RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 FAM69CQ0P6D2 419 aa12.61□□□□□ -0.39
CHEK2-220ENST00000454252 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
CHEK2-220ENST00000454252 ABCC10Q5T3U5 1492 aa12.55□□□□□ -0.4
CHEK2-220ENST00000454252 KIF13AQ9H1H9 1805 aa12.54□□□□□ -0.4
CHEK2-220ENST00000454252 TTBK1Q5TCY1 1321 aaPredicted RBP12.54□□□□□ -0.4
CHEK2-220ENST00000454252 ADCY10Q96PN6 1610 aa12.52□□□□□ -0.4
CHEK2-220ENST00000454252 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHEK2-220ENST00000454252 IGF1RP08069 1367 aa12.52□□□□□ -0.41
CHEK2-220ENST00000454252 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
CHEK2-220ENST00000454252 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
CHEK2-220ENST00000454252 DIP2BQ9P265 1576 aa12.5□□□□□ -0.41
CHEK2-220ENST00000454252 KIAA0586Q9BVV6 1533 aa12.48□□□□□ -0.41
CHEK2-220ENST00000454252 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
CHEK2-220ENST00000454252 PTPRGP23470 1445 aa12.44□□□□□ -0.42
CHEK2-220ENST00000454252 KDM6BO15054 1643 aa12.42□□□□□ -0.42
CHEK2-220ENST00000454252 CARMIL1Q5VZK9 1371 aa12.41□□□□□ -0.42
CHEK2-220ENST00000454252 ASXL2Q76L83 1435 aa12.38□□□□□ -0.43
CHEK2-220ENST00000454252 TNIKQ9UKE5 1360 aa12.38□□□□□ -0.43
CHEK2-220ENST00000454252 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
CHEK2-220ENST00000454252 CUL7Q14999 1698 aa12.37□□□□□ -0.43
CHEK2-220ENST00000454252 TSPOAP1O95153 1857 aa12.36□□□□□ -0.43
CHEK2-220ENST00000454252 COL17A1Q9UMD9 1497 aaPredicted RBP12.35□□□□□ -0.43
CHEK2-220ENST00000454252 CARMIL2Q6F5E8 1435 aa12.34□□□□□ -0.43
CHEK2-220ENST00000454252 DISP1Q96F81 1524 aa12.33□□□□□ -0.44
CHEK2-220ENST00000454252 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
CHEK2-220ENST00000454252 IQGAP2Q13576 1575 aa12.31□□□□□ -0.44
CHEK2-220ENST00000454252 ILDR1Q86SU0 546 aaPredicted RBP12.31□□□□□ -0.44
CHEK2-220ENST00000454252 ADGRL1O94910 1474 aa12.31□□□□□ -0.44
CHEK2-220ENST00000454252 PLB1Q6P1J6 1458 aa12.31□□□□□ -0.44
CHEK2-220ENST00000454252 PPRC1Q5VV67 1664 aaKnown RBP12.31□□□□□ -0.44
CHEK2-220ENST00000454252 UHRF1BP1LA0JNW5 1464 aa12.3□□□□□ -0.44
CHEK2-220ENST00000454252 EPRSP07814 1512 aaKnown RBP12.3□□□□□ -0.44
CHEK2-220ENST00000454252 GLI2P10070 1586 aa12.28□□□□□ -0.44
CHEK2-220ENST00000454252 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.45
CHEK2-220ENST00000454252 RAPGEF2Q9Y4G8 1499 aa12.25□□□□□ -0.45
CHEK2-220ENST00000454252 UGGT2Q9NYU1 1516 aa12.24□□□□□ -0.45
CHEK2-220ENST00000454252 KIAA0556O60303 1618 aa12.22□□□□□ -0.45
CHEK2-220ENST00000454252 ZCCHC11Q5TAX3 1644 aaKnown RBP12.22□□□□□ -0.45
CHEK2-220ENST00000454252 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
CHEK2-220ENST00000454252 MAP3K4Q9Y6R4 1608 aa12.21□□□□□ -0.46
CHEK2-220ENST00000454252 WDR7Q9Y4E6 1490 aa12.21□□□□□ -0.46
CHEK2-220ENST00000454252 KCNH8Q96L42 1107 aa12.2□□□□□ -0.46
CHEK2-220ENST00000454252 TEX14Q8IWB6 1497 aa12.19□□□□□ -0.46
CHEK2-220ENST00000454252 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
CHEK2-220ENST00000454252 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
CHEK2-220ENST00000454252 P3H3Q8IVL6 736 aa12.14□□□□□ -0.47
CHEK2-220ENST00000454252 ABCA8O94911 1581 aa12.13□□□□□ -0.47
CHEK2-220ENST00000454252 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
CHEK2-220ENST00000454252 PRXQ9BXM0 1461 aa12.1□□□□□ -0.47
CHEK2-220ENST00000454252 GOLGA3Q08378 1498 aa12.09□□□□□ -0.47
CHEK2-220ENST00000454252 RAPGEF3O95398 923 aa12.07□□□□□ -0.48
CHEK2-220ENST00000454252 ATP10BO94823 1461 aa12.07□□□□□ -0.48
CHEK2-220ENST00000454252 KIF21BO75037 1637 aa12.06□□□□□ -0.48
CHEK2-220ENST00000454252 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
CHEK2-220ENST00000454252 CTTNBP2Q8WZ74 1663 aa12.04□□□□□ -0.48
CHEK2-220ENST00000454252 CFAP43Q8NDM7 1665 aa12.03□□□□□ -0.48
CHEK2-220ENST00000454252 ARAP3Q8WWN8 1544 aa12.02□□□□□ -0.48
CHEK2-220ENST00000454252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
CHEK2-220ENST00000454252 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
CHEK2-220ENST00000454252 PTPRMP28827 1452 aa12□□□□□ -0.49
CHEK2-220ENST00000454252 NUP153P49790 1475 aaKnown RBP11.97□□□□□ -0.49
CHEK2-220ENST00000454252 FHOD3Q2V2M9 1422 aa11.97□□□□□ -0.49
CHEK2-220ENST00000454252 ARID4BQ4LE39 1312 aaPredicted RBP11.97□□□□□ -0.49
CHEK2-220ENST00000454252 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
CHEK2-220ENST00000454252 ABCA9Q8IUA7 1624 aa11.97□□□□□ -0.49
CHEK2-220ENST00000454252 FRMPD1Q5SYB0 1578 aa11.96□□□□□ -0.49
CHEK2-220ENST00000454252 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
CHEK2-220ENST00000454252 FBXO41Q8TF61 875 aa11.95□□□□□ -0.5
CHEK2-220ENST00000454252 SAMD9Q5K651 1589 aa11.95□□□□□ -0.5
CHEK2-220ENST00000454252 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
CHEK2-220ENST00000454252 NEO1Q92859 1461 aa11.94□□□□□ -0.5
CHEK2-220ENST00000454252 RAPGEF6Q8TEU7 1601 aa11.93□□□□□ -0.5
CHEK2-220ENST00000454252 HSPA2P54652 639 aa11.93□□□□□ -0.5
CHEK2-220ENST00000454252 FAM9AQ8IZU1 332 aaPredicted RBP11.93□□□□□ -0.5
CHEK2-220ENST00000454252 MADDQ8WXG6 1647 aa11.93□□□□□ -0.5
CHEK2-220ENST00000454252 PHLDB1Q86UU1 1377 aa11.92□□□□□ -0.5
CHEK2-220ENST00000454252 LMTK3Q96Q04 1460 aa11.92□□□□□ -0.5
CHEK2-220ENST00000454252 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
CHEK2-220ENST00000454252 PCF11O94913 1555 aaKnown RBP11.9□□□□□ -0.5
CHEK2-220ENST00000454252 YEATS2Q9ULM3 1422 aa11.9□□□□□ -0.5
CHEK2-220ENST00000454252 AKNAQ7Z591 1439 aa11.89□□□□□ -0.51
CHEK2-220ENST00000454252 DENND4BO75064 1496 aaPredicted RBP11.89□□□□□ -0.51
CHEK2-220ENST00000454252 BCORL1Q5H9F3 1711 aa11.89□□□□□ -0.51
CHEK2-220ENST00000454252 ARHGEF40Q8TER5 1519 aa11.88□□□□□ -0.51
CHEK2-220ENST00000454252 MLECQ14165 292 aa11.88□□□□□ -0.51
CHEK2-220ENST00000454252 FANCAO15360 1455 aa11.88□□□□□ -0.51
CHEK2-220ENST00000454252 PLEKHD1A6NEE1 506 aa11.87□□□□□ -0.51
CHEK2-220ENST00000454252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHEK2-220ENST00000454252 TTC37Q6PGP7 1564 aa11.86□□□□□ -0.51
CHEK2-220ENST00000454252 SIGLEC1Q9BZZ2 1709 aa11.86□□□□□ -0.51
CHEK2-220ENST00000454252 CDK13Q14004 1512 aaKnown RBP11.86□□□□□ -0.51
CHEK2-220ENST00000454252 RIMS1Q86UR5 1692 aaKnown RBP11.84□□□□□ -0.51
CHEK2-220ENST00000454252 ZFYVE16Q7Z3T8 1539 aa11.82□□□□□ -0.52
CHEK2-220ENST00000454252 RICTORQ6R327 1708 aa11.82□□□□□ -0.52
CHEK2-220ENST00000454252 SCAPERQ9BY12 1400 aa11.81□□□□□ -0.52
CHEK2-220ENST00000454252 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
CHEK2-220ENST00000454252 ZMYM4Q5VZL5 1548 aa11.81□□□□□ -0.52
CHEK2-220ENST00000454252 POGZQ7Z3K3 1410 aa11.8□□□□□ -0.52
CHEK2-220ENST00000454252 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
CHEK2-220ENST00000454252 SENP3Q9H4L4 574 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms