RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 FAM69CQ0P6D2 419 aa23.27■■□□□ 1.32
PSMC4-202ENST00000455878 IGF1RP08069 1367 aa23.25■■□□□ 1.31
PSMC4-202ENST00000455878 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
PSMC4-202ENST00000455878 KIAA0586Q9BVV6 1533 aa23.19■■□□□ 1.3
PSMC4-202ENST00000455878 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
PSMC4-202ENST00000455878 TTBK1Q5TCY1 1321 aaPredicted RBP23.13■■□□□ 1.29
PSMC4-202ENST00000455878 KIF13AQ9H1H9 1805 aa23.13■■□□□ 1.29
PSMC4-202ENST00000455878 ABCC10Q5T3U5 1492 aa23.12■■□□□ 1.29
PSMC4-202ENST00000455878 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
PSMC4-202ENST00000455878 CUL7Q14999 1698 aa23.09■■□□□ 1.29
PSMC4-202ENST00000455878 PTPRGP23470 1445 aa23.08■■□□□ 1.29
PSMC4-202ENST00000455878 MAPKBP1O60336 1514 aa23.07■■□□□ 1.28
PSMC4-202ENST00000455878 CARMIL2Q6F5E8 1435 aa23.04■■□□□ 1.28
PSMC4-202ENST00000455878 ADCY10Q96PN6 1610 aa23.04■■□□□ 1.28
PSMC4-202ENST00000455878 TNIKQ9UKE5 1360 aa22.99■■□□□ 1.27
PSMC4-202ENST00000455878 DIP2BQ9P265 1576 aa22.96■■□□□ 1.27
PSMC4-202ENST00000455878 TSPOAP1O95153 1857 aa22.88■■□□□ 1.25
PSMC4-202ENST00000455878 ABCC2Q92887 1545 aa22.88■■□□□ 1.25
PSMC4-202ENST00000455878 IQGAP2Q13576 1575 aa22.88■■□□□ 1.25
PSMC4-202ENST00000455878 KDM6BO15054 1643 aa22.87■■□□□ 1.25
PSMC4-202ENST00000455878 PLB1Q6P1J6 1458 aa22.86■■□□□ 1.25
PSMC4-202ENST00000455878 UACAQ9BZF9 1416 aa22.85■■□□□ 1.25
PSMC4-202ENST00000455878 ASXL2Q76L83 1435 aa22.84■■□□□ 1.25
PSMC4-202ENST00000455878 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
PSMC4-202ENST00000455878 UHRF1BP1LA0JNW5 1464 aa22.82■■□□□ 1.24
PSMC4-202ENST00000455878 KDM4FA0A1W2PPD8 638 aa22.82■■□□□ 1.24
PSMC4-202ENST00000455878 DISP1Q96F81 1524 aa22.78■■□□□ 1.24
PSMC4-202ENST00000455878 GLI2P10070 1586 aa22.73■■□□□ 1.23
PSMC4-202ENST00000455878 FAM9AQ8IZU1 332 aaPredicted RBP22.73■■□□□ 1.23
PSMC4-202ENST00000455878 UGGT2Q9NYU1 1516 aa22.73■■□□□ 1.23
PSMC4-202ENST00000455878 KDM5BQ9UGL1 1544 aa22.7■■□□□ 1.22
PSMC4-202ENST00000455878 EPRSP07814 1512 aaKnown RBP22.67■■□□□ 1.22
PSMC4-202ENST00000455878 KCNH8Q96L42 1107 aa22.65■■□□□ 1.22
PSMC4-202ENST00000455878 KIAA0556O60303 1618 aa22.64■■□□□ 1.22
PSMC4-202ENST00000455878 TEX14Q8IWB6 1497 aa22.64■■□□□ 1.22
PSMC4-202ENST00000455878 GOLGA3Q08378 1498 aa22.62■■□□□ 1.21
PSMC4-202ENST00000455878 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
PSMC4-202ENST00000455878 PPRC1Q5VV67 1664 aaKnown RBP22.6■■□□□ 1.21
PSMC4-202ENST00000455878 COL17A1Q9UMD9 1497 aaPredicted RBP22.57■■□□□ 1.2
PSMC4-202ENST00000455878 WDR7Q9Y4E6 1490 aa22.57■■□□□ 1.2
PSMC4-202ENST00000455878 MAP3K4Q9Y6R4 1608 aa22.56■■□□□ 1.2
PSMC4-202ENST00000455878 CD109Q6YHK3 1445 aa22.53■■□□□ 1.2
PSMC4-202ENST00000455878 P3H3Q8IVL6 736 aa22.53■■□□□ 1.2
PSMC4-202ENST00000455878 ADGRL1O94910 1474 aa22.52■■□□□ 1.2
PSMC4-202ENST00000455878 CTTNBP2Q8WZ74 1663 aa22.52■■□□□ 1.2
PSMC4-202ENST00000455878 PRXQ9BXM0 1461 aa22.51■■□□□ 1.19
PSMC4-202ENST00000455878 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
PSMC4-202ENST00000455878 CSRNP3Q8WYN3 585 aa22.48■■□□□ 1.19
PSMC4-202ENST00000455878 ABCA8O94911 1581 aa22.45■■□□□ 1.18
PSMC4-202ENST00000455878 MAGI3Q5TCQ9 1506 aa22.44■■□□□ 1.18
PSMC4-202ENST00000455878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
PSMC4-202ENST00000455878 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
PSMC4-202ENST00000455878 CFAP43Q8NDM7 1665 aa22.39■■□□□ 1.18
PSMC4-202ENST00000455878 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
PSMC4-202ENST00000455878 ATP10BO94823 1461 aa22.36■■□□□ 1.17
PSMC4-202ENST00000455878 PHLDB1Q86UU1 1377 aa22.32■■□□□ 1.16
PSMC4-202ENST00000455878 ILDR1Q86SU0 546 aaPredicted RBP22.31■■□□□ 1.16
PSMC4-202ENST00000455878 ARAP3Q8WWN8 1544 aa22.28■■□□□ 1.16
PSMC4-202ENST00000455878 PLEKHD1A6NEE1 506 aa22.27■■□□□ 1.16
PSMC4-202ENST00000455878 RAPGEF3O95398 923 aa22.26■■□□□ 1.15
PSMC4-202ENST00000455878 EEA1Q15075 1411 aa22.24■■□□□ 1.15
PSMC4-202ENST00000455878 HECW2Q9P2P5 1572 aa22.21■■□□□ 1.15
PSMC4-202ENST00000455878 ARID4BQ4LE39 1312 aaPredicted RBP22.2■■□□□ 1.15
PSMC4-202ENST00000455878 SAMD9Q5K651 1589 aa22.2■■□□□ 1.14
PSMC4-202ENST00000455878 RAPGEF6Q8TEU7 1601 aa22.2■■□□□ 1.14
PSMC4-202ENST00000455878 ABCA9Q8IUA7 1624 aa22.18■■□□□ 1.14
PSMC4-202ENST00000455878 NEO1Q92859 1461 aa22.18■■□□□ 1.14
PSMC4-202ENST00000455878 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
PSMC4-202ENST00000455878 FHOD3Q2V2M9 1422 aa22.15■■□□□ 1.14
PSMC4-202ENST00000455878 KIF21BO75037 1637 aa22.15■■□□□ 1.14
PSMC4-202ENST00000455878 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
PSMC4-202ENST00000455878 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
PSMC4-202ENST00000455878 ATP1B4Q9UN42 357 aaPredicted RBP22.09■■□□□ 1.13
PSMC4-202ENST00000455878 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
PSMC4-202ENST00000455878 DENND4BO75064 1496 aaPredicted RBP22.05■■□□□ 1.12
PSMC4-202ENST00000455878 PTPRMP28827 1452 aa22.05■■□□□ 1.12
PSMC4-202ENST00000455878 AKNAQ7Z591 1439 aa22.05■■□□□ 1.12
PSMC4-202ENST00000455878 EFCAB5A4FU69 1503 aa22.01■■□□□ 1.11
PSMC4-202ENST00000455878 FANCAO15360 1455 aa22.01■■□□□ 1.11
PSMC4-202ENST00000455878 CDK11AQ9UQ88 783 aaPredicted RBP22.01■■□□□ 1.11
PSMC4-202ENST00000455878 ADAMTSL3P82987 1691 aa22■■□□□ 1.11
PSMC4-202ENST00000455878 PLPPR3Q6T4P5 718 aa21.97■■□□□ 1.11
PSMC4-202ENST00000455878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
PSMC4-202ENST00000455878 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.11
PSMC4-202ENST00000455878 FRMPD1Q5SYB0 1578 aa21.94■■□□□ 1.1
PSMC4-202ENST00000455878 EFCAB2Q5VUJ9 269 aa21.94■■□□□ 1.1
PSMC4-202ENST00000455878 CFAP74Q9C0B2 1584 aa21.94■■□□□ 1.1
PSMC4-202ENST00000455878 BCORL1Q5H9F3 1711 aa21.93■■□□□ 1.1
PSMC4-202ENST00000455878 FBXO41Q8TF61 875 aa21.93■■□□□ 1.1
PSMC4-202ENST00000455878 MLECQ14165 292 aa21.92■■□□□ 1.1
PSMC4-202ENST00000455878 FMN1Q68DA7 1419 aa21.92■■□□□ 1.1
PSMC4-202ENST00000455878 PLCH2O75038 1416 aa21.91■■□□□ 1.1
PSMC4-202ENST00000455878 SCAPERQ9BY12 1400 aa21.9■■□□□ 1.1
PSMC4-202ENST00000455878 MADDQ8WXG6 1647 aa21.9■■□□□ 1.1
PSMC4-202ENST00000455878 CDK13Q14004 1512 aaKnown RBP21.89■■□□□ 1.09
PSMC4-202ENST00000455878 MAGI2Q86UL8 1455 aa21.88■■□□□ 1.09
PSMC4-202ENST00000455878 RICTORQ6R327 1708 aa21.88■■□□□ 1.09
PSMC4-202ENST00000455878 ARHGEF40Q8TER5 1519 aa21.87■■□□□ 1.09
PSMC4-202ENST00000455878 TTC37Q6PGP7 1564 aa21.87■■□□□ 1.09
PSMC4-202ENST00000455878 MYT1LQ9UL68 1186 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms