RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 EIF4G3O43432 1585 aaKnown RBP12.52□□□□□ -0.4
SFPQ-202ENST00000460428 MAP3K1Q13233 1512 aa12.52□□□□□ -0.41
SFPQ-202ENST00000460428 MAGI1Q96QZ7 1491 aaPredicted RBP12.51□□□□□ -0.41
SFPQ-202ENST00000460428 SAMD9Q5K651 1589 aa12.49□□□□□ -0.41
SFPQ-202ENST00000460428 SNAPC4Q5SXM2 1469 aa12.46□□□□□ -0.41
SFPQ-202ENST00000460428 APLP2Q06481 763 aa12.46□□□□□ -0.41
SFPQ-202ENST00000460428 SYNJ2O15056 1496 aa12.45□□□□□ -0.42
SFPQ-202ENST00000460428 GRIN2AQ12879 1464 aa12.45□□□□□ -0.42
SFPQ-202ENST00000460428 KIAA0586Q9BVV6 1533 aa12.44□□□□□ -0.42
SFPQ-202ENST00000460428 RANGAP1P46060 587 aaPredicted RBP12.44□□□□□ -0.42
SFPQ-202ENST00000460428 UGGT2Q9NYU1 1516 aa12.43□□□□□ -0.42
SFPQ-202ENST00000460428 PPARGC1BQ86YN6 1023 aaKnown RBP12.43□□□□□ -0.42
SFPQ-202ENST00000460428 FMN1Q68DA7 1419 aa12.43□□□□□ -0.42
SFPQ-202ENST00000460428 CASKIN1Q8WXD9 1431 aa12.43□□□□□ -0.42
SFPQ-202ENST00000460428 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
SFPQ-202ENST00000460428 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.42
SFPQ-202ENST00000460428 FHOD3Q2V2M9 1422 aa12.4□□□□□ -0.42
SFPQ-202ENST00000460428 HRCP23327 699 aa12.4□□□□□ -0.42
SFPQ-202ENST00000460428 TIAM1Q13009 1591 aa12.39□□□□□ -0.43
SFPQ-202ENST00000460428 NUP160Q12769 1436 aa12.39□□□□□ -0.43
SFPQ-202ENST00000460428 CFAP43Q8NDM7 1665 aa12.37□□□□□ -0.43
SFPQ-202ENST00000460428 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
SFPQ-202ENST00000460428 KANK4Q5T7N3 995 aaPredicted RBP12.36□□□□□ -0.43
SFPQ-202ENST00000460428 LRRC9Q6ZRR7 1453 aa12.35□□□□□ -0.43
SFPQ-202ENST00000460428 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
SFPQ-202ENST00000460428 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
SFPQ-202ENST00000460428 RRBP1Q9P2E9 1410 aaKnown RBP12.34□□□□□ -0.43
SFPQ-202ENST00000460428 DISP1Q96F81 1524 aa12.33□□□□□ -0.44
SFPQ-202ENST00000460428 P3H3Q8IVL6 736 aa12.33□□□□□ -0.44
SFPQ-202ENST00000460428 KIAA0556O60303 1618 aa12.31□□□□□ -0.44
SFPQ-202ENST00000460428 CCDC18Q5T9S5 1454 aa12.27□□□□□ -0.44
SFPQ-202ENST00000460428 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.45
SFPQ-202ENST00000460428 LRRIQ1Q96JM4 1722 aa12.26□□□□□ -0.45
SFPQ-202ENST00000460428 JPH4Q96JJ6 628 aa12.26□□□□□ -0.45
SFPQ-202ENST00000460428 TTBK1Q5TCY1 1321 aaPredicted RBP12.26□□□□□ -0.45
SFPQ-202ENST00000460428 HECW1Q76N89 1606 aa12.26□□□□□ -0.45
SFPQ-202ENST00000460428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
SFPQ-202ENST00000460428 CARMIL2Q6F5E8 1435 aa12.24□□□□□ -0.45
SFPQ-202ENST00000460428 CCNB3Q8WWL7 1395 aa12.23□□□□□ -0.45
SFPQ-202ENST00000460428 EPRSP07814 1512 aaKnown RBP12.22□□□□□ -0.45
SFPQ-202ENST00000460428 CHD1O14646 1710 aa12.22□□□□□ -0.45
SFPQ-202ENST00000460428 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
SFPQ-202ENST00000460428 ARHGEF11O15085 1522 aa12.21□□□□□ -0.45
SFPQ-202ENST00000460428 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.45
SFPQ-202ENST00000460428 FBLN2P98095 1184 aa12.21□□□□□ -0.45
SFPQ-202ENST00000460428 PHLDB1Q86UU1 1377 aa12.2□□□□□ -0.46
SFPQ-202ENST00000460428 RAPGEF6Q8TEU7 1601 aa12.19□□□□□ -0.46
SFPQ-202ENST00000460428 NUP153P49790 1475 aaKnown RBP12.18□□□□□ -0.46
SFPQ-202ENST00000460428 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
SFPQ-202ENST00000460428 ATP1B4Q9UN42 357 aaPredicted RBP12.17□□□□□ -0.46
SFPQ-202ENST00000460428 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
SFPQ-202ENST00000460428 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
SFPQ-202ENST00000460428 NCOA2Q15596 1464 aa12.16□□□□□ -0.46
SFPQ-202ENST00000460428 ABCA8O94911 1581 aa12.16□□□□□ -0.46
SFPQ-202ENST00000460428 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
SFPQ-202ENST00000460428 PRG4Q92954 1404 aaPredicted RBP12.14□□□□□ -0.47
SFPQ-202ENST00000460428 FGD6Q6ZV73 1430 aa12.13□□□□□ -0.47
SFPQ-202ENST00000460428 HNRNPUL2Q1KMD3 747 aaKnown RBP12.13□□□□□ -0.47
SFPQ-202ENST00000460428 MYOM3Q5VTT5 1437 aa12.12□□□□□ -0.47
SFPQ-202ENST00000460428 CDK13Q14004 1512 aaKnown RBP12.12□□□□□ -0.47
SFPQ-202ENST00000460428 PLB1Q6P1J6 1458 aa12.11□□□□□ -0.47
SFPQ-202ENST00000460428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
SFPQ-202ENST00000460428 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
SFPQ-202ENST00000460428 TCOF1Q13428 1488 aaKnown RBP12.1□□□□□ -0.47
SFPQ-202ENST00000460428 CDK11AQ9UQ88 783 aaPredicted RBP12.1□□□□□ -0.47
SFPQ-202ENST00000460428 PTPRGP23470 1445 aa12.1□□□□□ -0.47
SFPQ-202ENST00000460428 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
SFPQ-202ENST00000460428 CLSPNQ9HAW4 1339 aa12.09□□□□□ -0.47
SFPQ-202ENST00000460428 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
SFPQ-202ENST00000460428 TROQ12816 1431 aaPredicted RBP12.08□□□□□ -0.48
SFPQ-202ENST00000460428 ATP10BO94823 1461 aa12.07□□□□□ -0.48
SFPQ-202ENST00000460428 PTPN23Q9H3S7 1636 aa12.04□□□□□ -0.48
SFPQ-202ENST00000460428 UACAQ9BZF9 1416 aa12.04□□□□□ -0.48
SFPQ-202ENST00000460428 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
SFPQ-202ENST00000460428 UHRF1BP1LA0JNW5 1464 aa12.03□□□□□ -0.48
SFPQ-202ENST00000460428 FAM50AQ14320 339 aaKnown RBP12.02□□□□□ -0.49
SFPQ-202ENST00000460428 DHX57Q6P158 1386 aaKnown RBP12.02□□□□□ -0.49
SFPQ-202ENST00000460428 ABCC2Q92887 1545 aa12.01□□□□□ -0.49
SFPQ-202ENST00000460428 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
SFPQ-202ENST00000460428 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
SFPQ-202ENST00000460428 PLEKHD1A6NEE1 506 aa12□□□□□ -0.49
SFPQ-202ENST00000460428 PTPRKQ15262 1439 aa12□□□□□ -0.49
SFPQ-202ENST00000460428 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
SFPQ-202ENST00000460428 RAB3GAP2Q9H2M9 1393 aa11.99□□□□□ -0.49
SFPQ-202ENST00000460428 HFM1A2PYH4 1435 aa11.99□□□□□ -0.49
SFPQ-202ENST00000460428 GPATCH8Q9UKJ3 1502 aaKnown RBP11.99□□□□□ -0.49
SFPQ-202ENST00000460428 ITSN2Q9NZM3 1697 aa11.98□□□□□ -0.49
SFPQ-202ENST00000460428 KIF14Q15058 1648 aa11.97□□□□□ -0.49
SFPQ-202ENST00000460428 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.49
SFPQ-202ENST00000460428 ACIN1Q9UKV3 1341 aaKnown RBP11.96□□□□□ -0.49
SFPQ-202ENST00000460428 ITGAEP38570 1179 aa11.95□□□□□ -0.5
SFPQ-202ENST00000460428 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
SFPQ-202ENST00000460428 NAIPQ13075 1403 aa11.94□□□□□ -0.5
SFPQ-202ENST00000460428 ROCK1Q13464 1354 aa11.94□□□□□ -0.5
SFPQ-202ENST00000460428 DNMT1P26358 1616 aaKnown RBP11.94□□□□□ -0.5
SFPQ-202ENST00000460428 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
SFPQ-202ENST00000460428 ABCC5O15440 1437 aa11.93□□□□□ -0.5
SFPQ-202ENST00000460428 CDC42BPAQ5VT25 1732 aa11.92□□□□□ -0.5
SFPQ-202ENST00000460428 DAPK1P53355 1430 aa11.92□□□□□ -0.5
SFPQ-202ENST00000460428 GCC2Q8IWJ2 1684 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms