RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 HECW2Q9P2P5 1572 aa25.52■■□□□ 1.68
PCOLCE-202ENST00000460002 ADGRL1O94910 1474 aa25.49■■□□□ 1.67
PCOLCE-202ENST00000460002 NPM1P06748 294 aaKnown RBP eCLIP25.49■■□□□ 1.67
PCOLCE-202ENST00000460002 TSPOAP1O95153 1857 aa25.42■■□□□ 1.66
PCOLCE-202ENST00000460002 FHAD1B1AJZ9 1412 aa25.41■■□□□ 1.66
PCOLCE-202ENST00000460002 JPH4Q96JJ6 628 aa25.41■■□□□ 1.66
PCOLCE-202ENST00000460002 ADCY10Q96PN6 1610 aa25.39■■□□□ 1.66
PCOLCE-202ENST00000460002 FBXO41Q8TF61 875 aa25.38■■□□□ 1.65
PCOLCE-202ENST00000460002 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
PCOLCE-202ENST00000460002 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
PCOLCE-202ENST00000460002 RUSC2Q8N2Y8 1516 aa25.21■■□□□ 1.63
PCOLCE-202ENST00000460002 PPRC1Q5VV67 1664 aaKnown RBP25.17■■□□□ 1.62
PCOLCE-202ENST00000460002 COL17A1Q9UMD9 1497 aaPredicted RBP25.17■■□□□ 1.62
PCOLCE-202ENST00000460002 GLI2P10070 1586 aa25.07■■□□□ 1.6
PCOLCE-202ENST00000460002 LMTK3Q96Q04 1460 aa25.07■■□□□ 1.6
PCOLCE-202ENST00000460002 ASXL2Q76L83 1435 aa25.03■■□□□ 1.6
PCOLCE-202ENST00000460002 PLB1Q6P1J6 1458 aa24.99■■□□□ 1.59
PCOLCE-202ENST00000460002 ABCC2Q92887 1545 aa24.98■■□□□ 1.59
PCOLCE-202ENST00000460002 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
PCOLCE-202ENST00000460002 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
PCOLCE-202ENST00000460002 PTPRGP23470 1445 aa24.95■■□□□ 1.59
PCOLCE-202ENST00000460002 KIAA0586Q9BVV6 1533 aa24.95■■□□□ 1.58
PCOLCE-202ENST00000460002 TTBK1Q5TCY1 1321 aaPredicted RBP24.91■■□□□ 1.58
PCOLCE-202ENST00000460002 MAP3K4Q9Y6R4 1608 aa24.89■■□□□ 1.57
PCOLCE-202ENST00000460002 TEX14Q8IWB6 1497 aa24.89■■□□□ 1.57
PCOLCE-202ENST00000460002 EPRSP07814 1512 aaKnown RBP24.87■■□□□ 1.57
PCOLCE-202ENST00000460002 ILDR2Q71H61 639 aa24.86■■□□□ 1.57
PCOLCE-202ENST00000460002 SOCS7O14512 581 aa24.85■■□□□ 1.57
PCOLCE-202ENST00000460002 CUL7Q14999 1698 aa24.84■■□□□ 1.57
PCOLCE-202ENST00000460002 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
PCOLCE-202ENST00000460002 UHRF1BP1LA0JNW5 1464 aa24.79■■□□□ 1.56
PCOLCE-202ENST00000460002 UACAQ9BZF9 1416 aa24.72■■□□□ 1.55
PCOLCE-202ENST00000460002 CARMIL2Q6F5E8 1435 aa24.71■■□□□ 1.55
PCOLCE-202ENST00000460002 KDM5BQ9UGL1 1544 aa24.71■■□□□ 1.55
PCOLCE-202ENST00000460002 DISP3Q9P2K9 1392 aa24.7■■□□□ 1.55
PCOLCE-202ENST00000460002 KIF21BO75037 1637 aa24.7■■□□□ 1.54
PCOLCE-202ENST00000460002 PTPRMP28827 1452 aa24.69■■□□□ 1.54
PCOLCE-202ENST00000460002 IGF1RP08069 1367 aa24.67■■□□□ 1.54
PCOLCE-202ENST00000460002 ZCCHC11Q5TAX3 1644 aaKnown RBP24.62■■□□□ 1.53
PCOLCE-202ENST00000460002 PCF11O94913 1555 aaKnown RBP24.62■■□□□ 1.53
PCOLCE-202ENST00000460002 MAGI3Q5TCQ9 1506 aa24.59■■□□□ 1.53
PCOLCE-202ENST00000460002 ADAMTSL3P82987 1691 aa24.58■■□□□ 1.53
PCOLCE-202ENST00000460002 WDR7Q9Y4E6 1490 aa24.58■■□□□ 1.52
PCOLCE-202ENST00000460002 CD109Q6YHK3 1445 aa24.56■■□□□ 1.52
PCOLCE-202ENST00000460002 CERKQ8TCT0 537 aa24.56■■□□□ 1.52
PCOLCE-202ENST00000460002 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
PCOLCE-202ENST00000460002 IQGAP2Q13576 1575 aa24.51■■□□□ 1.51
PCOLCE-202ENST00000460002 CFAP43Q8NDM7 1665 aa24.47■■□□□ 1.51
PCOLCE-202ENST00000460002 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
PCOLCE-202ENST00000460002 HSPA2P54652 639 aa24.46■■□□□ 1.51
PCOLCE-202ENST00000460002 CARMIL1Q5VZK9 1371 aa24.44■■□□□ 1.5
PCOLCE-202ENST00000460002 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
PCOLCE-202ENST00000460002 ARAP3Q8WWN8 1544 aa24.43■■□□□ 1.5
PCOLCE-202ENST00000460002 MADDQ8WXG6 1647 aa24.42■■□□□ 1.5
PCOLCE-202ENST00000460002 SPATA31D1Q6ZQQ2 1576 aa24.39■■□□□ 1.5
PCOLCE-202ENST00000460002 BCORL1Q5H9F3 1711 aa24.38■■□□□ 1.49
PCOLCE-202ENST00000460002 UGGT2Q9NYU1 1516 aa24.34■■□□□ 1.49
PCOLCE-202ENST00000460002 KIAA0556O60303 1618 aa24.32■■□□□ 1.48
PCOLCE-202ENST00000460002 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
PCOLCE-202ENST00000460002 ARID4BQ4LE39 1312 aaPredicted RBP24.3■■□□□ 1.48
PCOLCE-202ENST00000460002 RAPGEF3O95398 923 aa24.29■■□□□ 1.48
PCOLCE-202ENST00000460002 RIMS1Q86UR5 1692 aaKnown RBP24.27■■□□□ 1.48
PCOLCE-202ENST00000460002 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
PCOLCE-202ENST00000460002 PHLDB1Q86UU1 1377 aa24.21■■□□□ 1.47
PCOLCE-202ENST00000460002 ABCA8O94911 1581 aa24.2■■□□□ 1.46
PCOLCE-202ENST00000460002 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
PCOLCE-202ENST00000460002 NEO1Q92859 1461 aa24.1■■□□□ 1.45
PCOLCE-202ENST00000460002 ABCA9Q8IUA7 1624 aa24.1■■□□□ 1.45
PCOLCE-202ENST00000460002 ARHGEF40Q8TER5 1519 aa24.1■■□□□ 1.45
PCOLCE-202ENST00000460002 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
PCOLCE-202ENST00000460002 ARID3CA6NKF2 412 aa24.05■■□□□ 1.44
PCOLCE-202ENST00000460002 YEATS2Q9ULM3 1422 aa24.04■■□□□ 1.44
PCOLCE-202ENST00000460002 ATP10BO94823 1461 aa24.01■■□□□ 1.43
PCOLCE-202ENST00000460002 POGZQ7Z3K3 1410 aa24.01■■□□□ 1.43
PCOLCE-202ENST00000460002 GOLGA3Q08378 1498 aa24■■□□□ 1.43
PCOLCE-202ENST00000460002 SIGLEC1Q9BZZ2 1709 aa23.99■■□□□ 1.43
PCOLCE-202ENST00000460002 DMRT2Q9Y5R5 561 aa23.99■■□□□ 1.43
PCOLCE-202ENST00000460002 FANCAO15360 1455 aa23.99■■□□□ 1.43
PCOLCE-202ENST00000460002 STRCQ7RTU9 1775 aa23.98■■□□□ 1.43
PCOLCE-202ENST00000460002 TTC37Q6PGP7 1564 aa23.97■■□□□ 1.43
PCOLCE-202ENST00000460002 AKNAQ7Z591 1439 aa23.94■■□□□ 1.42
PCOLCE-202ENST00000460002 MLECQ14165 292 aa23.94■■□□□ 1.42
PCOLCE-202ENST00000460002 DENND4BO75064 1496 aaPredicted RBP23.94■■□□□ 1.42
PCOLCE-202ENST00000460002 RICTORQ6R327 1708 aa23.93■■□□□ 1.42
PCOLCE-202ENST00000460002 PREX1Q8TCU6 1659 aa23.92■■□□□ 1.42
PCOLCE-202ENST00000460002 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
PCOLCE-202ENST00000460002 FER1L4A9Z1Z3 1794 aa23.91■■□□□ 1.42
PCOLCE-202ENST00000460002 LTBP4Q8N2S1 1624 aa23.89■■□□□ 1.42
PCOLCE-202ENST00000460002 CTTNBP2Q8WZ74 1663 aa23.87■■□□□ 1.41
PCOLCE-202ENST00000460002 CEBPAP49715 358 aaPredicted RBP23.87■■□□□ 1.41
PCOLCE-202ENST00000460002 PTPRTO14522 1441 aa23.86■■□□□ 1.41
PCOLCE-202ENST00000460002 ZFYVE16Q7Z3T8 1539 aa23.86■■□□□ 1.41
PCOLCE-202ENST00000460002 ZMYM4Q5VZL5 1548 aa23.85■■□□□ 1.41
PCOLCE-202ENST00000460002 IQSEC2Q5JU85 1478 aa23.85■■□□□ 1.41
PCOLCE-202ENST00000460002 EFCAB5A4FU69 1503 aa23.82■■□□□ 1.4
PCOLCE-202ENST00000460002 ARHGEF12Q9NZN5 1544 aa23.82■■□□□ 1.4
PCOLCE-202ENST00000460002 UHRF1BP1Q6BDS2 1440 aa23.8■■□□□ 1.4
PCOLCE-202ENST00000460002 MAGI2Q86UL8 1455 aa23.77■■□□□ 1.4
PCOLCE-202ENST00000460002 P3H3Q8IVL6 736 aa23.76■■□□□ 1.39
PCOLCE-202ENST00000460002 HECW1Q76N89 1606 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms