RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 APLP2Q06481 763 aa24.74■■□□□ 1.55
AP000253.1-201ENST00000449339 CTTNBP2Q8WZ74 1663 aa24.73■■□□□ 1.55
AP000253.1-201ENST00000449339 P3H3Q8IVL6 736 aa24.67■■□□□ 1.54
AP000253.1-201ENST00000449339 GRIN2BQ13224 1484 aa24.66■■□□□ 1.54
AP000253.1-201ENST00000449339 ADAMTS12P58397 1594 aa24.64■■□□□ 1.53
AP000253.1-201ENST00000449339 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
AP000253.1-201ENST00000449339 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
AP000253.1-201ENST00000449339 FHOD3Q2V2M9 1422 aa24.59■■□□□ 1.53
AP000253.1-201ENST00000449339 KANK4Q5T7N3 995 aaPredicted RBP24.58■■□□□ 1.53
AP000253.1-201ENST00000449339 EFCAB5A4FU69 1503 aa24.55■■□□□ 1.52
AP000253.1-201ENST00000449339 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
AP000253.1-201ENST00000449339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
AP000253.1-201ENST00000449339 PCF11O94913 1555 aaKnown RBP24.49■■□□□ 1.51
AP000253.1-201ENST00000449339 SAMD9Q5K651 1589 aa24.47■■□□□ 1.51
AP000253.1-201ENST00000449339 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
AP000253.1-201ENST00000449339 TIAM1Q13009 1591 aa24.44■■□□□ 1.5
AP000253.1-201ENST00000449339 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
AP000253.1-201ENST00000449339 IQGAP2Q13576 1575 aa24.42■■□□□ 1.5
AP000253.1-201ENST00000449339 GRIN2AQ12879 1464 aa24.39■■□□□ 1.5
AP000253.1-201ENST00000449339 MAGI1Q96QZ7 1491 aaPredicted RBP24.39■■□□□ 1.49
AP000253.1-201ENST00000449339 HNRNPUL2Q1KMD3 747 aaKnown RBP24.38■■□□□ 1.49
AP000253.1-201ENST00000449339 MAP3K1Q13233 1512 aa24.38■■□□□ 1.49
AP000253.1-201ENST00000449339 CASKIN1Q8WXD9 1431 aa24.37■■□□□ 1.49
AP000253.1-201ENST00000449339 FYCO1Q9BQS8 1478 aa24.37■■□□□ 1.49
AP000253.1-201ENST00000449339 FMN1Q68DA7 1419 aa24.36■■□□□ 1.49
AP000253.1-201ENST00000449339 CFAP43Q8NDM7 1665 aa24.35■■□□□ 1.49
AP000253.1-201ENST00000449339 SYNJ2O15056 1496 aa24.33■■□□□ 1.48
AP000253.1-201ENST00000449339 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.48
AP000253.1-201ENST00000449339 FBLN2P98095 1184 aa24.33■■□□□ 1.48
AP000253.1-201ENST00000449339 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.48
AP000253.1-201ENST00000449339 KIAA0586Q9BVV6 1533 aa24.29■■□□□ 1.48
AP000253.1-201ENST00000449339 UGGT2Q9NYU1 1516 aa24.27■■□□□ 1.48
AP000253.1-201ENST00000449339 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
AP000253.1-201ENST00000449339 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
AP000253.1-201ENST00000449339 RRBP1Q9P2E9 1410 aaKnown RBP24.25■■□□□ 1.47
AP000253.1-201ENST00000449339 DISP1Q96F81 1524 aa24.19■■□□□ 1.46
AP000253.1-201ENST00000449339 PHLDB1Q86UU1 1377 aa24.18■■□□□ 1.46
AP000253.1-201ENST00000449339 CCNB3Q8WWL7 1395 aa24.18■■□□□ 1.46
AP000253.1-201ENST00000449339 KIAA0556O60303 1618 aa24.18■■□□□ 1.46
AP000253.1-201ENST00000449339 NUP160Q12769 1436 aa24.16■■□□□ 1.46
AP000253.1-201ENST00000449339 HECW1Q76N89 1606 aa24.1■■□□□ 1.45
AP000253.1-201ENST00000449339 MTUS2Q5JR59 1369 aa24.1■■□□□ 1.45
AP000253.1-201ENST00000449339 ITGAEP38570 1179 aa24.09■■□□□ 1.45
AP000253.1-201ENST00000449339 ARID3CA6NKF2 412 aa24.08■■□□□ 1.45
AP000253.1-201ENST00000449339 CHD1O14646 1710 aa24.06■■□□□ 1.44
AP000253.1-201ENST00000449339 JPH4Q96JJ6 628 aa24.06■■□□□ 1.44
AP000253.1-201ENST00000449339 EPRSP07814 1512 aaKnown RBP24.05■■□□□ 1.44
AP000253.1-201ENST00000449339 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
AP000253.1-201ENST00000449339 CCDC18Q5T9S5 1454 aa24.04■■□□□ 1.44
AP000253.1-201ENST00000449339 CDK13Q14004 1512 aaKnown RBP24.04■■□□□ 1.44
AP000253.1-201ENST00000449339 FAM50AQ14320 339 aaKnown RBP24.02■■□□□ 1.44
AP000253.1-201ENST00000449339 EHBP1L1Q8N3D4 1523 aa24■■□□□ 1.43
AP000253.1-201ENST00000449339 NCOA2Q15596 1464 aa23.98■■□□□ 1.43
AP000253.1-201ENST00000449339 RAPGEF6Q8TEU7 1601 aa23.98■■□□□ 1.43
AP000253.1-201ENST00000449339 SUPT6HQ7KZ85 1726 aaKnown RBP23.97■■□□□ 1.43
AP000253.1-201ENST00000449339 CARMIL2Q6F5E8 1435 aa23.97■■□□□ 1.43
AP000253.1-201ENST00000449339 NUP153P49790 1475 aaKnown RBP23.96■■□□□ 1.43
AP000253.1-201ENST00000449339 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
AP000253.1-201ENST00000449339 PLB1Q6P1J6 1458 aa23.93■■□□□ 1.42
AP000253.1-201ENST00000449339 ARHGEF11O15085 1522 aa23.89■■□□□ 1.42
AP000253.1-201ENST00000449339 MYOM3Q5VTT5 1437 aa23.89■■□□□ 1.41
AP000253.1-201ENST00000449339 PRG4Q92954 1404 aaPredicted RBP23.88■■□□□ 1.41
AP000253.1-201ENST00000449339 DHX57Q6P158 1386 aaKnown RBP23.85■■□□□ 1.41
AP000253.1-201ENST00000449339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.84■■□□□ 1.41
AP000253.1-201ENST00000449339 CLSPNQ9HAW4 1339 aa23.83■■□□□ 1.4
AP000253.1-201ENST00000449339 RAB3GAP2Q9H2M9 1393 aa23.81■■□□□ 1.4
AP000253.1-201ENST00000449339 ABCA8O94911 1581 aa23.8■■□□□ 1.4
AP000253.1-201ENST00000449339 PTPN23Q9H3S7 1636 aa23.79■■□□□ 1.4
AP000253.1-201ENST00000449339 SHROOM2Q13796 1616 aa23.79■■□□□ 1.4
AP000253.1-201ENST00000449339 SETD5Q9C0A6 1442 aa23.78■■□□□ 1.4
AP000253.1-201ENST00000449339 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
AP000253.1-201ENST00000449339 PTPRKQ15262 1439 aa23.75■■□□□ 1.39
AP000253.1-201ENST00000449339 PTPRGP23470 1445 aa23.75■■□□□ 1.39
AP000253.1-201ENST00000449339 CDK11AQ9UQ88 783 aaPredicted RBP23.75■■□□□ 1.39
AP000253.1-201ENST00000449339 TROQ12816 1431 aaPredicted RBP23.71■■□□□ 1.39
AP000253.1-201ENST00000449339 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
AP000253.1-201ENST00000449339 TCOF1Q13428 1488 aaKnown RBP23.7■■□□□ 1.38
AP000253.1-201ENST00000449339 ATP10BO94823 1461 aa23.69■■□□□ 1.38
AP000253.1-201ENST00000449339 KIF14Q15058 1648 aa23.68■■□□□ 1.38
AP000253.1-201ENST00000449339 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
AP000253.1-201ENST00000449339 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
AP000253.1-201ENST00000449339 DIEXFQ68CQ4 756 aaKnown RBP23.64■■□□□ 1.37
AP000253.1-201ENST00000449339 ADCY10Q96PN6 1610 aa23.62■■□□□ 1.37
AP000253.1-201ENST00000449339 ZNF644Q9H582 1327 aaPredicted RBP23.61■■□□□ 1.37
AP000253.1-201ENST00000449339 UACAQ9BZF9 1416 aa23.61■■□□□ 1.37
AP000253.1-201ENST00000449339 PLEKHD1A6NEE1 506 aa23.6■■□□□ 1.37
AP000253.1-201ENST00000449339 CHIC2Q9UKJ5 165 aa23.6■■□□□ 1.37
AP000253.1-201ENST00000449339 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
AP000253.1-201ENST00000449339 MAPKBP1O60336 1514 aa23.58■■□□□ 1.37
AP000253.1-201ENST00000449339 NAIPQ13075 1403 aa23.56■■□□□ 1.36
AP000253.1-201ENST00000449339 GPATCH8Q9UKJ3 1502 aaKnown RBP23.56■■□□□ 1.36
AP000253.1-201ENST00000449339 RRP7BPQ9NSQ0 103 aa23.55■■□□□ 1.36
AP000253.1-201ENST00000449339 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
AP000253.1-201ENST00000449339 CFDP1Q9UEE9 299 aaPredicted RBP23.53■■□□□ 1.36
AP000253.1-201ENST00000449339 ABCC2Q92887 1545 aa23.51■■□□□ 1.35
AP000253.1-201ENST00000449339 ABCC10Q5T3U5 1492 aa23.51■■□□□ 1.35
AP000253.1-201ENST00000449339 CDC42BPAQ5VT25 1732 aa23.5■■□□□ 1.35
AP000253.1-201ENST00000449339 DAPK1P53355 1430 aa23.5■■□□□ 1.35
AP000253.1-201ENST00000449339 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
AP000253.1-201ENST00000449339 CAMSAP2Q08AD1 1489 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms