□□□□ 0.52
COMMD6-206ENST00000460675 ADGRL1O94910 1474 aa18.32■□□□□ 0.52
COMMD6-206ENST00000460675 DISP1Q96F81 1524 aa18.28■□□□□ 0.52
COMMD6-206ENST00000460675 EPRSP07814 1512 aaKnown RBP18.28■□□□□ 0.52
COMMD6-206ENST00000460675 COL17A1Q9UMD9 1497 aaPredicted RBP18.27■□□□□ 0.52
COMMD6-206ENST00000460675 KDM5BQ9UGL1 1544 aa18.25■□□□□ 0.51
COMMD6-206ENST00000460675 TEX14Q8IWB6 1497 aa18.25■□□□□ 0.51
COMMD6-206ENST00000460675 MAP3K4Q9Y6R4 1608 aa18.23■□□□□ 0.51
COMMD6-206ENST00000460675 ZCCHC11Q5TAX3 1644 aaKnown RBP18.22■□□□□ 0.51
COMMD6-206ENST00000460675 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
COMMD6-206ENST00000460675 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
COMMD6-206ENST00000460675 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
COMMD6-206ENST00000460675 KCNH8Q96L42 1107 aa18.16■□□□□ 0.5
COMMD6-206ENST00000460675 WDR7Q9Y4E6 1490 aa18.15■□□□□ 0.5
COMMD6-206ENST00000460675 HECW2Q9P2P5 1572 aa18.15■□□□□ 0.5
COMMD6-206ENST00000460675 PHF23Q9BUL5 403 aaPredicted RBP18.12■□□□□ 0.49
COMMD6-206ENST00000460675 CD109Q6YHK3 1445 aa18.11■□□□□ 0.49
COMMD6-206ENST00000460675 MAGI3Q5TCQ9 1506 aa18.07■□□□□ 0.48
COMMD6-206ENST00000460675 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
COMMD6-206ENST00000460675 CFAP43Q8NDM7 1665 aa18.06■□□□□ 0.48
COMMD6-206ENST00000460675 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
COMMD6-206ENST00000460675 ABCA8O94911 1581 aa18.03■□□□□ 0.48
COMMD6-206ENST00000460675 ARID3CA6NKF2 412 aa18.02■□□□□ 0.48
COMMD6-206ENST00000460675 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
COMMD6-206ENST00000460675 KIF21BO75037 1637 aa17.98■□□□□ 0.47
COMMD6-206ENST00000460675 P3H3Q8IVL6 736 aa17.97■□□□□ 0.47
COMMD6-206ENST00000460675 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
COMMD6-206ENST00000460675 ATP10BO94823 1461 aa17.91■□□□□ 0.46
COMMD6-206ENST00000460675 PRXQ9BXM0 1461 aa17.91■□□□□ 0.46
COMMD6-206ENST00000460675 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
COMMD6-206ENST00000460675 FBXO41Q8TF61 875 aa17.9■□□□□ 0.46
COMMD6-206ENST00000460675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
COMMD6-206ENST00000460675 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
COMMD6-206ENST00000460675 PHLDB1Q86UU1 1377 aa17.89■□□□□ 0.45
COMMD6-206ENST00000460675 ARID4BQ4LE39 1312 aaPredicted RBP17.87■□□□□ 0.45
COMMD6-206ENST00000460675 PTPRMP28827 1452 aa17.87■□□□□ 0.45
COMMD6-206ENST00000460675 ABCA9Q8IUA7 1624 aa17.85■□□□□ 0.45
COMMD6-206ENST00000460675 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.45
COMMD6-206ENST00000460675 NEO1Q92859 1461 aa17.82■□□□□ 0.44
COMMD6-206ENST00000460675 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
COMMD6-206ENST00000460675 RAPGEF6Q8TEU7 1601 aa17.79■□□□□ 0.44
COMMD6-206ENST00000460675 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.44
COMMD6-206ENST00000460675 BCORL1Q5H9F3 1711 aa17.77■□□□□ 0.44
COMMD6-206ENST00000460675 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
COMMD6-206ENST00000460675 SAMD9Q5K651 1589 aa17.75■□□□□ 0.43
COMMD6-206ENST00000460675 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
COMMD6-206ENST00000460675 FRMPD1Q5SYB0 1578 aa17.74■□□□□ 0.43
COMMD6-206ENST00000460675 PLEKHD1A6NEE1 506 aa17.74■□□□□ 0.43
COMMD6-206ENST00000460675 PCF11O94913 1555 aaKnown RBP17.74■□□□□ 0.43
COMMD6-206ENST00000460675 NUP153P49790 1475 aaKnown RBP17.72■□□□□ 0.43
COMMD6-206ENST00000460675 DENND4BO75064 1496 aaPredicted RBP17.71■□□□□ 0.43
COMMD6-206ENST00000460675 LMTK3Q96Q04 1460 aa17.71■□□□□ 0.43
COMMD6-206ENST00000460675 HSPA2P54652 639 aa17.7■□□□□ 0.42
COMMD6-206ENST00000460675 RIMS1Q86UR5 1692 aaKnown RBP17.7■□□□□ 0.42
COMMD6-206ENST00000460675 AKNAQ7Z591 1439 aa17.69■□□□□ 0.42
COMMD6-206ENST00000460675 FHOD3Q2V2M9 1422 aa17.68■□□□□ 0.42
COMMD6-206ENST00000460675 ARHGEF40Q8TER5 1519 aa17.67■□□□□ 0.42
COMMD6-206ENST00000460675 FANCAO15360 1455 aa17.67■□□□□ 0.42
COMMD6-206ENST00000460675 POGZQ7Z3K3 1410 aa17.66■□□□□ 0.42
COMMD6-206ENST00000460675 RICTORQ6R327 1708 aa17.66■□□□□ 0.42
COMMD6-206ENST00000460675 MLECQ14165 292 aa17.65■□□□□ 0.42
COMMD6-206ENST00000460675 CFAP74Q9C0B2 1584 aa17.63■□□□□ 0.41
COMMD6-206ENST00000460675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.62■□□□□ 0.41
COMMD6-206ENST00000460675 YEATS2Q9ULM3 1422 aa17.61■□□□□ 0.41
COMMD6-206ENST00000460675 ZFYVE16Q7Z3T8 1539 aa17.61■□□□□ 0.41
COMMD6-206ENST00000460675 EFCAB5A4FU69 1503 aa17.59■□□□□ 0.41
COMMD6-206ENST00000460675 TTC37Q6PGP7 1564 aa17.58■□□□□ 0.41
COMMD6-206ENST00000460675 FOXD1Q16676 465 aa17.58■□□□□ 0.4
COMMD6-206ENST00000460675 CERKQ8TCT0 537 aa17.58■□□□□ 0.4
COMMD6-206ENST00000460675 ZMYM4Q5VZL5 1548 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms