RNA–Protein interactions for RNA: ENST00000449405.1

LINC01939-202, Transcript of long intergenic non-protein coding RNA 1939, humanhuman

TSL 3

Gene LINC01939, Length 368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01939-202ENST00000449405 IGF1RP08069 1367 aa27.09■■□□□ 1.93
LINC01939-202ENST00000449405 RUSC2Q8N2Y8 1516 aa27.08■■□□□ 1.93
LINC01939-202ENST00000449405 NPM1P06748 294 aaKnown RBP eCLIP27.07■■□□□ 1.92
LINC01939-202ENST00000449405 FAM69CQ0P6D2 419 aa27.07■■□□□ 1.92
LINC01939-202ENST00000449405 ABCC10Q5T3U5 1492 aa27.02■■□□□ 1.92
LINC01939-202ENST00000449405 KIAA0586Q9BVV6 1533 aa27.01■■□□□ 1.91
LINC01939-202ENST00000449405 MAPKBP1O60336 1514 aa26.97■■□□□ 1.91
LINC01939-202ENST00000449405 KIF27Q86VH2 1401 aa26.97■■□□□ 1.91
LINC01939-202ENST00000449405 ADCY10Q96PN6 1610 aa26.96■■□□□ 1.91
LINC01939-202ENST00000449405 DIP2BQ9P265 1576 aa26.88■■□□□ 1.89
LINC01939-202ENST00000449405 CUL7Q14999 1698 aa26.88■■□□□ 1.89
LINC01939-202ENST00000449405 CARMIL1Q5VZK9 1371 aa26.86■■□□□ 1.89
LINC01939-202ENST00000449405 PTPRGP23470 1445 aa26.84■■□□□ 1.89
LINC01939-202ENST00000449405 TTBK1Q5TCY1 1321 aaPredicted RBP26.77■■□□□ 1.88
LINC01939-202ENST00000449405 TNIKQ9UKE5 1360 aa26.75■■□□□ 1.87
LINC01939-202ENST00000449405 TSPOAP1O95153 1857 aa26.73■■□□□ 1.87
LINC01939-202ENST00000449405 KDM4FA0A1W2PPD8 638 aa26.73■■□□□ 1.87
LINC01939-202ENST00000449405 CARMIL2Q6F5E8 1435 aa26.73■■□□□ 1.87
LINC01939-202ENST00000449405 KDM6BO15054 1643 aa26.71■■□□□ 1.87
LINC01939-202ENST00000449405 ABCC2Q92887 1545 aa26.69■■□□□ 1.86
LINC01939-202ENST00000449405 IQGAP2Q13576 1575 aa26.64■■□□□ 1.86
LINC01939-202ENST00000449405 ASXL2Q76L83 1435 aa26.64■■□□□ 1.85
LINC01939-202ENST00000449405 UHRF1BP1LA0JNW5 1464 aa26.62■■□□□ 1.85
LINC01939-202ENST00000449405 PLB1Q6P1J6 1458 aa26.62■■□□□ 1.85
LINC01939-202ENST00000449405 DISP1Q96F81 1524 aa26.61■■□□□ 1.85
LINC01939-202ENST00000449405 UACAQ9BZF9 1416 aa26.6■■□□□ 1.85
LINC01939-202ENST00000449405 GLI2P10070 1586 aa26.58■■□□□ 1.85
LINC01939-202ENST00000449405 RAPGEF2Q9Y4G8 1499 aa26.55■■□□□ 1.84
LINC01939-202ENST00000449405 PPRC1Q5VV67 1664 aaKnown RBP26.54■■□□□ 1.84
LINC01939-202ENST00000449405 UGGT2Q9NYU1 1516 aa26.51■■□□□ 1.83
LINC01939-202ENST00000449405 KDM5BQ9UGL1 1544 aa26.51■■□□□ 1.83
LINC01939-202ENST00000449405 COL17A1Q9UMD9 1497 aaPredicted RBP26.48■■□□□ 1.83
LINC01939-202ENST00000449405 EPRSP07814 1512 aaKnown RBP26.47■■□□□ 1.83
LINC01939-202ENST00000449405 KIAA0556O60303 1618 aa26.4■■□□□ 1.82
LINC01939-202ENST00000449405 MAP3K4Q9Y6R4 1608 aa26.39■■□□□ 1.82
LINC01939-202ENST00000449405 ZCCHC11Q5TAX3 1644 aaKnown RBP26.39■■□□□ 1.81
LINC01939-202ENST00000449405 TEX14Q8IWB6 1497 aa26.33■■□□□ 1.81
LINC01939-202ENST00000449405 ADGRL1O94910 1474 aa26.32■■□□□ 1.8
LINC01939-202ENST00000449405 WDR7Q9Y4E6 1490 aa26.3■■□□□ 1.8
LINC01939-202ENST00000449405 KCNH8Q96L42 1107 aa26.27■■□□□ 1.8
LINC01939-202ENST00000449405 GOLGA3Q08378 1498 aa26.25■■□□□ 1.79
LINC01939-202ENST00000449405 CTTNBP2Q8WZ74 1663 aa26.24■■□□□ 1.79
LINC01939-202ENST00000449405 ABCA8O94911 1581 aa26.23■■□□□ 1.79
LINC01939-202ENST00000449405 PRXQ9BXM0 1461 aa26.23■■□□□ 1.79
LINC01939-202ENST00000449405 CD109Q6YHK3 1445 aa26.22■■□□□ 1.79
LINC01939-202ENST00000449405 MAGI3Q5TCQ9 1506 aa26.19■■□□□ 1.78
LINC01939-202ENST00000449405 ILDR1Q86SU0 546 aaPredicted RBP26.16■■□□□ 1.78
LINC01939-202ENST00000449405 CFAP43Q8NDM7 1665 aa26.12■■□□□ 1.77
LINC01939-202ENST00000449405 P3H3Q8IVL6 736 aa26.11■■□□□ 1.77
LINC01939-202ENST00000449405 ARID3CA6NKF2 412 aa26.08■■□□□ 1.77
LINC01939-202ENST00000449405 ATP10BO94823 1461 aa26.07■■□□□ 1.76
LINC01939-202ENST00000449405 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
LINC01939-202ENST00000449405 HECW2Q9P2P5 1572 aa26.03■■□□□ 1.76
LINC01939-202ENST00000449405 CSRNP3Q8WYN3 585 aa26.02■■□□□ 1.76
LINC01939-202ENST00000449405 ARAP3Q8WWN8 1544 aa26.01■■□□□ 1.75
LINC01939-202ENST00000449405 PHLDB1Q86UU1 1377 aa25.94■■□□□ 1.74
LINC01939-202ENST00000449405 KIF21BO75037 1637 aa25.92■■□□□ 1.74
LINC01939-202ENST00000449405 RAPGEF3O95398 923 aa25.91■■□□□ 1.74
LINC01939-202ENST00000449405 ABCA9Q8IUA7 1624 aa25.91■■□□□ 1.74
LINC01939-202ENST00000449405 SAMD9Q5K651 1589 aa25.9■■□□□ 1.74
LINC01939-202ENST00000449405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.87■■□□□ 1.73
LINC01939-202ENST00000449405 HNRNPUL2Q1KMD3 747 aaKnown RBP25.87■■□□□ 1.73
LINC01939-202ENST00000449405 RAPGEF6Q8TEU7 1601 aa25.85■■□□□ 1.73
LINC01939-202ENST00000449405 NEO1Q92859 1461 aa25.83■■□□□ 1.73
LINC01939-202ENST00000449405 RANGAP1P46060 587 aaPredicted RBP25.82■■□□□ 1.72
LINC01939-202ENST00000449405 NUP153P49790 1475 aaKnown RBP25.81■■□□□ 1.72
LINC01939-202ENST00000449405 ADAMTSL3P82987 1691 aa25.77■■□□□ 1.72
LINC01939-202ENST00000449405 PLEKHD1A6NEE1 506 aa25.77■■□□□ 1.72
LINC01939-202ENST00000449405 FHOD3Q2V2M9 1422 aa25.76■■□□□ 1.71
LINC01939-202ENST00000449405 PTPRMP28827 1452 aa25.76■■□□□ 1.71
LINC01939-202ENST00000449405 EEA1Q15075 1411 aa25.74■■□□□ 1.71
LINC01939-202ENST00000449405 FRMPD1Q5SYB0 1578 aa25.72■■□□□ 1.71
LINC01939-202ENST00000449405 ARID4BQ4LE39 1312 aaPredicted RBP25.7■■□□□ 1.71
LINC01939-202ENST00000449405 BCORL1Q5H9F3 1711 aa25.66■■□□□ 1.7
LINC01939-202ENST00000449405 AKNAQ7Z591 1439 aa25.66■■□□□ 1.7
LINC01939-202ENST00000449405 DENND4BO75064 1496 aaPredicted RBP25.65■■□□□ 1.7
LINC01939-202ENST00000449405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.63■■□□□ 1.69
LINC01939-202ENST00000449405 FANCAO15360 1455 aa25.61■■□□□ 1.69
LINC01939-202ENST00000449405 MADDQ8WXG6 1647 aa25.6■■□□□ 1.69
LINC01939-202ENST00000449405 FBXO41Q8TF61 875 aa25.6■■□□□ 1.69
LINC01939-202ENST00000449405 RICTORQ6R327 1708 aa25.6■■□□□ 1.69
LINC01939-202ENST00000449405 EFCAB5A4FU69 1503 aa25.57■■□□□ 1.68
LINC01939-202ENST00000449405 ARHGEF40Q8TER5 1519 aa25.56■■□□□ 1.68
LINC01939-202ENST00000449405 LMTK3Q96Q04 1460 aa25.53■■□□□ 1.68
LINC01939-202ENST00000449405 TTC37Q6PGP7 1564 aa25.53■■□□□ 1.68
LINC01939-202ENST00000449405 PCF11O94913 1555 aaKnown RBP25.52■■□□□ 1.68
LINC01939-202ENST00000449405 YEATS2Q9ULM3 1422 aa25.51■■□□□ 1.67
LINC01939-202ENST00000449405 CDK13Q14004 1512 aaKnown RBP25.51■■□□□ 1.67
LINC01939-202ENST00000449405 CFAP74Q9C0B2 1584 aa25.51■■□□□ 1.67
LINC01939-202ENST00000449405 PLCH2O75038 1416 aa25.5■■□□□ 1.67
LINC01939-202ENST00000449405 RIMS1Q86UR5 1692 aaKnown RBP25.49■■□□□ 1.67
LINC01939-202ENST00000449405 ZMYM4Q5VZL5 1548 aa25.49■■□□□ 1.67
LINC01939-202ENST00000449405 MAGI2Q86UL8 1455 aa25.47■■□□□ 1.67
LINC01939-202ENST00000449405 POGZQ7Z3K3 1410 aa25.47■■□□□ 1.67
LINC01939-202ENST00000449405 SCAPERQ9BY12 1400 aa25.47■■□□□ 1.67
LINC01939-202ENST00000449405 SIGLEC1Q9BZZ2 1709 aa25.47■■□□□ 1.67
LINC01939-202ENST00000449405 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
LINC01939-202ENST00000449405 HSPA2P54652 639 aa25.46■■□□□ 1.67
LINC01939-202ENST00000449405 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
LINC01939-202ENST00000449405 ZFYVE16Q7Z3T8 1539 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms