RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 IFT140Q96RY7 1462 aa25.19■■□□□ 1.62
CAPN13-203ENST00000458085 P3H3Q8IVL6 736 aa25.14■■□□□ 1.61
CAPN13-203ENST00000458085 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
CAPN13-203ENST00000458085 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
CAPN13-203ENST00000458085 ADAMTS12P58397 1594 aa25.08■■□□□ 1.61
CAPN13-203ENST00000458085 FHAD1B1AJZ9 1412 aa25.08■■□□□ 1.61
CAPN13-203ENST00000458085 FHOD3Q2V2M9 1422 aa25.07■■□□□ 1.6
CAPN13-203ENST00000458085 EFCAB5A4FU69 1503 aa25.04■■□□□ 1.6
CAPN13-203ENST00000458085 EIF4G3O43432 1585 aaKnown RBP25.03■■□□□ 1.6
CAPN13-203ENST00000458085 PCF11O94913 1555 aaKnown RBP24.98■■□□□ 1.59
CAPN13-203ENST00000458085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.98■■□□□ 1.59
CAPN13-203ENST00000458085 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
CAPN13-203ENST00000458085 SAMD9Q5K651 1589 aa24.96■■□□□ 1.59
CAPN13-203ENST00000458085 TIAM1Q13009 1591 aa24.95■■□□□ 1.58
CAPN13-203ENST00000458085 HNRNPUL2Q1KMD3 747 aaKnown RBP24.91■■□□□ 1.58
CAPN13-203ENST00000458085 MAP3K1Q13233 1512 aa24.9■■□□□ 1.58
CAPN13-203ENST00000458085 ZEB1P37275 1124 aaPredicted RBP24.89■■□□□ 1.58
CAPN13-203ENST00000458085 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
CAPN13-203ENST00000458085 IQGAP2Q13576 1575 aa24.87■■□□□ 1.57
CAPN13-203ENST00000458085 CASKIN1Q8WXD9 1431 aa24.87■■□□□ 1.57
CAPN13-203ENST00000458085 FYCO1Q9BQS8 1478 aa24.86■■□□□ 1.57
CAPN13-203ENST00000458085 FMN1Q68DA7 1419 aa24.85■■□□□ 1.57
CAPN13-203ENST00000458085 CFAP43Q8NDM7 1665 aa24.85■■□□□ 1.57
CAPN13-203ENST00000458085 LRRC9Q6ZRR7 1453 aa24.84■■□□□ 1.57
CAPN13-203ENST00000458085 CCER1Q8TC90 406 aaPredicted RBP24.84■■□□□ 1.57
CAPN13-203ENST00000458085 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
CAPN13-203ENST00000458085 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
CAPN13-203ENST00000458085 RRBP1Q9P2E9 1410 aaKnown RBP24.8■■□□□ 1.56
CAPN13-203ENST00000458085 SYNJ2O15056 1496 aa24.76■■□□□ 1.55
CAPN13-203ENST00000458085 KIAA0586Q9BVV6 1533 aa24.75■■□□□ 1.55
CAPN13-203ENST00000458085 LRRIQ1Q96JM4 1722 aa24.74■■□□□ 1.55
CAPN13-203ENST00000458085 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
CAPN13-203ENST00000458085 UGGT2Q9NYU1 1516 aa24.74■■□□□ 1.55
CAPN13-203ENST00000458085 PHLDB1Q86UU1 1377 aa24.71■■□□□ 1.55
CAPN13-203ENST00000458085 CCNB3Q8WWL7 1395 aa24.71■■□□□ 1.55
CAPN13-203ENST00000458085 FBLN2P98095 1184 aa24.71■■□□□ 1.55
CAPN13-203ENST00000458085 CEP170Q5SW79 1584 aa24.7■■□□□ 1.55
CAPN13-203ENST00000458085 DISP1Q96F81 1524 aa24.66■■□□□ 1.54
CAPN13-203ENST00000458085 KIAA0556O60303 1618 aa24.63■■□□□ 1.53
CAPN13-203ENST00000458085 NUP160Q12769 1436 aa24.61■■□□□ 1.53
CAPN13-203ENST00000458085 MTUS2Q5JR59 1369 aa24.58■■□□□ 1.52
CAPN13-203ENST00000458085 ITGAEP38570 1179 aa24.58■■□□□ 1.52
CAPN13-203ENST00000458085 HECW1Q76N89 1606 aa24.56■■□□□ 1.52
CAPN13-203ENST00000458085 MAGI3Q5TCQ9 1506 aa24.54■■□□□ 1.52
CAPN13-203ENST00000458085 EPRSP07814 1512 aaKnown RBP24.52■■□□□ 1.52
CAPN13-203ENST00000458085 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
CAPN13-203ENST00000458085 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
CAPN13-203ENST00000458085 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
CAPN13-203ENST00000458085 FAM50AQ14320 339 aaKnown RBP24.5■■□□□ 1.51
CAPN13-203ENST00000458085 JPH4Q96JJ6 628 aa24.5■■□□□ 1.51
CAPN13-203ENST00000458085 EHBP1L1Q8N3D4 1523 aa24.48■■□□□ 1.51
CAPN13-203ENST00000458085 NCOA2Q15596 1464 aa24.47■■□□□ 1.51
CAPN13-203ENST00000458085 CHD1O14646 1710 aa24.44■■□□□ 1.5
CAPN13-203ENST00000458085 FGD6Q6ZV73 1430 aa24.44■■□□□ 1.5
CAPN13-203ENST00000458085 SUPT6HQ7KZ85 1726 aaKnown RBP24.44■■□□□ 1.5
CAPN13-203ENST00000458085 NUP153P49790 1475 aaKnown RBP24.43■■□□□ 1.5
CAPN13-203ENST00000458085 RAPGEF6Q8TEU7 1601 aa24.42■■□□□ 1.5
CAPN13-203ENST00000458085 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
CAPN13-203ENST00000458085 CARMIL2Q6F5E8 1435 aa24.4■■□□□ 1.5
CAPN13-203ENST00000458085 DHX57Q6P158 1386 aaKnown RBP24.39■■□□□ 1.5
CAPN13-203ENST00000458085 PLB1Q6P1J6 1458 aa24.38■■□□□ 1.49
CAPN13-203ENST00000458085 MYOM3Q5VTT5 1437 aa24.38■■□□□ 1.49
CAPN13-203ENST00000458085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.37■■□□□ 1.49
CAPN13-203ENST00000458085 RAB3GAP2Q9H2M9 1393 aa24.34■■□□□ 1.49
CAPN13-203ENST00000458085 PRG4Q92954 1404 aaPredicted RBP24.3■■□□□ 1.48
CAPN13-203ENST00000458085 SETD5Q9C0A6 1442 aa24.3■■□□□ 1.48
CAPN13-203ENST00000458085 PTPRKQ15262 1439 aa24.28■■□□□ 1.48
CAPN13-203ENST00000458085 PTPN23Q9H3S7 1636 aa24.27■■□□□ 1.48
CAPN13-203ENST00000458085 ABCA8O94911 1581 aa24.24■■□□□ 1.47
CAPN13-203ENST00000458085 CLSPNQ9HAW4 1339 aa24.21■■□□□ 1.47
CAPN13-203ENST00000458085 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
CAPN13-203ENST00000458085 TCOF1Q13428 1488 aaKnown RBP24.2■■□□□ 1.46
CAPN13-203ENST00000458085 CDK11AQ9UQ88 783 aaPredicted RBP24.19■■□□□ 1.46
CAPN13-203ENST00000458085 PTPRGP23470 1445 aa24.17■■□□□ 1.46
CAPN13-203ENST00000458085 TROQ12816 1431 aaPredicted RBP24.17■■□□□ 1.46
CAPN13-203ENST00000458085 ERCC6L2Q5T890 1561 aa24.16■■□□□ 1.46
CAPN13-203ENST00000458085 MIA2Q96PC5 1412 aa24.15■■□□□ 1.46
CAPN13-203ENST00000458085 ATP10BO94823 1461 aa24.14■■□□□ 1.45
CAPN13-203ENST00000458085 MAPKBP1O60336 1514 aa24.13■■□□□ 1.45
CAPN13-203ENST00000458085 KIF14Q15058 1648 aa24.12■■□□□ 1.45
CAPN13-203ENST00000458085 HFM1A2PYH4 1435 aa24.11■■□□□ 1.45
CAPN13-203ENST00000458085 CLASP1Q7Z460 1538 aa24.11■■□□□ 1.45
CAPN13-203ENST00000458085 ADCY10Q96PN6 1610 aa24.08■■□□□ 1.45
CAPN13-203ENST00000458085 NAIPQ13075 1403 aa24.08■■□□□ 1.45
CAPN13-203ENST00000458085 ZNF644Q9H582 1327 aaPredicted RBP24.07■■□□□ 1.44
CAPN13-203ENST00000458085 CHIC2Q9UKJ5 165 aa24.07■■□□□ 1.44
CAPN13-203ENST00000458085 PLEKHD1A6NEE1 506 aa24.04■■□□□ 1.44
CAPN13-203ENST00000458085 UACAQ9BZF9 1416 aa24.03■■□□□ 1.44
CAPN13-203ENST00000458085 GPATCH8Q9UKJ3 1502 aaKnown RBP24.03■■□□□ 1.44
CAPN13-203ENST00000458085 RRP7BPQ9NSQ0 103 aa24.03■■□□□ 1.44
CAPN13-203ENST00000458085 ITSN2Q9NZM3 1697 aa23.98■■□□□ 1.43
CAPN13-203ENST00000458085 DAPK1P53355 1430 aa23.98■■□□□ 1.43
CAPN13-203ENST00000458085 CFDP1Q9UEE9 299 aaPredicted RBP23.98■■□□□ 1.43
CAPN13-203ENST00000458085 ABCC10Q5T3U5 1492 aa23.97■■□□□ 1.43
CAPN13-203ENST00000458085 ABCC5O15440 1437 aa23.97■■□□□ 1.43
CAPN13-203ENST00000458085 DNMT1P26358 1616 aaKnown RBP23.97■■□□□ 1.43
CAPN13-203ENST00000458085 ZNF316A6NFI3 1004 aaPredicted RBP23.96■■□□□ 1.43
CAPN13-203ENST00000458085 GCC2Q8IWJ2 1684 aa23.96■■□□□ 1.43
CAPN13-203ENST00000458085 CAMSAP2Q08AD1 1489 aa23.96■■□□□ 1.43
CAPN13-203ENST00000458085 KDM6BO15054 1643 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms