RNA–Protein interactions for RNA: ENST00000456986.5

NEDD4L-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 8,436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-209ENST00000456986 FBLN2P98095 1184 aa11.24□□□□□ -0.61
NEDD4L-209ENST00000456986 TSPY4P0CV99 314 aa11.24□□□□□ -0.61
NEDD4L-209ENST00000456986 TSPY10P0CW01 314 aa11.24□□□□□ -0.61
NEDD4L-209ENST00000456986 WIZO95785 1651 aa11.23□□□□□ -0.61
NEDD4L-209ENST00000456986 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
NEDD4L-209ENST00000456986 MRS2Q9HD23 443 aa11.22□□□□□ -0.61
NEDD4L-209ENST00000456986 SCAF1Q9H7N4 1312 aaKnown RBP11.21□□□□□ -0.61
NEDD4L-209ENST00000456986 ZNF777Q9ULD5 760 aaPredicted RBP11.2□□□□□ -0.62
NEDD4L-209ENST00000456986 VPS8Q8N3P4 1428 aa11.2□□□□□ -0.62
NEDD4L-209ENST00000456986 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
NEDD4L-209ENST00000456986 MYH16Q9H6N6 1097 aa11.19□□□□□ -0.62
NEDD4L-209ENST00000456986 FAM9BQ8IZU0 186 aa11.19□□□□□ -0.62
NEDD4L-209ENST00000456986 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
NEDD4L-209ENST00000456986 SMARCA4P51532 1647 aa11.19□□□□□ -0.62
NEDD4L-209ENST00000456986 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
NEDD4L-209ENST00000456986 MIER1Q8N108 512 aa11.17□□□□□ -0.62
NEDD4L-209ENST00000456986 ARHGAP35Q9NRY4 1499 aa11.17□□□□□ -0.62
NEDD4L-209ENST00000456986 ESF1Q9H501 851 aaKnown RBP11.17□□□□□ -0.62
NEDD4L-209ENST00000456986 CHMP4BQ9H444 224 aaKnown RBP11.16□□□□□ -0.62
NEDD4L-209ENST00000456986 ARID4BQ4LE39 1312 aaPredicted RBP11.15□□□□□ -0.63
NEDD4L-209ENST00000456986 GOLGA6L22H0YM25 854 aa11.14□□□□□ -0.63
NEDD4L-209ENST00000456986 PPM1GO15355 546 aaPredicted RBP11.14□□□□□ -0.63
NEDD4L-209ENST00000456986 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD4L-209ENST00000456986 CCER2I3L3R5 266 aa11.13□□□□□ -0.63
NEDD4L-209ENST00000456986 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
NEDD4L-209ENST00000456986 MS4A1P11836 297 aa11.11□□□□□ -0.63
NEDD4L-209ENST00000456986 FMN1Q68DA7 1419 aa11.11□□□□□ -0.63
NEDD4L-209ENST00000456986 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
NEDD4L-209ENST00000456986 SETD5Q9C0A6 1442 aa11.1□□□□□ -0.63
NEDD4L-209ENST00000456986 PPP4R2Q9NY27 417 aa11.09□□□□□ -0.63
NEDD4L-209ENST00000456986 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
NEDD4L-209ENST00000456986 MROH2BQ7Z745 1585 aa11.09□□□□□ -0.63
NEDD4L-209ENST00000456986 CASC1Q6TDU7 716 aa11.09□□□□□ -0.63
NEDD4L-209ENST00000456986 CFAP53Q96M91 514 aa11.08□□□□□ -0.64
NEDD4L-209ENST00000456986 CCDC88BA6NC98 1476 aa11.08□□□□□ -0.64
NEDD4L-209ENST00000456986 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
NEDD4L-209ENST00000456986 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
NEDD4L-209ENST00000456986 CALRP27797 417 aaKnown RBP11.07□□□□□ -0.64
NEDD4L-209ENST00000456986 CHMP7Q8WUX9 453 aaPredicted RBP11.07□□□□□ -0.64
NEDD4L-209ENST00000456986 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
NEDD4L-209ENST00000456986 KNSTRNQ9Y448 316 aa11.05□□□□□ -0.64
NEDD4L-209ENST00000456986 ZRSR1Q15695 479 aaKnown RBP11.05□□□□□ -0.64
NEDD4L-209ENST00000456986 KIF21BO75037 1637 aa11.04□□□□□ -0.64
NEDD4L-209ENST00000456986 NBR1Q14596 966 aa11.04□□□□□ -0.64
NEDD4L-209ENST00000456986 CHIC2Q9UKJ5 165 aa11.03□□□□□ -0.64
NEDD4L-209ENST00000456986 PTMSP20962 102 aa11.03□□□□□ -0.64
NEDD4L-209ENST00000456986 CUX2O14529 1486 aa11.02□□□□□ -0.65
NEDD4L-209ENST00000456986 DNTTIP2Q5QJE6 756 aaKnown RBP11.01□□□□□ -0.65
NEDD4L-209ENST00000456986 CARMIL1Q5VZK9 1371 aa11.01□□□□□ -0.65
NEDD4L-209ENST00000456986 CFDP1Q9UEE9 299 aaPredicted RBP11□□□□□ -0.65
NEDD4L-209ENST00000456986 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
NEDD4L-209ENST00000456986 CUX1P39880 1505 aa11□□□□□ -0.65
NEDD4L-209ENST00000456986 KANK1Q14678 1352 aa11□□□□□ -0.65
NEDD4L-209ENST00000456986 ROCK2O75116 1388 aaKnown RBP11□□□□□ -0.65
NEDD4L-209ENST00000456986 ARID3CA6NKF2 412 aa11□□□□□ -0.65
NEDD4L-209ENST00000456986 PHLDB1Q86UU1 1377 aa10.99□□□□□ -0.65
NEDD4L-209ENST00000456986 NOP58Q9Y2X3 529 aaKnown RBP10.99□□□□□ -0.65
NEDD4L-209ENST00000456986 L1TD1Q5T7N2 865 aaKnown RBP10.99□□□□□ -0.65
NEDD4L-209ENST00000456986 CCDC18Q5T9S5 1454 aa10.98□□□□□ -0.65
NEDD4L-209ENST00000456986 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
NEDD4L-209ENST00000456986 EIF4G1Q04637 1599 aaKnown RBP10.98□□□□□ -0.65
NEDD4L-209ENST00000456986 FTSJ3Q8IY81 847 aaKnown RBP10.98□□□□□ -0.65
NEDD4L-209ENST00000456986 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
NEDD4L-209ENST00000456986 ARXQ96QS3 562 aa10.97□□□□□ -0.65
NEDD4L-209ENST00000456986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.658e-7■■■□□ 14.8
NEDD4L-209ENST00000456986 RRP7BPQ9NSQ0 103 aa10.97□□□□□ -0.65
NEDD4L-209ENST00000456986 PTMAP06454 111 aaKnown RBP10.97□□□□□ -0.65
NEDD4L-209ENST00000456986 CARD11Q9BXL7 1154 aa10.97□□□□□ -0.65
NEDD4L-209ENST00000456986 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
NEDD4L-209ENST00000456986 GOLGA6L6A8MZA4 724 aa10.96□□□□□ -0.66
NEDD4L-209ENST00000456986 NUDCQ9Y266 331 aa10.95□□□□□ -0.66
NEDD4L-209ENST00000456986 SUPT16HQ9Y5B9 1047 aaKnown RBP10.95□□□□□ -0.66
NEDD4L-209ENST00000456986 ERCC6Q03468 1493 aa10.95□□□□□ -0.66
NEDD4L-209ENST00000456986 CARMIL2Q6F5E8 1435 aa10.95□□□□□ -0.66
NEDD4L-209ENST00000456986 NRDCO43847 1150 aa10.94□□□□□ -0.66
NEDD4L-209ENST00000456986 SOGA1O94964 1423 aa10.94□□□□□ -0.66
NEDD4L-209ENST00000456986 PDS5BQ9NTI5 1447 aa10.94□□□□□ -0.66
NEDD4L-209ENST00000456986 EIF3AQ14152 1382 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-209ENST00000456986 ERICH3Q5RHP9 1530 aa10.93□□□□□ -0.66
NEDD4L-209ENST00000456986 RAPGEF2Q9Y4G8 1499 aa10.93□□□□□ -0.66
NEDD4L-209ENST00000456986 PRDM2Q13029 1718 aa10.93□□□□□ -0.66
NEDD4L-209ENST00000456986 TMF1P82094 1093 aa10.93□□□□□ -0.66
NEDD4L-209ENST00000456986 RALBP1Q15311 655 aa10.92□□□□□ -0.66
NEDD4L-209ENST00000456986 KTN1Q86UP2 1357 aaKnown RBP10.92□□□□□ -0.66
NEDD4L-209ENST00000456986 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
NEDD4L-209ENST00000456986 MAPK8IP3Q9UPT6 1336 aa10.9□□□□□ -0.66
NEDD4L-209ENST00000456986 NCBP3Q53F19 620 aaKnown RBP10.9□□□□□ -0.66
NEDD4L-209ENST00000456986 TULP1O00294 542 aaPredicted RBP10.9□□□□□ -0.66
NEDD4L-209ENST00000456986 AMER1Q5JTC6 1135 aaPredicted RBP10.89□□□□□ -0.67
NEDD4L-209ENST00000456986 RAB3GAP2Q9H2M9 1393 aa10.89□□□□□ -0.67
NEDD4L-209ENST00000456986 TNNT3P45378 269 aaPredicted RBP10.89□□□□□ -0.67
NEDD4L-209ENST00000456986 CALD1Q05682 793 aaKnown RBP10.88□□□□□ -0.67
NEDD4L-209ENST00000456986 CHMP4AQ9BY43 222 aa10.88□□□□□ -0.67
NEDD4L-209ENST00000456986 SUPT6HQ7KZ85 1726 aaKnown RBP10.87□□□□□ -0.67
NEDD4L-209ENST00000456986 RSPH4AQ5TD94 716 aa10.87□□□□□ -0.67
NEDD4L-209ENST00000456986 CHAF1AQ13111 956 aaPredicted RBP10.87□□□□□ -0.67
NEDD4L-209ENST00000456986 ANKRD30AQ9BXX3 1397 aa10.86□□□□□ -0.67
NEDD4L-209ENST00000456986 TCERG1O14776 1098 aaKnown RBP10.86□□□□□ -0.67
NEDD4L-209ENST00000456986 PRM3Q9NNZ6 103 aa10.86□□□□□ -0.67
NEDD4L-209ENST00000456986 PDE3BQ13370 1112 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms