RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ABCC10Q5T3U5 1492 aa31.16■■■□□ 2.58
UBE2D4-209ENST00000454428 RUSC2Q8N2Y8 1516 aa31.16■■■□□ 2.58
UBE2D4-209ENST00000454428 MAPKBP1O60336 1514 aa31.1■■■□□ 2.57
UBE2D4-209ENST00000454428 FAM69CQ0P6D2 419 aa31.1■■■□□ 2.57
UBE2D4-209ENST00000454428 DIP2BQ9P265 1576 aa31.09■■■□□ 2.57
UBE2D4-209ENST00000454428 ADCY10Q96PN6 1610 aa31.07■■■□□ 2.56
UBE2D4-209ENST00000454428 NPM1P06748 294 aaKnown RBP eCLIP30.96■■■□□ 2.55
UBE2D4-209ENST00000454428 KDM4FA0A1W2PPD8 638 aa30.94■■■□□ 2.54
UBE2D4-209ENST00000454428 KDM6BO15054 1643 aa30.92■■■□□ 2.54
UBE2D4-209ENST00000454428 KIAA0586Q9BVV6 1533 aa30.88■■■□□ 2.53
UBE2D4-209ENST00000454428 TSPOAP1O95153 1857 aa30.88■■■□□ 2.53
UBE2D4-209ENST00000454428 IGF1RP08069 1367 aa30.82■■■□□ 2.52
UBE2D4-209ENST00000454428 CUL7Q14999 1698 aa30.76■■■□□ 2.51
UBE2D4-209ENST00000454428 PTPRGP23470 1445 aa30.69■■■□□ 2.5
UBE2D4-209ENST00000454428 PPRC1Q5VV67 1664 aaKnown RBP30.68■■■□□ 2.5
UBE2D4-209ENST00000454428 KIF27Q86VH2 1401 aa30.68■■■□□ 2.5
UBE2D4-209ENST00000454428 ABCC2Q92887 1545 aa30.64■■■□□ 2.5
UBE2D4-209ENST00000454428 GLI2P10070 1586 aa30.61■■■□□ 2.49
UBE2D4-209ENST00000454428 ASXL2Q76L83 1435 aa30.6■■■□□ 2.49
UBE2D4-209ENST00000454428 TNIKQ9UKE5 1360 aa30.59■■■□□ 2.49
UBE2D4-209ENST00000454428 TTBK1Q5TCY1 1321 aaPredicted RBP30.57■■■□□ 2.48
UBE2D4-209ENST00000454428 ILDR1Q86SU0 546 aaPredicted RBP30.56■■■□□ 2.48
UBE2D4-209ENST00000454428 PLB1Q6P1J6 1458 aa30.56■■■□□ 2.48
UBE2D4-209ENST00000454428 CARMIL1Q5VZK9 1371 aa30.55■■■□□ 2.48
UBE2D4-209ENST00000454428 CARMIL2Q6F5E8 1435 aa30.53■■■□□ 2.48
UBE2D4-209ENST00000454428 UHRF1BP1LA0JNW5 1464 aa30.52■■■□□ 2.48
UBE2D4-209ENST00000454428 ADGRL1O94910 1474 aa30.51■■■□□ 2.48
UBE2D4-209ENST00000454428 COL17A1Q9UMD9 1497 aaPredicted RBP30.51■■■□□ 2.48
UBE2D4-209ENST00000454428 IQGAP2Q13576 1575 aa30.5■■■□□ 2.47
UBE2D4-209ENST00000454428 DISP1Q96F81 1524 aa30.47■■■□□ 2.47
UBE2D4-209ENST00000454428 UACAQ9BZF9 1416 aa30.46■■■□□ 2.47
UBE2D4-209ENST00000454428 MAP3K4Q9Y6R4 1608 aa30.44■■■□□ 2.46
UBE2D4-209ENST00000454428 EPRSP07814 1512 aaKnown RBP30.43■■■□□ 2.46
UBE2D4-209ENST00000454428 KDM5BQ9UGL1 1544 aa30.41■■■□□ 2.46
UBE2D4-209ENST00000454428 ZCCHC11Q5TAX3 1644 aaKnown RBP30.36■■■□□ 2.45
UBE2D4-209ENST00000454428 UGGT2Q9NYU1 1516 aa30.32■■■□□ 2.44
UBE2D4-209ENST00000454428 HECW2Q9P2P5 1572 aa30.3■■■□□ 2.44
UBE2D4-209ENST00000454428 TEX14Q8IWB6 1497 aa30.29■■■□□ 2.44
UBE2D4-209ENST00000454428 KIAA0556O60303 1618 aa30.27■■■□□ 2.44
UBE2D4-209ENST00000454428 RAPGEF2Q9Y4G8 1499 aa30.21■■■□□ 2.43
UBE2D4-209ENST00000454428 WDR7Q9Y4E6 1490 aa30.19■■■□□ 2.42
UBE2D4-209ENST00000454428 MAGI3Q5TCQ9 1506 aa30.09■■■□□ 2.41
UBE2D4-209ENST00000454428 CFAP43Q8NDM7 1665 aa30.07■■■□□ 2.41
UBE2D4-209ENST00000454428 CD109Q6YHK3 1445 aa30.05■■■□□ 2.4
UBE2D4-209ENST00000454428 ABCA8O94911 1581 aa30.05■■■□□ 2.4
UBE2D4-209ENST00000454428 CTTNBP2Q8WZ74 1663 aa30.03■■■□□ 2.4
UBE2D4-209ENST00000454428 KIF21BO75037 1637 aa29.98■■■□□ 2.39
UBE2D4-209ENST00000454428 KCNH8Q96L42 1107 aa29.97■■■□□ 2.39
UBE2D4-209ENST00000454428 GOLGA3Q08378 1498 aa29.93■■■□□ 2.38
UBE2D4-209ENST00000454428 ARAP3Q8WWN8 1544 aa29.88■■■□□ 2.37
UBE2D4-209ENST00000454428 PRXQ9BXM0 1461 aa29.8■■■□□ 2.36
UBE2D4-209ENST00000454428 ADAMTSL3P82987 1691 aa29.79■■■□□ 2.36
UBE2D4-209ENST00000454428 ATP10BO94823 1461 aa29.78■■■□□ 2.36
UBE2D4-209ENST00000454428 ABCA9Q8IUA7 1624 aa29.76■■■□□ 2.35
UBE2D4-209ENST00000454428 PTPRMP28827 1452 aa29.75■■■□□ 2.35
UBE2D4-209ENST00000454428 FBXO41Q8TF61 875 aa29.74■■■□□ 2.35
UBE2D4-209ENST00000454428 ARID3CA6NKF2 412 aa29.73■■■□□ 2.35
UBE2D4-209ENST00000454428 PHLDB1Q86UU1 1377 aa29.67■■■□□ 2.34
UBE2D4-209ENST00000454428 RAPGEF3O95398 923 aa29.67■■■□□ 2.34
UBE2D4-209ENST00000454428 FRMPD1Q5SYB0 1578 aa29.67■■■□□ 2.34
UBE2D4-209ENST00000454428 P3H3Q8IVL6 736 aa29.65■■■□□ 2.34
UBE2D4-209ENST00000454428 BCORL1Q5H9F3 1711 aa29.65■■■□□ 2.34
UBE2D4-209ENST00000454428 NEO1Q92859 1461 aa29.62■■■□□ 2.33
UBE2D4-209ENST00000454428 MADDQ8WXG6 1647 aa29.61■■■□□ 2.33
UBE2D4-209ENST00000454428 SAMD9Q5K651 1589 aa29.6■■■□□ 2.33
UBE2D4-209ENST00000454428 PCF11O94913 1555 aaKnown RBP29.58■■■□□ 2.33
UBE2D4-209ENST00000454428 RAPGEF6Q8TEU7 1601 aa29.57■■■□□ 2.32
UBE2D4-209ENST00000454428 LMTK3Q96Q04 1460 aa29.57■■■□□ 2.32
UBE2D4-209ENST00000454428 NUP153P49790 1475 aaKnown RBP29.49■■■□□ 2.31
UBE2D4-209ENST00000454428 ARHGEF40Q8TER5 1519 aa29.49■■■□□ 2.31
UBE2D4-209ENST00000454428 FAM9AQ8IZU1 332 aaPredicted RBP29.48■■■□□ 2.31
UBE2D4-209ENST00000454428 RICTORQ6R327 1708 aa29.47■■■□□ 2.31
UBE2D4-209ENST00000454428 RIMS1Q86UR5 1692 aaKnown RBP29.47■■■□□ 2.31
UBE2D4-209ENST00000454428 ARID4BQ4LE39 1312 aaPredicted RBP29.46■■■□□ 2.31
UBE2D4-209ENST00000454428 SIGLEC1Q9BZZ2 1709 aa29.41■■■□□ 2.3
UBE2D4-209ENST00000454428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.4■■■□□ 2.3
UBE2D4-209ENST00000454428 HNRNPUL2Q1KMD3 747 aaKnown RBP29.4■■■□□ 2.3
UBE2D4-209ENST00000454428 DENND4BO75064 1496 aaPredicted RBP29.4■■■□□ 2.3
UBE2D4-209ENST00000454428 FHOD3Q2V2M9 1422 aa29.38■■■□□ 2.29
UBE2D4-209ENST00000454428 AKNAQ7Z591 1439 aa29.37■■■□□ 2.29
UBE2D4-209ENST00000454428 HSPA2P54652 639 aa29.34■■■□□ 2.29
UBE2D4-209ENST00000454428 CSRNP3Q8WYN3 585 aa29.34■■■□□ 2.29
UBE2D4-209ENST00000454428 FANCAO15360 1455 aa29.34■■■□□ 2.29
UBE2D4-209ENST00000454428 ZMYM4Q5VZL5 1548 aa29.34■■■□□ 2.29
UBE2D4-209ENST00000454428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.34■■■□□ 2.29
UBE2D4-209ENST00000454428 CFAP74Q9C0B2 1584 aa29.31■■■□□ 2.28
UBE2D4-209ENST00000454428 TTC37Q6PGP7 1564 aa29.3■■■□□ 2.28
UBE2D4-209ENST00000454428 YEATS2Q9ULM3 1422 aa29.3■■■□□ 2.28
UBE2D4-209ENST00000454428 PLEKHD1A6NEE1 506 aa29.27■■■□□ 2.28
UBE2D4-209ENST00000454428 ZFYVE16Q7Z3T8 1539 aa29.26■■■□□ 2.27
UBE2D4-209ENST00000454428 POGZQ7Z3K3 1410 aa29.24■■■□□ 2.27
UBE2D4-209ENST00000454428 EFCAB5A4FU69 1503 aa29.24■■■□□ 2.27
UBE2D4-209ENST00000454428 RANGAP1P46060 587 aaPredicted RBP29.23■■■□□ 2.27
UBE2D4-209ENST00000454428 PLPPR3Q6T4P5 718 aa29.23■■■□□ 2.27
UBE2D4-209ENST00000454428 HECW1Q76N89 1606 aa29.22■■■□□ 2.27
UBE2D4-209ENST00000454428 MAGI2Q86UL8 1455 aa29.2■■■□□ 2.26
UBE2D4-209ENST00000454428 FER1L4A9Z1Z3 1794 aa29.2■■■□□ 2.26
UBE2D4-209ENST00000454428 CERKQ8TCT0 537 aa29.17■■■□□ 2.26
UBE2D4-209ENST00000454428 CDK13Q14004 1512 aaKnown RBP29.15■■■□□ 2.26
UBE2D4-209ENST00000454428 MLECQ14165 292 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms