RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 PBRM1Q86U86 1689 aa25.15■■□□□ 1.62
MBD1-210ENST00000457839 KANK4Q5T7N3 995 aaPredicted RBP25.12■■□□□ 1.61
MBD1-210ENST00000457839 GRIN2BQ13224 1484 aa25.11■■□□□ 1.61
MBD1-210ENST00000457839 CTTNBP2Q8WZ74 1663 aa25.09■■□□□ 1.61
MBD1-210ENST00000457839 FHAD1B1AJZ9 1412 aa25.08■■□□□ 1.61
MBD1-210ENST00000457839 FHOD3Q2V2M9 1422 aa25.08■■□□□ 1.61
MBD1-210ENST00000457839 EIF4G3O43432 1585 aaKnown RBP25.04■■□□□ 1.6
MBD1-210ENST00000457839 ADAMTS12P58397 1594 aa25.04■■□□□ 1.6
MBD1-210ENST00000457839 ATP1B4Q9UN42 357 aaPredicted RBP25.03■■□□□ 1.6
MBD1-210ENST00000457839 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
MBD1-210ENST00000457839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.95■■□□□ 1.59
MBD1-210ENST00000457839 EFCAB5A4FU69 1503 aa24.95■■□□□ 1.58
MBD1-210ENST00000457839 FBLN2P98095 1184 aa24.93■■□□□ 1.58
MBD1-210ENST00000457839 HNRNPUL2Q1KMD3 747 aaKnown RBP24.93■■□□□ 1.58
MBD1-210ENST00000457839 PCF11O94913 1555 aaKnown RBP24.91■■□□□ 1.58
MBD1-210ENST00000457839 CHMP7Q8WUX9 453 aaPredicted RBP24.88■■□□□ 1.57
MBD1-210ENST00000457839 SAMD9Q5K651 1589 aa24.86■■□□□ 1.57
MBD1-210ENST00000457839 TIAM1Q13009 1591 aa24.85■■□□□ 1.57
MBD1-210ENST00000457839 IQGAP2Q13576 1575 aa24.85■■□□□ 1.57
MBD1-210ENST00000457839 GRIN2AQ12879 1464 aa24.84■■□□□ 1.57
MBD1-210ENST00000457839 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
MBD1-210ENST00000457839 FMN1Q68DA7 1419 aa24.82■■□□□ 1.56
MBD1-210ENST00000457839 CASKIN1Q8WXD9 1431 aa24.81■■□□□ 1.56
MBD1-210ENST00000457839 CCER1Q8TC90 406 aaPredicted RBP24.8■■□□□ 1.56
MBD1-210ENST00000457839 FYCO1Q9BQS8 1478 aa24.79■■□□□ 1.56
MBD1-210ENST00000457839 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
MBD1-210ENST00000457839 LRRC9Q6ZRR7 1453 aa24.77■■□□□ 1.56
MBD1-210ENST00000457839 MAP3K1Q13233 1512 aa24.75■■□□□ 1.55
MBD1-210ENST00000457839 KIAA0586Q9BVV6 1533 aa24.75■■□□□ 1.55
MBD1-210ENST00000457839 ZEB1P37275 1124 aaPredicted RBP24.71■■□□□ 1.55
MBD1-210ENST00000457839 CEP170Q5SW79 1584 aa24.7■■□□□ 1.55
MBD1-210ENST00000457839 CFAP43Q8NDM7 1665 aa24.7■■□□□ 1.54
MBD1-210ENST00000457839 ARID3CA6NKF2 412 aa24.68■■□□□ 1.54
MBD1-210ENST00000457839 UGGT2Q9NYU1 1516 aa24.68■■□□□ 1.54
MBD1-210ENST00000457839 RRBP1Q9P2E9 1410 aaKnown RBP24.67■■□□□ 1.54
MBD1-210ENST00000457839 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
MBD1-210ENST00000457839 ITGAEP38570 1179 aa24.67■■□□□ 1.54
MBD1-210ENST00000457839 CCNB3Q8WWL7 1395 aa24.65■■□□□ 1.54
MBD1-210ENST00000457839 DISP1Q96F81 1524 aa24.64■■□□□ 1.54
MBD1-210ENST00000457839 LRRIQ1Q96JM4 1722 aa24.64■■□□□ 1.53
MBD1-210ENST00000457839 NUP160Q12769 1436 aa24.6■■□□□ 1.53
MBD1-210ENST00000457839 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
MBD1-210ENST00000457839 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
MBD1-210ENST00000457839 KIAA0556O60303 1618 aa24.59■■□□□ 1.53
MBD1-210ENST00000457839 FAM50AQ14320 339 aaKnown RBP24.55■■□□□ 1.52
MBD1-210ENST00000457839 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
MBD1-210ENST00000457839 HECW1Q76N89 1606 aa24.49■■□□□ 1.51
MBD1-210ENST00000457839 EPRSP07814 1512 aaKnown RBP24.49■■□□□ 1.51
MBD1-210ENST00000457839 MAGI3Q5TCQ9 1506 aa24.49■■□□□ 1.51
MBD1-210ENST00000457839 CHD1O14646 1710 aa24.46■■□□□ 1.51
MBD1-210ENST00000457839 CCDC18Q5T9S5 1454 aa24.45■■□□□ 1.5
MBD1-210ENST00000457839 CARMIL2Q6F5E8 1435 aa24.43■■□□□ 1.5
MBD1-210ENST00000457839 NCOA2Q15596 1464 aa24.43■■□□□ 1.5
MBD1-210ENST00000457839 PLB1Q6P1J6 1458 aa24.42■■□□□ 1.5
MBD1-210ENST00000457839 NUP153P49790 1475 aaKnown RBP24.41■■□□□ 1.5
MBD1-210ENST00000457839 EHBP1L1Q8N3D4 1523 aa24.39■■□□□ 1.5
MBD1-210ENST00000457839 FGD6Q6ZV73 1430 aa24.38■■□□□ 1.49
MBD1-210ENST00000457839 RAPGEF6Q8TEU7 1601 aa24.38■■□□□ 1.49
MBD1-210ENST00000457839 PRG4Q92954 1404 aaPredicted RBP24.37■■□□□ 1.49
MBD1-210ENST00000457839 SUPT6HQ7KZ85 1726 aaKnown RBP24.35■■□□□ 1.49
MBD1-210ENST00000457839 MYOM3Q5VTT5 1437 aa24.33■■□□□ 1.48
MBD1-210ENST00000457839 DHX57Q6P158 1386 aaKnown RBP24.29■■□□□ 1.48
MBD1-210ENST00000457839 RAB3GAP2Q9H2M9 1393 aa24.29■■□□□ 1.48
MBD1-210ENST00000457839 ARHGEF11O15085 1522 aa24.28■■□□□ 1.48
MBD1-210ENST00000457839 PTPRGP23470 1445 aa24.24■■□□□ 1.47
MBD1-210ENST00000457839 CDK11AQ9UQ88 783 aaPredicted RBP24.24■■□□□ 1.47
MBD1-210ENST00000457839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.24■■□□□ 1.47
MBD1-210ENST00000457839 PTPRKQ15262 1439 aa24.23■■□□□ 1.47
MBD1-210ENST00000457839 SETD5Q9C0A6 1442 aa24.22■■□□□ 1.47
MBD1-210ENST00000457839 ERCC6L2Q5T890 1561 aa24.22■■□□□ 1.47
MBD1-210ENST00000457839 ABCA8O94911 1581 aa24.19■■□□□ 1.46
MBD1-210ENST00000457839 PTPN23Q9H3S7 1636 aa24.19■■□□□ 1.46
MBD1-210ENST00000457839 SHROOM2Q13796 1616 aa24.16■■□□□ 1.46
MBD1-210ENST00000457839 ATP10BO94823 1461 aa24.15■■□□□ 1.46
MBD1-210ENST00000457839 CHIC2Q9UKJ5 165 aa24.15■■□□□ 1.46
MBD1-210ENST00000457839 TROQ12816 1431 aaPredicted RBP24.15■■□□□ 1.46
MBD1-210ENST00000457839 ZNF644Q9H582 1327 aaPredicted RBP24.14■■□□□ 1.45
MBD1-210ENST00000457839 PLEKHD1A6NEE1 506 aa24.11■■□□□ 1.45
MBD1-210ENST00000457839 CLASP1Q7Z460 1538 aa24.11■■□□□ 1.45
MBD1-210ENST00000457839 KIF14Q15058 1648 aa24.09■■□□□ 1.45
MBD1-210ENST00000457839 TCOF1Q13428 1488 aaKnown RBP24.09■■□□□ 1.45
MBD1-210ENST00000457839 MIA2Q96PC5 1412 aa24.08■■□□□ 1.45
MBD1-210ENST00000457839 RRP7BPQ9NSQ0 103 aa24.08■■□□□ 1.45
MBD1-210ENST00000457839 UACAQ9BZF9 1416 aa24.06■■□□□ 1.44
MBD1-210ENST00000457839 CLSPNQ9HAW4 1339 aa24.05■■□□□ 1.44
MBD1-210ENST00000457839 ZNF777Q9ULD5 760 aaPredicted RBP24.05■■□□□ 1.44
MBD1-210ENST00000457839 CFDP1Q9UEE9 299 aaPredicted RBP24.04■■□□□ 1.44
MBD1-210ENST00000457839 HFM1A2PYH4 1435 aa24.02■■□□□ 1.44
MBD1-210ENST00000457839 NAIPQ13075 1403 aa24.01■■□□□ 1.43
MBD1-210ENST00000457839 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
MBD1-210ENST00000457839 MAPKBP1O60336 1514 aa24■■□□□ 1.43
MBD1-210ENST00000457839 ADCY10Q96PN6 1610 aa23.96■■□□□ 1.43
MBD1-210ENST00000457839 DAPK1P53355 1430 aa23.94■■□□□ 1.42
MBD1-210ENST00000457839 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
MBD1-210ENST00000457839 ABCC5O15440 1437 aa23.93■■□□□ 1.42
MBD1-210ENST00000457839 ABCC2Q92887 1545 aa23.93■■□□□ 1.42
MBD1-210ENST00000457839 CAMSAP2Q08AD1 1489 aa23.92■■□□□ 1.42
MBD1-210ENST00000457839 ABCC10Q5T3U5 1492 aa23.92■■□□□ 1.42
MBD1-210ENST00000457839 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
MBD1-210ENST00000457839 KCNH8Q96L42 1107 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms