RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 AAMPQ13685 434 aa13.5□□□□□ -0.25
LINC01940-201ENST00000455228 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
LINC01940-201ENST00000455228 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
LINC01940-201ENST00000455228 ZMYND15Q9H091 742 aa13.45□□□□□ -0.26
LINC01940-201ENST00000455228 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
LINC01940-201ENST00000455228 RSPH6AQ9H0K4 717 aa13.45□□□□□ -0.26
LINC01940-201ENST00000455228 ATAD2BQ9ULI0 1458 aa13.43□□□□□ -0.26
LINC01940-201ENST00000455228 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
LINC01940-201ENST00000455228 GLIPR1L2Q4G1C9 344 aa13.42□□□□□ -0.26
LINC01940-201ENST00000455228 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
LINC01940-201ENST00000455228 BICRAQ9NZM4 1560 aa13.4□□□□□ -0.26
LINC01940-201ENST00000455228 CCNB3Q8WWL7 1395 aa13.39□□□□□ -0.27
LINC01940-201ENST00000455228 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
LINC01940-201ENST00000455228 BCANQ96GW7 911 aa13.38□□□□□ -0.27
LINC01940-201ENST00000455228 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
LINC01940-201ENST00000455228 RRBP1Q9P2E9 1410 aaKnown RBP13.37□□□□□ -0.27
LINC01940-201ENST00000455228 WASHC2CQ9Y4E1 1318 aa13.37□□□□□ -0.27
LINC01940-201ENST00000455228 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
LINC01940-201ENST00000455228 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
LINC01940-201ENST00000455228 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
LINC01940-201ENST00000455228 IL27Q8NEV9 243 aa13.36□□□□□ -0.27
LINC01940-201ENST00000455228 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
LINC01940-201ENST00000455228 WASHC2AQ641Q2 1341 aa13.34□□□□□ -0.27
LINC01940-201ENST00000455228 DDX10Q13206 875 aaKnown RBP13.33□□□□□ -0.28
LINC01940-201ENST00000455228 KIF27Q86VH2 1401 aa13.33□□□□□ -0.28
LINC01940-201ENST00000455228 FKBP8Q14318 412 aa13.33□□□□□ -0.28
LINC01940-201ENST00000455228 AEBP2Q6ZN18 517 aaPredicted RBP13.32□□□□□ -0.28
LINC01940-201ENST00000455228 RAB3GAP2Q9H2M9 1393 aa13.31□□□□□ -0.28
LINC01940-201ENST00000455228 RBM10P98175 930 aaKnown RBP13.3□□□□□ -0.28
LINC01940-201ENST00000455228 RSPH4AQ5TD94 716 aa13.3□□□□□ -0.28
LINC01940-201ENST00000455228 FAM50AQ14320 339 aaKnown RBP13.29□□□□□ -0.28
LINC01940-201ENST00000455228 CUX2O14529 1486 aa13.28□□□□□ -0.28
LINC01940-201ENST00000455228 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.28
LINC01940-201ENST00000455228 ATP1B4Q9UN42 357 aaPredicted RBP13.26□□□□□ -0.29
LINC01940-201ENST00000455228 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
LINC01940-201ENST00000455228 SIN3AQ96ST3 1273 aa13.26□□□□□ -0.29
LINC01940-201ENST00000455228 ARHGAP35Q9NRY4 1499 aa13.25□□□□□ -0.29
LINC01940-201ENST00000455228 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
LINC01940-201ENST00000455228 ANP32CO43423 234 aa13.23□□□□□ -0.29
LINC01940-201ENST00000455228 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
LINC01940-201ENST00000455228 HIRIP3Q9BW71 556 aaPredicted RBP13.22□□□□□ -0.29
LINC01940-201ENST00000455228 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
LINC01940-201ENST00000455228 TIMELESSQ9UNS1 1208 aa13.21□□□□□ -0.29
LINC01940-201ENST00000455228 CUX1P39880 1505 aa13.21□□□□□ -0.29
LINC01940-201ENST00000455228 MAPKBP1O60336 1514 aa13.2□□□□□ -0.3
LINC01940-201ENST00000455228 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
LINC01940-201ENST00000455228 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
LINC01940-201ENST00000455228 PPP1R15AO75807 674 aaPredicted RBP13.16□□□□□ -0.3
LINC01940-201ENST00000455228 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
LINC01940-201ENST00000455228 CCER2I3L3R5 266 aa13.15□□□□□ -0.3
LINC01940-201ENST00000455228 HOMEZQ8IX15 550 aa13.15□□□□□ -0.3
LINC01940-201ENST00000455228 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
LINC01940-201ENST00000455228 PHLDB1Q86UU1 1377 aa13.14□□□□□ -0.31
LINC01940-201ENST00000455228 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
LINC01940-201ENST00000455228 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
LINC01940-201ENST00000455228 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
LINC01940-201ENST00000455228 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
LINC01940-201ENST00000455228 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
LINC01940-201ENST00000455228 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
LINC01940-201ENST00000455228 IGF1RP08069 1367 aa13.12□□□□□ -0.31
LINC01940-201ENST00000455228 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
LINC01940-201ENST00000455228 FHAD1B1AJZ9 1412 aa13.11□□□□□ -0.31
LINC01940-201ENST00000455228 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
LINC01940-201ENST00000455228 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
LINC01940-201ENST00000455228 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
LINC01940-201ENST00000455228 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
LINC01940-201ENST00000455228 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
LINC01940-201ENST00000455228 CFTRP13569 1480 aa13.08□□□□□ -0.32
LINC01940-201ENST00000455228 BRD2P25440 801 aaKnown RBP13.08□□□□□ -0.32
LINC01940-201ENST00000455228 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
LINC01940-201ENST00000455228 HNRNPUQ00839 825 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC01940-201ENST00000455228 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
LINC01940-201ENST00000455228 CDK11AQ9UQ88 783 aaPredicted RBP13.04□□□□□ -0.32
LINC01940-201ENST00000455228 CALD1Q05682 793 aaKnown RBP13.03□□□□□ -0.32
LINC01940-201ENST00000455228 A0A0U1RQG5 324 aaPredicted RBP13.02□□□□□ -0.33
LINC01940-201ENST00000455228 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
LINC01940-201ENST00000455228 FHOD3Q2V2M9 1422 aa13□□□□□ -0.33
LINC01940-201ENST00000455228 PCF11O94913 1555 aaKnown RBP12.99□□□□□ -0.33
LINC01940-201ENST00000455228 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
LINC01940-201ENST00000455228 IPO4Q8TEX9 1081 aaKnown RBP12.98□□□□□ -0.33
LINC01940-201ENST00000455228 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
LINC01940-201ENST00000455228 CCDC18Q5T9S5 1454 aa12.96□□□□□ -0.34
LINC01940-201ENST00000455228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC01940-201ENST00000455228 CFAP43Q8NDM7 1665 aa12.95□□□□□ -0.34
LINC01940-201ENST00000455228 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
LINC01940-201ENST00000455228 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
LINC01940-201ENST00000455228 FYCO1Q9BQS8 1478 aa12.94□□□□□ -0.34
LINC01940-201ENST00000455228 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
LINC01940-201ENST00000455228 CASKIN1Q8WXD9 1431 aa12.93□□□□□ -0.34
LINC01940-201ENST00000455228 UACAQ9BZF9 1416 aa12.93□□□□□ -0.34
LINC01940-201ENST00000455228 NAP1L2Q9ULW6 460 aaPredicted RBP12.91□□□□□ -0.34
LINC01940-201ENST00000455228 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
LINC01940-201ENST00000455228 VGFO15240 615 aaPredicted RBP12.9□□□□□ -0.34
LINC01940-201ENST00000455228 HSPA5P11021 654 aaKnown RBP12.9□□□□□ -0.34
LINC01940-201ENST00000455228 HFM1A2PYH4 1435 aa12.9□□□□□ -0.35
LINC01940-201ENST00000455228 FMN1Q68DA7 1419 aa12.9□□□□□ -0.35
LINC01940-201ENST00000455228 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
LINC01940-201ENST00000455228 SAMD1Q6SPF0 538 aaPredicted RBP12.89□□□□□ -0.35
LINC01940-201ENST00000455228 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
LINC01940-201ENST00000455228 EIF4G2P78344 907 aaKnown RBP eCLIP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms