RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
TSFM-204ENST00000454289 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
TSFM-204ENST00000454289 APLP2Q06481 763 aa20.19■□□□□ 0.82
TSFM-204ENST00000454289 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
TSFM-204ENST00000454289 EIF4G3O43432 1585 aaKnown RBP20.16■□□□□ 0.82
TSFM-204ENST00000454289 EFCAB5A4FU69 1503 aa20.14■□□□□ 0.82
TSFM-204ENST00000454289 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
TSFM-204ENST00000454289 FHOD3Q2V2M9 1422 aa20.09■□□□□ 0.81
TSFM-204ENST00000454289 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
TSFM-204ENST00000454289 SAMD9Q5K651 1589 aa20.07■□□□□ 0.8
TSFM-204ENST00000454289 KANK4Q5T7N3 995 aaPredicted RBP20.07■□□□□ 0.8
TSFM-204ENST00000454289 PCF11O94913 1555 aaKnown RBP20.04■□□□□ 0.8
TSFM-204ENST00000454289 TIAM1Q13009 1591 aa20.01■□□□□ 0.79
TSFM-204ENST00000454289 MAP3K1Q13233 1512 aa20.01■□□□□ 0.79
TSFM-204ENST00000454289 IQGAP2Q13576 1575 aa20.01■□□□□ 0.79
TSFM-204ENST00000454289 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
TSFM-204ENST00000454289 GRIN2AQ12879 1464 aa19.98■□□□□ 0.79
TSFM-204ENST00000454289 FYCO1Q9BQS8 1478 aa19.97■□□□□ 0.79
TSFM-204ENST00000454289 CASKIN1Q8WXD9 1431 aa19.97■□□□□ 0.79
TSFM-204ENST00000454289 CFAP43Q8NDM7 1665 aa19.96■□□□□ 0.79
TSFM-204ENST00000454289 FMN1Q68DA7 1419 aa19.96■□□□□ 0.79
TSFM-204ENST00000454289 SYNJ2O15056 1496 aa19.94■□□□□ 0.78
TSFM-204ENST00000454289 KIAA0586Q9BVV6 1533 aa19.92■□□□□ 0.78
TSFM-204ENST00000454289 LRRC9Q6ZRR7 1453 aa19.91■□□□□ 0.78
TSFM-204ENST00000454289 UGGT2Q9NYU1 1516 aa19.91■□□□□ 0.78
TSFM-204ENST00000454289 ATP1B4Q9UN42 357 aaPredicted RBP19.9■□□□□ 0.78
TSFM-204ENST00000454289 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
TSFM-204ENST00000454289 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
TSFM-204ENST00000454289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
TSFM-204ENST00000454289 RRBP1Q9P2E9 1410 aaKnown RBP19.86■□□□□ 0.77
TSFM-204ENST00000454289 ZEB1P37275 1124 aaPredicted RBP19.85■□□□□ 0.77
TSFM-204ENST00000454289 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
TSFM-204ENST00000454289 LRRIQ1Q96JM4 1722 aa19.85■□□□□ 0.77
TSFM-204ENST00000454289 FBLN2P98095 1184 aa19.83■□□□□ 0.77
TSFM-204ENST00000454289 NUP160Q12769 1436 aa19.82■□□□□ 0.76
TSFM-204ENST00000454289 DISP1Q96F81 1524 aa19.82■□□□□ 0.76
TSFM-204ENST00000454289 KIAA0556O60303 1618 aa19.81■□□□□ 0.76
TSFM-204ENST00000454289 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
TSFM-204ENST00000454289 CCNB3Q8WWL7 1395 aa19.78■□□□□ 0.76
TSFM-204ENST00000454289 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
TSFM-204ENST00000454289 HECW1Q76N89 1606 aa19.75■□□□□ 0.75
TSFM-204ENST00000454289 CCDC18Q5T9S5 1454 aa19.71■□□□□ 0.75
TSFM-204ENST00000454289 CHD1O14646 1710 aa19.7■□□□□ 0.74
TSFM-204ENST00000454289 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
TSFM-204ENST00000454289 EPRSP07814 1512 aaKnown RBP19.68■□□□□ 0.74
TSFM-204ENST00000454289 JPH4Q96JJ6 628 aa19.68■□□□□ 0.74
TSFM-204ENST00000454289 MAGI3Q5TCQ9 1506 aa19.67■□□□□ 0.74
TSFM-204ENST00000454289 EHBP1L1Q8N3D4 1523 aa19.67■□□□□ 0.74
TSFM-204ENST00000454289 CDK13Q14004 1512 aaKnown RBP19.65■□□□□ 0.74
TSFM-204ENST00000454289 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.74
TSFM-204ENST00000454289 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.73
TSFM-204ENST00000454289 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
TSFM-204ENST00000454289 NCOA2Q15596 1464 aa19.63■□□□□ 0.73
TSFM-204ENST00000454289 NUP153P49790 1475 aaKnown RBP19.62■□□□□ 0.73
TSFM-204ENST00000454289 ITGAEP38570 1179 aa19.6■□□□□ 0.73
TSFM-204ENST00000454289 ARID3CA6NKF2 412 aa19.59■□□□□ 0.73
TSFM-204ENST00000454289 FGD6Q6ZV73 1430 aa19.59■□□□□ 0.73
TSFM-204ENST00000454289 ARHGEF11O15085 1522 aa19.59■□□□□ 0.73
TSFM-204ENST00000454289 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
TSFM-204ENST00000454289 PLB1Q6P1J6 1458 aa19.57■□□□□ 0.72
TSFM-204ENST00000454289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.56■□□□□ 0.72
TSFM-204ENST00000454289 MYOM3Q5VTT5 1437 aa19.55■□□□□ 0.72
TSFM-204ENST00000454289 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
TSFM-204ENST00000454289 SHROOM2Q13796 1616 aa19.52■□□□□ 0.72
TSFM-204ENST00000454289 ABCA8O94911 1581 aa19.51■□□□□ 0.71
TSFM-204ENST00000454289 DHX57Q6P158 1386 aaKnown RBP19.48■□□□□ 0.71
TSFM-204ENST00000454289 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
TSFM-204ENST00000454289 RAB3GAP2Q9H2M9 1393 aa19.46■□□□□ 0.71
TSFM-204ENST00000454289 CLASP1Q7Z460 1538 aa19.45■□□□□ 0.7
TSFM-204ENST00000454289 SETD5Q9C0A6 1442 aa19.45■□□□□ 0.7
TSFM-204ENST00000454289 PTPRGP23470 1445 aa19.44■□□□□ 0.7
TSFM-204ENST00000454289 TCOF1Q13428 1488 aaKnown RBP19.43■□□□□ 0.7
TSFM-204ENST00000454289 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
TSFM-204ENST00000454289 ERCC6L2Q5T890 1561 aa19.42■□□□□ 0.7
TSFM-204ENST00000454289 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
TSFM-204ENST00000454289 PTPRKQ15262 1439 aa19.42■□□□□ 0.7
TSFM-204ENST00000454289 MIA2Q96PC5 1412 aa19.4■□□□□ 0.7
TSFM-204ENST00000454289 ATP10BO94823 1461 aa19.39■□□□□ 0.69
TSFM-204ENST00000454289 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
TSFM-204ENST00000454289 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
TSFM-204ENST00000454289 KIF14Q15058 1648 aa19.36■□□□□ 0.69
TSFM-204ENST00000454289 UACAQ9BZF9 1416 aa19.33■□□□□ 0.69
TSFM-204ENST00000454289 HFM1A2PYH4 1435 aa19.32■□□□□ 0.68
TSFM-204ENST00000454289 PLEKHD1A6NEE1 506 aa19.3■□□□□ 0.68
TSFM-204ENST00000454289 ITSN2Q9NZM3 1697 aa19.29■□□□□ 0.68
TSFM-204ENST00000454289 MAPKBP1O60336 1514 aa19.29■□□□□ 0.68
TSFM-204ENST00000454289 GPATCH8Q9UKJ3 1502 aaKnown RBP19.29■□□□□ 0.68
TSFM-204ENST00000454289 NAIPQ13075 1403 aa19.28■□□□□ 0.68
TSFM-204ENST00000454289 ABCC2Q92887 1545 aa19.27■□□□□ 0.68
TSFM-204ENST00000454289 ABCC10Q5T3U5 1492 aa19.27■□□□□ 0.67
TSFM-204ENST00000454289 ZNF644Q9H582 1327 aaPredicted RBP19.26■□□□□ 0.67
TSFM-204ENST00000454289 DNMT1P26358 1616 aaKnown RBP19.24■□□□□ 0.67
TSFM-204ENST00000454289 DAPK1P53355 1430 aa19.23■□□□□ 0.67
TSFM-204ENST00000454289 CDC42BPAQ5VT25 1732 aa19.23■□□□□ 0.67
TSFM-204ENST00000454289 CHIC2Q9UKJ5 165 aa19.23■□□□□ 0.67
TSFM-204ENST00000454289 GCC2Q8IWJ2 1684 aa19.23■□□□□ 0.67
TSFM-204ENST00000454289 CAMSAP2Q08AD1 1489 aa19.23■□□□□ 0.67
TSFM-204ENST00000454289 AKNAQ7Z591 1439 aa19.22■□□□□ 0.67
TSFM-204ENST00000454289 CFDP1Q9UEE9 299 aaPredicted RBP19.22■□□□□ 0.67
TSFM-204ENST00000454289 ABCC5O15440 1437 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms