RNA–Protein interactions for RNA: ENST00000455531.1

MEG3-213, Transcript of maternally expressed 3, humanhuman

TSL 2 BASIC

Gene MEG3, Length 4,867 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-213ENST00000455531 FANCIQ9NVI1 1328 aa17.98■□□□□ 0.47
MEG3-213ENST00000455531 DDRGK1Q96HY6 314 aa17.97■□□□□ 0.47
MEG3-213ENST00000455531 CLIP1P30622 1438 aa17.97■□□□□ 0.47
MEG3-213ENST00000455531 TNIKQ9UKE5 1360 aa17.96■□□□□ 0.47
MEG3-213ENST00000455531 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.47
MEG3-213ENST00000455531 SALL2Q9Y467 1007 aaPredicted RBP17.95■□□□□ 0.46
MEG3-213ENST00000455531 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
MEG3-213ENST00000455531 STAG3Q9UJ98 1225 aa17.94■□□□□ 0.46
MEG3-213ENST00000455531 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
MEG3-213ENST00000455531 NAP1L5Q96NT1 182 aaPredicted RBP17.9■□□□□ 0.46
MEG3-213ENST00000455531 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
MEG3-213ENST00000455531 SIN3AQ96ST3 1273 aa17.87■□□□□ 0.45
MEG3-213ENST00000455531 ANP32BQ92688 251 aaKnown RBP17.86■□□□□ 0.45
MEG3-213ENST00000455531 IPO9Q96P70 1041 aaKnown RBP17.86■□□□□ 0.45
MEG3-213ENST00000455531 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
MEG3-213ENST00000455531 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.45
MEG3-213ENST00000455531 GOLGA3Q08378 1498 aa17.83■□□□□ 0.44
MEG3-213ENST00000455531 CANXP27824 592 aaKnown RBP17.83■□□□□ 0.44
MEG3-213ENST00000455531 P3H3Q8IVL6 736 aa17.81■□□□□ 0.44
MEG3-213ENST00000455531 UPF2Q9HAU5 1272 aaKnown RBP17.8■□□□□ 0.44
MEG3-213ENST00000455531 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
MEG3-213ENST00000455531 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
MEG3-213ENST00000455531 ARID3CA6NKF2 412 aa17.79■□□□□ 0.44
MEG3-213ENST00000455531 WIZO95785 1651 aa17.77■□□□□ 0.43
MEG3-213ENST00000455531 EEA1Q15075 1411 aa17.77■□□□□ 0.43
MEG3-213ENST00000455531 CHGAP10645 457 aaKnown RBP17.76■□□□□ 0.43
MEG3-213ENST00000455531 TRIM44Q96DX7 344 aaPredicted RBP17.74■□□□□ 0.43
MEG3-213ENST00000455531 MSH5O43196 834 aa17.7■□□□□ 0.42
MEG3-213ENST00000455531 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
MEG3-213ENST00000455531 BECN1Q14457 450 aa17.69■□□□□ 0.42
MEG3-213ENST00000455531 IL27Q8NEV9 243 aa17.69■□□□□ 0.42
MEG3-213ENST00000455531 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
MEG3-213ENST00000455531 RSPH6AQ9H0K4 717 aa17.67■□□□□ 0.42
MEG3-213ENST00000455531 VSIG10Q8N0Z9 540 aa17.66■□□□□ 0.42
MEG3-213ENST00000455531 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
MEG3-213ENST00000455531 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.42
MEG3-213ENST00000455531 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.64■□□□□ 0.41
MEG3-213ENST00000455531 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
MEG3-213ENST00000455531 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
MEG3-213ENST00000455531 SOGA1O94964 1423 aa17.62■□□□□ 0.41
MEG3-213ENST00000455531 ARID4BQ4LE39 1312 aaPredicted RBP17.61■□□□□ 0.41
MEG3-213ENST00000455531 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
MEG3-213ENST00000455531 PNNQ9H307 717 aaKnown RBP17.6■□□□□ 0.41
MEG3-213ENST00000455531 GSE1Q14687 1217 aa17.59■□□□□ 0.41
MEG3-213ENST00000455531 L1TD1Q5T7N2 865 aaKnown RBP17.59■□□□□ 0.41
MEG3-213ENST00000455531 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
MEG3-213ENST00000455531 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.41
MEG3-213ENST00000455531 CHIC2Q9UKJ5 165 aa17.58■□□□□ 0.41
MEG3-213ENST00000455531 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
MEG3-213ENST00000455531 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.4
MEG3-213ENST00000455531 RGS3P49796 1198 aa17.56■□□□□ 0.4
MEG3-213ENST00000455531 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
MEG3-213ENST00000455531 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
MEG3-213ENST00000455531 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
MEG3-213ENST00000455531 HSP90AA2PQ14568 343 aaPredicted RBP17.55■□□□□ 0.4
MEG3-213ENST00000455531 PKNOX2Q96KN3 472 aa17.54■□□□□ 0.4
MEG3-213ENST00000455531 TNNT2P45379 298 aaPredicted RBP17.54■□□□□ 0.4
MEG3-213ENST00000455531 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
MEG3-213ENST00000455531 TSPY4P0CV99 314 aa17.51■□□□□ 0.39
MEG3-213ENST00000455531 TSPY10P0CW01 314 aa17.51■□□□□ 0.39
MEG3-213ENST00000455531 KANK4Q5T7N3 995 aaPredicted RBP17.5■□□□□ 0.39
MEG3-213ENST00000455531 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
MEG3-213ENST00000455531 RAB3GAP2Q9H2M9 1393 aa17.48■□□□□ 0.39
MEG3-213ENST00000455531 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
MEG3-213ENST00000455531 A0A0G2JS52 829 aa17.48■□□□□ 0.39
MEG3-213ENST00000455531 HSPA5P11021 654 aaKnown RBP17.47■□□□□ 0.39
MEG3-213ENST00000455531 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
MEG3-213ENST00000455531 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
MEG3-213ENST00000455531 PDE4AP27815 886 aa17.45■□□□□ 0.38
MEG3-213ENST00000455531 RRP7BPQ9NSQ0 103 aa17.45■□□□□ 0.38
MEG3-213ENST00000455531 NUDCQ9Y266 331 aa17.45■□□□□ 0.38
MEG3-213ENST00000455531 C14orf37Q86TY3 774 aa17.44■□□□□ 0.38
MEG3-213ENST00000455531 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
MEG3-213ENST00000455531 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
MEG3-213ENST00000455531 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
MEG3-213ENST00000455531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.38
MEG3-213ENST00000455531 ATAD2BQ9ULI0 1458 aa17.42■□□□□ 0.38
MEG3-213ENST00000455531 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
MEG3-213ENST00000455531 UBE2Q2Q8WVN8 375 aa17.4■□□□□ 0.38
MEG3-213ENST00000455531 SLKQ9H2G2 1235 aaPredicted RBP17.4■□□□□ 0.38
MEG3-213ENST00000455531 HAP1P54257 671 aaPredicted RBP17.38■□□□□ 0.37
MEG3-213ENST00000455531 GOLGA6L22H0YM25 854 aa17.38■□□□□ 0.37
MEG3-213ENST00000455531 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
MEG3-213ENST00000455531 KDM2AQ9Y2K7 1162 aa17.37■□□□□ 0.37
MEG3-213ENST00000455531 GOLGA6L3A6NEY3 463 aa17.36■□□□□ 0.37
MEG3-213ENST00000455531 NCLP19338 710 aaKnown RBP17.36■□□□□ 0.37
MEG3-213ENST00000455531 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
MEG3-213ENST00000455531 SPRYD3Q8NCJ5 442 aa17.35■□□□□ 0.37
MEG3-213ENST00000455531 DNTTIP2Q5QJE6 756 aaKnown RBP17.35■□□□□ 0.37
MEG3-213ENST00000455531 ZBED9Q6R2W3 1325 aa17.34■□□□□ 0.37
MEG3-213ENST00000455531 ARID3AQ99856 593 aa17.33■□□□□ 0.37
MEG3-213ENST00000455531 NFKBIBQ15653 356 aa17.33■□□□□ 0.36
MEG3-213ENST00000455531 MSNP26038 577 aaKnown RBP17.32■□□□□ 0.36
MEG3-213ENST00000455531 FRAT1Q92837 279 aaPredicted RBP17.32■□□□□ 0.36
MEG3-213ENST00000455531 PTMAP06454 111 aaKnown RBP17.31■□□□□ 0.36
MEG3-213ENST00000455531 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
MEG3-213ENST00000455531 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.36
MEG3-213ENST00000455531 CDK11BP21127 795 aaKnown RBP17.27■□□□□ 0.35
MEG3-213ENST00000455531 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
MEG3-213ENST00000455531 PLEKHD1A6NEE1 506 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms