RNA–Protein interactions for RNA: ENST00000455163.1

LINC02249-201, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

Gene LINC02249, Length 399 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-201ENST00000455163 MNX1P50219 401 aaPredicted RBP8.61□□□□□ -1.03
LINC02249-201ENST00000455163 MS4A3Q96HJ5 214 aa8.6□□□□□ -1.03
LINC02249-201ENST00000455163 C7P10643 843 aa8.59□□□□□ -1.03
LINC02249-201ENST00000455163 FAM163AQ96GL9 167 aaPredicted RBP8.59□□□□□ -1.03
LINC02249-201ENST00000455163 PAK3O75914 559 aaPredicted RBP8.58□□□□□ -1.04
LINC02249-201ENST00000455163 SLC39A7Q92504 469 aa8.58□□□□□ -1.04
LINC02249-201ENST00000455163 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
LINC02249-201ENST00000455163 MAMSTRQ6ZN01 415 aa8.56□□□□□ -1.04
LINC02249-201ENST00000455163 POTEFA5A3E0 1075 aa8.54□□□□□ -1.04
LINC02249-201ENST00000455163 ATN1P54259 1190 aaPredicted RBP8.51□□□□□ -1.05
LINC02249-201ENST00000455163 NPM1P06748 294 aaKnown RBP eCLIP8.5□□□□□ -1.05
LINC02249-201ENST00000455163 RB1CC1Q8TDY2 1594 aa8.49□□□□□ -1.05
LINC02249-201ENST00000455163 SCUBE2Q9NQ36 999 aa8.48□□□□□ -1.05
LINC02249-201ENST00000455163 CDAN1Q8IWY9 1227 aa8.46□□□□□ -1.06
LINC02249-201ENST00000455163 TRPC6Q9Y210 931 aa8.44□□□□□ -1.06
LINC02249-201ENST00000455163 BMP2KQ9NSY1 1161 aaPredicted RBP8.42□□□□□ -1.06
LINC02249-201ENST00000455163 CCDC61Q9Y6R9 512 aa8.42□□□□□ -1.06
LINC02249-201ENST00000455163 NACADO15069 1562 aa8.42□□□□□ -1.06
LINC02249-201ENST00000455163 UNC13AQ9UPW8 1703 aa8.41□□□□□ -1.06
LINC02249-201ENST00000455163 SPDYE4A6NLX3 237 aa8.41□□□□□ -1.06
LINC02249-201ENST00000455163 KIF12Q96FN5 646 aa8.39□□□□□ -1.07
LINC02249-201ENST00000455163 TSPYL2Q9H2G4 693 aaPredicted RBP8.39□□□□□ -1.07
LINC02249-201ENST00000455163 COLQQ9Y215 455 aaPredicted RBP8.39□□□□□ -1.07
LINC02249-201ENST00000455163 DCAF8L2P0C7V8 631 aa8.38□□□□□ -1.07
LINC02249-201ENST00000455163 ST18O60284 1047 aa8.33□□□□□ -1.08
LINC02249-201ENST00000455163 MAP3K13O43283 966 aa8.32□□□□□ -1.08
LINC02249-201ENST00000455163 TIE1P35590 1138 aa8.32□□□□□ -1.08
LINC02249-201ENST00000455163 BICRAQ9NZM4 1560 aa8.31□□□□□ -1.08
LINC02249-201ENST00000455163 MMRN1Q13201 1228 aa8.3□□□□□ -1.08
LINC02249-201ENST00000455163 TTLL13PA6NNM8 815 aa8.29□□□□□ -1.08
LINC02249-201ENST00000455163 SPNS2Q8IVW8 549 aa8.28□□□□□ -1.08
LINC02249-201ENST00000455163 CSRNP3Q8WYN3 585 aa8.28□□□□□ -1.08
LINC02249-201ENST00000455163 MYO15BQ96JP2 1530 aa8.27□□□□□ -1.09
LINC02249-201ENST00000455163 SEC24BO95487 1268 aa8.26□□□□□ -1.09
LINC02249-201ENST00000455163 SLAIN1Q8ND83 568 aa8.24□□□□□ -1.09
LINC02249-201ENST00000455163 ZCCHC6Q5VYS8 1495 aaKnown RBP8.23□□□□□ -1.09
LINC02249-201ENST00000455163 RASEFQ8IZ41 740 aa8.22□□□□□ -1.09
LINC02249-201ENST00000455163 TRIM35Q9UPQ4 493 aa8.22□□□□□ -1.09
LINC02249-201ENST00000455163 IER5LQ5T953 404 aa8.21□□□□□ -1.1
LINC02249-201ENST00000455163 PROM2Q8N271 834 aa8.2□□□□□ -1.1
LINC02249-201ENST00000455163 DCAF1Q9Y4B6 1507 aa8.18□□□□□ -1.1
LINC02249-201ENST00000455163 SCRIBQ14160 1630 aa8.17□□□□□ -1.1
LINC02249-201ENST00000455163 MARVELD3Q96A59 401 aa8.13□□□□□ -1.11
LINC02249-201ENST00000455163 SGIP1Q9BQI5 828 aa8.13□□□□□ -1.11
LINC02249-201ENST00000455163 TMEM121BQ9BXQ6 578 aaPredicted RBP8.13□□□□□ -1.11
LINC02249-201ENST00000455163 IRX5P78411 483 aaPredicted RBP8.12□□□□□ -1.11
LINC02249-201ENST00000455163 PCDHB13Q9Y5F0 798 aa8.12□□□□□ -1.11
LINC02249-201ENST00000455163 CC2D2AQ9P2K1 1620 aa8.11□□□□□ -1.11
LINC02249-201ENST00000455163 IFNL1Q8IU54 200 aa8.11□□□□□ -1.11
LINC02249-201ENST00000455163 SHROOM4Q9ULL8 1493 aa8.09□□□□□ -1.11
LINC02249-201ENST00000455163 PLCG2P16885 1265 aa8.08□□□□□ -1.12
LINC02249-201ENST00000455163 EIF4G1Q04637 1599 aaKnown RBP8.08□□□□□ -1.12
LINC02249-201ENST00000455163 POTEB3A0JP26 581 aa8.07□□□□□ -1.12
LINC02249-201ENST00000455163 POTEBQ6S5H4 581 aa8.07□□□□□ -1.12
LINC02249-201ENST00000455163 TMEM106CQ9BVX2 250 aa8.07□□□□□ -1.12
LINC02249-201ENST00000455163 CECR2Q9BXF3 1484 aa8.06□□□□□ -1.12
LINC02249-201ENST00000455163 MIER1Q8N108 512 aa8.06□□□□□ -1.12
LINC02249-201ENST00000455163 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
LINC02249-201ENST00000455163 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
LINC02249-201ENST00000455163 SNPHO15079 494 aa8.03□□□□□ -1.12
LINC02249-201ENST00000455163 NUBP1P53384 320 aa8.03□□□□□ -1.12
LINC02249-201ENST00000455163 OCEL1Q9H607 264 aa8.01□□□□□ -1.13
LINC02249-201ENST00000455163 EIF2AK3Q9NZJ5 1116 aaKnown RBP8□□□□□ -1.13
LINC02249-201ENST00000455163 PLEKHG5O94827 1062 aa7.98□□□□□ -1.13
LINC02249-201ENST00000455163 HS3ST6Q96QI5 342 aa7.98□□□□□ -1.13
LINC02249-201ENST00000455163 EMP3P54852 163 aa7.97□□□□□ -1.13
LINC02249-201ENST00000455163 FAM205CA6NFA0 338 aa7.94□□□□□ -1.14
LINC02249-201ENST00000455163 PDCD7Q8N8D1 485 aaKnown RBP7.93□□□□□ -1.14
LINC02249-201ENST00000455163 PLCD3Q8N3E9 789 aa7.91□□□□□ -1.14
LINC02249-201ENST00000455163 FAM212AQ96EL1 285 aa7.88□□□□□ -1.15
LINC02249-201ENST00000455163 PCDHB8Q9UN66 801 aa7.88□□□□□ -1.15
LINC02249-201ENST00000455163 PYGBP11216 843 aa7.85□□□□□ -1.15
LINC02249-201ENST00000455163 C3orf67Q6ZVT6 689 aa7.84□□□□□ -1.15
LINC02249-201ENST00000455163 ZBTB47Q9UFB7 747 aaPredicted RBP7.83□□□□□ -1.16
LINC02249-201ENST00000455163 HOXB3P14651 431 aaPredicted RBP7.82□□□□□ -1.16
LINC02249-201ENST00000455163 L3MBTL3Q96JM7 780 aaPredicted RBP7.82□□□□□ -1.16
LINC02249-201ENST00000455163 EHMT2Q96KQ7 1210 aa7.82□□□□□ -1.16
LINC02249-201ENST00000455163 RNF166Q96A37 237 aaPredicted RBP7.79□□□□□ -1.16
LINC02249-201ENST00000455163 DCAF8Q5TAQ9 597 aa7.78□□□□□ -1.16
LINC02249-201ENST00000455163 ILDR1Q86SU0 546 aaPredicted RBP7.78□□□□□ -1.16
LINC02249-201ENST00000455163 NCAPD3P42695 1498 aa7.77□□□□□ -1.17
LINC02249-201ENST00000455163 ATAD2BQ9ULI0 1458 aa7.77□□□□□ -1.17
LINC02249-201ENST00000455163 SMARCA4P51532 1647 aa7.77□□□□□ -1.17
LINC02249-201ENST00000455163 HOXB1P14653 301 aaPredicted RBP7.76□□□□□ -1.17
LINC02249-201ENST00000455163 DPY19L2Q6NUT2 758 aa7.76□□□□□ -1.17
LINC02249-201ENST00000455163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC02249-201ENST00000455163 MKRN3Q13064 507 aaKnown RBP7.74□□□□□ -1.17
LINC02249-201ENST00000455163 DNAJC5Q9H3Z4 198 aa7.74□□□□□ -1.17
LINC02249-201ENST00000455163 NESP48681 1621 aa7.73□□□□□ -1.17
LINC02249-201ENST00000455163 MYT1LQ9UL68 1186 aa7.72□□□□□ -1.17
LINC02249-201ENST00000455163 HMGXB3Q12766 1538 aa7.72□□□□□ -1.17
LINC02249-201ENST00000455163 SMARCA2P51531 1590 aa7.71□□□□□ -1.17
LINC02249-201ENST00000455163 ERBB3P21860 1342 aa7.71□□□□□ -1.18
LINC02249-201ENST00000455163 ERCC6Q03468 1493 aa7.7□□□□□ -1.18
LINC02249-201ENST00000455163 CUX2O14529 1486 aa7.69□□□□□ -1.18
LINC02249-201ENST00000455163 BAZ1AQ9NRL2 1556 aaPredicted RBP7.69□□□□□ -1.18
LINC02249-201ENST00000455163 MROH2BQ7Z745 1585 aa7.68□□□□□ -1.18
LINC02249-201ENST00000455163 GOLGA2Q08379 1002 aa7.68□□□□□ -1.18
LINC02249-201ENST00000455163 ZNF467Q7Z7K2 595 aaPredicted RBP7.68□□□□□ -1.18
LINC02249-201ENST00000455163 BAZ1BQ9UIG0 1483 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms