RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 RUSC2Q8N2Y8 1516 aa41.58■■■■■ 4.25
LYSMD2-202ENST00000454181 KIF27Q86VH2 1401 aa41.56■■■■■ 4.24
LYSMD2-202ENST00000454181 IGF1RP08069 1367 aa41.52■■■■■ 4.24
LYSMD2-202ENST00000454181 KIAA0586Q9BVV6 1533 aa41.44■■■■■ 4.23
LYSMD2-202ENST00000454181 FAM69CQ0P6D2 419 aa41.39■■■■■ 4.22
LYSMD2-202ENST00000454181 CUL7Q14999 1698 aa41.39■■■■■ 4.22
LYSMD2-202ENST00000454181 KIF13AQ9H1H9 1805 aa41.37■■■■■ 4.21
LYSMD2-202ENST00000454181 ABCC10Q5T3U5 1492 aa41.3■■■■■ 4.2
LYSMD2-202ENST00000454181 CARMIL1Q5VZK9 1371 aa41.28■■■■■ 4.2
LYSMD2-202ENST00000454181 MAPKBP1O60336 1514 aa41.26■■■■■ 4.2
LYSMD2-202ENST00000454181 ADCY10Q96PN6 1610 aa41.24■■■■■ 4.19
LYSMD2-202ENST00000454181 TTBK1Q5TCY1 1321 aaPredicted RBP41.18■■■■■ 4.18
LYSMD2-202ENST00000454181 PTPRGP23470 1445 aa41.18■■■■■ 4.18
LYSMD2-202ENST00000454181 CARMIL2Q6F5E8 1435 aa41.13■■■■■ 4.17
LYSMD2-202ENST00000454181 DIP2BQ9P265 1576 aa41.12■■■■■ 4.17
LYSMD2-202ENST00000454181 TNIKQ9UKE5 1360 aa41.06■■■■■ 4.16
LYSMD2-202ENST00000454181 IQGAP2Q13576 1575 aa40.98■■■■■ 4.15
LYSMD2-202ENST00000454181 ABCC2Q92887 1545 aa40.9■■■■■ 4.14
LYSMD2-202ENST00000454181 KDM6BO15054 1643 aa40.88■■■■■ 4.13
LYSMD2-202ENST00000454181 TSPOAP1O95153 1857 aa40.86■■■■■ 4.13
LYSMD2-202ENST00000454181 RAPGEF2Q9Y4G8 1499 aa40.85■■■■■ 4.13
LYSMD2-202ENST00000454181 UACAQ9BZF9 1416 aa40.82■■■■■ 4.12
LYSMD2-202ENST00000454181 PLB1Q6P1J6 1458 aa40.81■■■■■ 4.12
LYSMD2-202ENST00000454181 ASXL2Q76L83 1435 aa40.8■■■■■ 4.12
LYSMD2-202ENST00000454181 UHRF1BP1LA0JNW5 1464 aa40.79■■■■■ 4.12
LYSMD2-202ENST00000454181 DISP1Q96F81 1524 aa40.77■■■■■ 4.12
LYSMD2-202ENST00000454181 UGGT2Q9NYU1 1516 aa40.7■■■■■ 4.11
LYSMD2-202ENST00000454181 GLI2P10070 1586 aa40.65■■■■■ 4.1
LYSMD2-202ENST00000454181 KDM5BQ9UGL1 1544 aa40.6■■■■■ 4.09
LYSMD2-202ENST00000454181 KDM4FA0A1W2PPD8 638 aa40.59■■■■■ 4.09
LYSMD2-202ENST00000454181 KIAA0556O60303 1618 aa40.58■■■■■ 4.09
LYSMD2-202ENST00000454181 EPRSP07814 1512 aaKnown RBP40.52■■■■■ 4.08
LYSMD2-202ENST00000454181 ZCCHC11Q5TAX3 1644 aaKnown RBP40.47■■■■■ 4.07
LYSMD2-202ENST00000454181 PPRC1Q5VV67 1664 aaKnown RBP40.47■■■■■ 4.07
LYSMD2-202ENST00000454181 GOLGA3Q08378 1498 aa40.46■■■■■ 4.07
LYSMD2-202ENST00000454181 TEX14Q8IWB6 1497 aa40.43■■■■■ 4.06
LYSMD2-202ENST00000454181 CTTNBP2Q8WZ74 1663 aa40.41■■■■■ 4.06
LYSMD2-202ENST00000454181 MAP3K4Q9Y6R4 1608 aa40.38■■■■■ 4.06
LYSMD2-202ENST00000454181 WDR7Q9Y4E6 1490 aa40.37■■■■■ 4.05
LYSMD2-202ENST00000454181 FAM9AQ8IZU1 332 aaPredicted RBP40.36■■■■■ 4.05
LYSMD2-202ENST00000454181 PRXQ9BXM0 1461 aa40.32■■■■■ 4.05
LYSMD2-202ENST00000454181 COL17A1Q9UMD9 1497 aaPredicted RBP40.31■■■■■ 4.04
LYSMD2-202ENST00000454181 KCNH8Q96L42 1107 aa40.29■■■■■ 4.04
LYSMD2-202ENST00000454181 ABCA8O94911 1581 aa40.23■■■■■ 4.03
LYSMD2-202ENST00000454181 ADGRL1O94910 1474 aa40.2■■■■■ 4.03
LYSMD2-202ENST00000454181 CD109Q6YHK3 1445 aa40.2■■■■■ 4.03
LYSMD2-202ENST00000454181 P3H3Q8IVL6 736 aa40.15■■■■■ 4.02
LYSMD2-202ENST00000454181 MAGI3Q5TCQ9 1506 aa40.11■■■■■ 4.01
LYSMD2-202ENST00000454181 CSRNP3Q8WYN3 585 aa40.1■■■■■ 4.01
LYSMD2-202ENST00000454181 ARID3CA6NKF2 412 aa40.08■■■■■ 4.01
LYSMD2-202ENST00000454181 CFAP43Q8NDM7 1665 aa40.08■■■■■ 4.01
LYSMD2-202ENST00000454181 ATP10BO94823 1461 aa39.95■■■■□ 3.99
LYSMD2-202ENST00000454181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.91■■■■□ 3.98
LYSMD2-202ENST00000454181 HNRNPUL2Q1KMD3 747 aaKnown RBP39.91■■■■□ 3.98
LYSMD2-202ENST00000454181 RANGAP1P46060 587 aaPredicted RBP39.86■■■■□ 3.97
LYSMD2-202ENST00000454181 EEA1Q15075 1411 aa39.83■■■■□ 3.97
LYSMD2-202ENST00000454181 SAMD9Q5K651 1589 aa39.83■■■■□ 3.97
LYSMD2-202ENST00000454181 ARAP3Q8WWN8 1544 aa39.8■■■■□ 3.96
LYSMD2-202ENST00000454181 PHLDB1Q86UU1 1377 aa39.79■■■■□ 3.96
LYSMD2-202ENST00000454181 RAPGEF6Q8TEU7 1601 aa39.77■■■■□ 3.96
LYSMD2-202ENST00000454181 ABCA9Q8IUA7 1624 aa39.73■■■■□ 3.95
LYSMD2-202ENST00000454181 HECW2Q9P2P5 1572 aa39.68■■■■□ 3.94
LYSMD2-202ENST00000454181 FHOD3Q2V2M9 1422 aa39.65■■■■□ 3.94
LYSMD2-202ENST00000454181 KIF21BO75037 1637 aa39.65■■■■□ 3.94
LYSMD2-202ENST00000454181 RAPGEF3O95398 923 aa39.64■■■■□ 3.94
LYSMD2-202ENST00000454181 NUP153P49790 1475 aaKnown RBP39.63■■■■□ 3.94
LYSMD2-202ENST00000454181 PLEKHD1A6NEE1 506 aa39.63■■■■□ 3.93
LYSMD2-202ENST00000454181 NEO1Q92859 1461 aa39.62■■■■□ 3.93
LYSMD2-202ENST00000454181 ILDR1Q86SU0 546 aaPredicted RBP39.62■■■■□ 3.93
LYSMD2-202ENST00000454181 ARID4BQ4LE39 1312 aaPredicted RBP39.49■■■■□ 3.91
LYSMD2-202ENST00000454181 EFCAB5A4FU69 1503 aa39.47■■■■□ 3.91
LYSMD2-202ENST00000454181 UBTFP17480 764 aaKnown RBP39.39■■■■□ 3.9
LYSMD2-202ENST00000454181 DENND4BO75064 1496 aaPredicted RBP39.38■■■■□ 3.9
LYSMD2-202ENST00000454181 EHMT2Q96KQ7 1210 aa39.37■■■■□ 3.89
LYSMD2-202ENST00000454181 AKNAQ7Z591 1439 aa39.37■■■■□ 3.89
LYSMD2-202ENST00000454181 PTPRMP28827 1452 aa39.37■■■■□ 3.89
LYSMD2-202ENST00000454181 FRMPD1Q5SYB0 1578 aa39.35■■■■□ 3.89
LYSMD2-202ENST00000454181 FANCAO15360 1455 aa39.35■■■■□ 3.89
LYSMD2-202ENST00000454181 ADAMTSL3P82987 1691 aa39.33■■■■□ 3.89
LYSMD2-202ENST00000454181 ATP1B4Q9UN42 357 aaPredicted RBP39.33■■■■□ 3.89
LYSMD2-202ENST00000454181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.31■■■■□ 3.88
LYSMD2-202ENST00000454181 CFAP74Q9C0B2 1584 aa39.29■■■■□ 3.88
LYSMD2-202ENST00000454181 BCORL1Q5H9F3 1711 aa39.24■■■■□ 3.87
LYSMD2-202ENST00000454181 CDK13Q14004 1512 aaKnown RBP39.24■■■■□ 3.87
LYSMD2-202ENST00000454181 TTC37Q6PGP7 1564 aa39.21■■■■□ 3.87
LYSMD2-202ENST00000454181 ARHGEF40Q8TER5 1519 aa39.21■■■■□ 3.87
LYSMD2-202ENST00000454181 FMN1Q68DA7 1419 aa39.2■■■■□ 3.87
LYSMD2-202ENST00000454181 RICTORQ6R327 1708 aa39.2■■■■□ 3.87
LYSMD2-202ENST00000454181 CDK11AQ9UQ88 783 aaPredicted RBP39.19■■■■□ 3.86
LYSMD2-202ENST00000454181 MADDQ8WXG6 1647 aa39.18■■■■□ 3.86
LYSMD2-202ENST00000454181 POGZQ7Z3K3 1410 aa39.16■■■■□ 3.86
LYSMD2-202ENST00000454181 PLCH2O75038 1416 aa39.13■■■■□ 3.85
LYSMD2-202ENST00000454181 CHIC1Q5VXU3 224 aa39.11■■■■□ 3.85
LYSMD2-202ENST00000454181 SCAPERQ9BY12 1400 aa39.1■■■■□ 3.85
LYSMD2-202ENST00000454181 MAGI2Q86UL8 1455 aa39.1■■■■□ 3.85
LYSMD2-202ENST00000454181 ZMYM4Q5VZL5 1548 aa39.09■■■■□ 3.85
LYSMD2-202ENST00000454181 ZFYVE16Q7Z3T8 1539 aa39.09■■■■□ 3.85
LYSMD2-202ENST00000454181 EFCAB2Q5VUJ9 269 aa39.09■■■■□ 3.85
LYSMD2-202ENST00000454181 HECW1Q76N89 1606 aa39.09■■■■□ 3.85
LYSMD2-202ENST00000454181 ARHGAP35Q9NRY4 1499 aa39.07■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms