RNA–Protein interactions for RNA: ENST00000453985.6

ABCA9-202, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5 BASIC

Gene ABCA9, Length 6,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-202ENST00000453985 GOLGA6L22H0YM25 854 aa11.48□□□□□ -0.57
ABCA9-202ENST00000453985 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
ABCA9-202ENST00000453985 NPM1P06748 294 aaKnown RBP eCLIP11.46□□□□□ -0.57
ABCA9-202ENST00000453985 WDR43Q15061 677 aaKnown RBP eCLIP11.46□□□□□ -0.57
ABCA9-202ENST00000453985 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
ABCA9-202ENST00000453985 C14orf37Q86TY3 774 aa11.44□□□□□ -0.58
ABCA9-202ENST00000453985 TMC1Q8TDI8 760 aa11.44□□□□□ -0.58
ABCA9-202ENST00000453985 DCAF1Q9Y4B6 1507 aa11.44□□□□□ -0.58
ABCA9-202ENST00000453985 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
ABCA9-202ENST00000453985 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
ABCA9-202ENST00000453985 CLSTN1O94985 981 aa11.43□□□□□ -0.58
ABCA9-202ENST00000453985 BECN1Q14457 450 aa11.42□□□□□ -0.58
ABCA9-202ENST00000453985 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
ABCA9-202ENST00000453985 NAP1L5Q96NT1 182 aaPredicted RBP11.4□□□□□ -0.58
ABCA9-202ENST00000453985 CLIP1P30622 1438 aa11.4□□□□□ -0.59
ABCA9-202ENST00000453985 WRNQ14191 1432 aaPredicted RBP eCLIP11.39□□□□□ -0.59
ABCA9-202ENST00000453985 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
ABCA9-202ENST00000453985 EEA1Q15075 1411 aa11.38□□□□□ -0.59
ABCA9-202ENST00000453985 MTUS2Q5JR59 1369 aa11.38□□□□□ -0.59
ABCA9-202ENST00000453985 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
ABCA9-202ENST00000453985 TONSLQ96HA7 1378 aa11.38□□□□□ -0.59
ABCA9-202ENST00000453985 NPHP1O15259 732 aa11.38□□□□□ -0.59
ABCA9-202ENST00000453985 SENP3Q9H4L4 574 aaPredicted RBP11.37□□□□□ -0.59
ABCA9-202ENST00000453985 PRM3Q9NNZ6 103 aa11.37□□□□□ -0.59
ABCA9-202ENST00000453985 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
ABCA9-202ENST00000453985 IRX6P78412 446 aaPredicted RBP11.36□□□□□ -0.59
ABCA9-202ENST00000453985 DDX10Q13206 875 aaKnown RBP11.36□□□□□ -0.59
ABCA9-202ENST00000453985 GOLGA6L6A8MZA4 724 aa11.35□□□□□ -0.59
ABCA9-202ENST00000453985 TSPY4P0CV99 314 aa11.35□□□□□ -0.59
ABCA9-202ENST00000453985 TSPY10P0CW01 314 aa11.35□□□□□ -0.59
ABCA9-202ENST00000453985 DDRGK1Q96HY6 314 aa11.35□□□□□ -0.59
ABCA9-202ENST00000453985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.35□□□□□ -0.59
ABCA9-202ENST00000453985 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
ABCA9-202ENST00000453985 CASC1Q6TDU7 716 aa11.33□□□□□ -0.6
ABCA9-202ENST00000453985 GOLGA3Q08378 1498 aa11.32□□□□□ -0.6
ABCA9-202ENST00000453985 NRDCO43847 1150 aa11.32□□□□□ -0.6
ABCA9-202ENST00000453985 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
ABCA9-202ENST00000453985 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
ABCA9-202ENST00000453985 KIF27Q86VH2 1401 aa11.31□□□□□ -0.6
ABCA9-202ENST00000453985 FGD1P98174 961 aa11.31□□□□□ -0.6
ABCA9-202ENST00000453985 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
ABCA9-202ENST00000453985 MRS2Q9HD23 443 aa11.3□□□□□ -0.6
ABCA9-202ENST00000453985 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
ABCA9-202ENST00000453985 CEP162Q5TB80 1403 aa11.29□□□□□ -0.6
ABCA9-202ENST00000453985 MYO15BQ96JP2 1530 aa11.28□□□□□ -0.6
ABCA9-202ENST00000453985 PNNQ9H307 717 aaKnown RBP11.27□□□□□ -0.61
ABCA9-202ENST00000453985 PLEKHD1A6NEE1 506 aa11.26□□□□□ -0.61
ABCA9-202ENST00000453985 ISY1Q9ULR0 285 aaKnown RBP11.26□□□□□ -0.61
ABCA9-202ENST00000453985 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
ABCA9-202ENST00000453985 CHAF1AQ13111 956 aaPredicted RBP11.25□□□□□ -0.61
ABCA9-202ENST00000453985 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
ABCA9-202ENST00000453985 TNIKQ9UKE5 1360 aa11.24□□□□□ -0.61
ABCA9-202ENST00000453985 CEP164Q9UPV0 1460 aa11.24□□□□□ -0.61
ABCA9-202ENST00000453985 KCNJ4P48050 445 aa11.24□□□□□ -0.61
ABCA9-202ENST00000453985 GOLGA6L4A6NEF3 574 aa11.23□□□□□ -0.61
ABCA9-202ENST00000453985 PPP1R15AO75807 674 aaPredicted RBP11.23□□□□□ -0.61
ABCA9-202ENST00000453985 L1TD1Q5T7N2 865 aaKnown RBP11.23□□□□□ -0.61
ABCA9-202ENST00000453985 NOC3LQ8WTT2 800 aaKnown RBP11.23□□□□□ -0.61
ABCA9-202ENST00000453985 RRP7BPQ9NSQ0 103 aa11.23□□□□□ -0.61
ABCA9-202ENST00000453985 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
ABCA9-202ENST00000453985 OS9Q13438 667 aaPredicted RBP11.22□□□□□ -0.61
ABCA9-202ENST00000453985 FTSJ3Q8IY81 847 aaKnown RBP11.22□□□□□ -0.61
ABCA9-202ENST00000453985 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
ABCA9-202ENST00000453985 LAS1LQ9Y4W2 734 aaKnown RBP11.21□□□□□ -0.61
ABCA9-202ENST00000453985 DRC7Q8IY82 874 aa11.21□□□□□ -0.61
ABCA9-202ENST00000453985 PDE4CQ08493 712 aa11.21□□□□□ -0.61
ABCA9-202ENST00000453985 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
ABCA9-202ENST00000453985 KIAA2012Q0VF49 1180 aa11.2□□□□□ -0.62
ABCA9-202ENST00000453985 ARID4BQ4LE39 1312 aaPredicted RBP11.2□□□□□ -0.62
ABCA9-202ENST00000453985 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
ABCA9-202ENST00000453985 MROH2BQ7Z745 1585 aa11.19□□□□□ -0.62
ABCA9-202ENST00000453985 SENP3-EIF4A1A0A087X0R7 540 aa11.19□□□□□ -0.62
ABCA9-202ENST00000453985 TNNT3P45378 269 aaPredicted RBP11.17□□□□□ -0.62
ABCA9-202ENST00000453985 CFDP1Q9UEE9 299 aaPredicted RBP11.17□□□□□ -0.62
ABCA9-202ENST00000453985 MSNP26038 577 aaKnown RBP11.16□□□□□ -0.62
ABCA9-202ENST00000453985 A0A0U1RQG5 324 aaPredicted RBP11.16□□□□□ -0.62
ABCA9-202ENST00000453985 CFAP53Q96M91 514 aa11.15□□□□□ -0.62
ABCA9-202ENST00000453985 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
ABCA9-202ENST00000453985 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.63
ABCA9-202ENST00000453985 CUX2O14529 1486 aa11.14□□□□□ -0.63
ABCA9-202ENST00000453985 ARID3AQ99856 593 aa11.14□□□□□ -0.63
ABCA9-202ENST00000453985 CCDC88BA6NC98 1476 aa11.14□□□□□ -0.63
ABCA9-202ENST00000453985 RGS3P49796 1198 aa11.13□□□□□ -0.63
ABCA9-202ENST00000453985 GNL2Q13823 731 aaKnown RBP11.13□□□□□ -0.63
ABCA9-202ENST00000453985 SOGA1O94964 1423 aa11.13□□□□□ -0.63
ABCA9-202ENST00000453985 HIRIP3Q9BW71 556 aaPredicted RBP11.13□□□□□ -0.63
ABCA9-202ENST00000453985 EIF4G2P78344 907 aaKnown RBP eCLIP11.12□□□□□ -0.63
ABCA9-202ENST00000453985 SMARCA2P51531 1590 aa11.12□□□□□ -0.63
ABCA9-202ENST00000453985 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
ABCA9-202ENST00000453985 FRAT1Q92837 279 aaPredicted RBP11.1□□□□□ -0.63
ABCA9-202ENST00000453985 MAPK8IP3Q9UPT6 1336 aa11.1□□□□□ -0.63
ABCA9-202ENST00000453985 KRI1Q8N9T8 703 aaKnown RBP11.09□□□□□ -0.63
ABCA9-202ENST00000453985 RGL3Q3MIN7 710 aa11.09□□□□□ -0.63
ABCA9-202ENST00000453985 ANO8Q9HCE9 1232 aaPredicted RBP11.08□□□□□ -0.63
ABCA9-202ENST00000453985 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
ABCA9-202ENST00000453985 PDS5BQ9NTI5 1447 aa11.06□□□□□ -0.64
ABCA9-202ENST00000453985 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
ABCA9-202ENST00000453985 GOLGA6L1Q8N7Z2 621 aa11.05□□□□□ -0.64
ABCA9-202ENST00000453985 HSCBQ8IWL3 235 aa11.05□□□□□ -0.64
ABCA9-202ENST00000453985 ABCC8Q09428 1581 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms