RNA–Protein interactions for RNA: ENST00000448892.1

LINC00884-202, long intergenic non-protein coding RNA 884, humanhuman

TSL 5 BASIC

Gene LINC00884, Length 2,680 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00884-202ENST00000448892 MYT1LQ9UL68 1186 aa21.97■■□□□ 1.11
LINC00884-202ENST00000448892 HNRNPUQ00839 825 aaKnown RBP eCLIP21.88■■□□□ 1.09
LINC00884-202ENST00000448892 ANO8Q9HCE9 1232 aaPredicted RBP21.86■■□□□ 1.09
LINC00884-202ENST00000448892 SETD5Q9C0A6 1442 aa21.86■■□□□ 1.09
LINC00884-202ENST00000448892 PRXQ9BXM0 1461 aa21.84■■□□□ 1.09
LINC00884-202ENST00000448892 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.09
LINC00884-202ENST00000448892 NBR1Q14596 966 aa21.82■■□□□ 1.08
LINC00884-202ENST00000448892 PPP4R2Q9NY27 417 aa21.78■■□□□ 1.08
LINC00884-202ENST00000448892 TIMELESSQ9UNS1 1208 aa21.76■■□□□ 1.07
LINC00884-202ENST00000448892 PAK3O75914 559 aaPredicted RBP21.76■■□□□ 1.07
LINC00884-202ENST00000448892 NOP58Q9Y2X3 529 aaKnown RBP21.75■■□□□ 1.07
LINC00884-202ENST00000448892 B4GALNT3Q6L9W6 998 aa21.74■■□□□ 1.07
LINC00884-202ENST00000448892 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
LINC00884-202ENST00000448892 ARHGAP35Q9NRY4 1499 aa21.73■■□□□ 1.07
LINC00884-202ENST00000448892 ERICH6BQ5W0A0 696 aa21.72■■□□□ 1.07
LINC00884-202ENST00000448892 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
LINC00884-202ENST00000448892 FAM50AQ14320 339 aaKnown RBP21.69■■□□□ 1.06
LINC00884-202ENST00000448892 SALL2Q9Y467 1007 aaPredicted RBP21.69■■□□□ 1.06
LINC00884-202ENST00000448892 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
LINC00884-202ENST00000448892 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
LINC00884-202ENST00000448892 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
LINC00884-202ENST00000448892 TONSLQ96HA7 1378 aa21.6■■□□□ 1.05
LINC00884-202ENST00000448892 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
LINC00884-202ENST00000448892 CCDC184Q52MB2 194 aa21.58■■□□□ 1.05
LINC00884-202ENST00000448892 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
LINC00884-202ENST00000448892 IL27Q8NEV9 243 aa21.56■■□□□ 1.04
LINC00884-202ENST00000448892 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
LINC00884-202ENST00000448892 CCDC136Q96JN2 1154 aa21.54■■□□□ 1.04
LINC00884-202ENST00000448892 RTL5Q5HYW3 569 aaPredicted RBP21.52■■□□□ 1.04
LINC00884-202ENST00000448892 MAP3K1Q13233 1512 aa21.51■■□□□ 1.03
LINC00884-202ENST00000448892 RTN4Q9NQC3 1192 aaKnown RBP21.51■■□□□ 1.03
LINC00884-202ENST00000448892 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
LINC00884-202ENST00000448892 WASHC2AQ641Q2 1341 aa21.5■■□□□ 1.03
LINC00884-202ENST00000448892 IPO9Q96P70 1041 aaKnown RBP21.49■■□□□ 1.03
LINC00884-202ENST00000448892 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
LINC00884-202ENST00000448892 FAM9BQ8IZU0 186 aa21.49■■□□□ 1.03
LINC00884-202ENST00000448892 ANP32AP39687 249 aaKnown RBP21.46■■□□□ 1.03
LINC00884-202ENST00000448892 ZBTB47Q9UFB7 747 aaPredicted RBP21.44■■□□□ 1.02
LINC00884-202ENST00000448892 FHAD1B1AJZ9 1412 aa21.44■■□□□ 1.02
LINC00884-202ENST00000448892 ZBED9Q6R2W3 1325 aa21.43■■□□□ 1.02
LINC00884-202ENST00000448892 HSPA5P11021 654 aaKnown RBP21.42■■□□□ 1.02
LINC00884-202ENST00000448892 CUX1P39880 1505 aa21.4■■□□□ 1.02
LINC00884-202ENST00000448892 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.4■■□□□ 1.02
LINC00884-202ENST00000448892 MRS2Q9HD23 443 aa21.39■■□□□ 1.01
LINC00884-202ENST00000448892 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
LINC00884-202ENST00000448892 ATP1B4Q9UN42 357 aaPredicted RBP21.38■■□□□ 1.01
LINC00884-202ENST00000448892 KDM5BQ9UGL1 1544 aa21.38■■□□□ 1.01
LINC00884-202ENST00000448892 PRKRIP1Q9H875 184 aaPredicted RBP21.36■■□□□ 1.01
LINC00884-202ENST00000448892 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
LINC00884-202ENST00000448892 AKNAQ7Z591 1439 aa21.35■■□□□ 1.01
LINC00884-202ENST00000448892 CNTLNQ9NXG0 1405 aa21.34■■□□□ 1.01
LINC00884-202ENST00000448892 UACAQ9BZF9 1416 aa21.32■■□□□ 1
LINC00884-202ENST00000448892 P3H3Q8IVL6 736 aa21.32■■□□□ 1
LINC00884-202ENST00000448892 CFAP43Q8NDM7 1665 aa21.32■■□□□ 1
LINC00884-202ENST00000448892 NCOA2Q15596 1464 aa21.32■■□□□ 1
LINC00884-202ENST00000448892 C11orf95C9JLR9 678 aaPredicted RBP21.3■■□□□ 1
LINC00884-202ENST00000448892 PCF11O94913 1555 aaKnown RBP21.29■■□□□ 1
LINC00884-202ENST00000448892 EIF4G2P78344 907 aaKnown RBP eCLIP21.27■■□□□ 1
LINC00884-202ENST00000448892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.27■■□□□ 18e-19■■■■■ 229.3
LINC00884-202ENST00000448892 AQRO60306 1485 aaKnown RBP eCLIP21.27■■□□□ 1
LINC00884-202ENST00000448892 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
LINC00884-202ENST00000448892 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
LINC00884-202ENST00000448892 LAS1LQ9Y4W2 734 aaKnown RBP21.25■□□□□ 0.99
LINC00884-202ENST00000448892 IGF1RP08069 1367 aa21.25■□□□□ 0.99
LINC00884-202ENST00000448892 NPM2Q86SE8 214 aaKnown RBP21.24■□□□□ 0.99
LINC00884-202ENST00000448892 NEFMP07197 916 aa21.24■□□□□ 0.99
LINC00884-202ENST00000448892 HFM1A2PYH4 1435 aa21.23■□□□□ 0.99
LINC00884-202ENST00000448892 SMG6Q86US8 1419 aaKnown RBP21.23■□□□□ 0.99
LINC00884-202ENST00000448892 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
LINC00884-202ENST00000448892 RNF123Q5XPI4 1314 aa21.21■□□□□ 0.99
LINC00884-202ENST00000448892 FGD6Q6ZV73 1430 aa21.21■□□□□ 0.99
LINC00884-202ENST00000448892 CCDC7Q96M83 1385 aa21.21■□□□□ 0.99
LINC00884-202ENST00000448892 UBE2Q2Q8WVN8 375 aa21.2■□□□□ 0.98
LINC00884-202ENST00000448892 NUDCQ9Y266 331 aa21.2■□□□□ 0.98
LINC00884-202ENST00000448892 SENP3-EIF4A1A0A087X0R7 540 aa21.19■□□□□ 0.98
LINC00884-202ENST00000448892 NAIPQ13075 1403 aa21.18■□□□□ 0.98
LINC00884-202ENST00000448892 NCOA1Q15788 1441 aa21.18■□□□□ 0.98
LINC00884-202ENST00000448892 CARMIL1Q5VZK9 1371 aa21.17■□□□□ 0.98
LINC00884-202ENST00000448892 WASHC2CQ9Y4E1 1318 aa21.17■□□□□ 0.98
LINC00884-202ENST00000448892 USP35Q9P2H5 1018 aa21.15■□□□□ 0.98
LINC00884-202ENST00000448892 FHOD3Q2V2M9 1422 aa21.15■□□□□ 0.98
LINC00884-202ENST00000448892 CNGB1Q14028 1251 aaPredicted RBP21.13■□□□□ 0.97
LINC00884-202ENST00000448892 BRPF3Q9ULD4 1205 aa21.13■□□□□ 0.97
LINC00884-202ENST00000448892 FMN1Q68DA7 1419 aa21.1■□□□□ 0.97
LINC00884-202ENST00000448892 FYCO1Q9BQS8 1478 aa21.09■□□□□ 0.97
LINC00884-202ENST00000448892 L3MBTL2Q969R5 705 aa21.09■□□□□ 0.97
LINC00884-202ENST00000448892 KIF7Q2M1P5 1343 aa21.08■□□□□ 0.97
LINC00884-202ENST00000448892 DENND4BO75064 1496 aaPredicted RBP21.07■□□□□ 0.96
LINC00884-202ENST00000448892 PDE4AP27815 886 aa21.07■□□□□ 0.96
LINC00884-202ENST00000448892 CASKIN1Q8WXD9 1431 aa21.06■□□□□ 0.96
LINC00884-202ENST00000448892 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
LINC00884-202ENST00000448892 PPM1GO15355 546 aaPredicted RBP21.04■□□□□ 0.96
LINC00884-202ENST00000448892 EIF5BO60841 1220 aaKnown RBP21.04■□□□□ 0.96
LINC00884-202ENST00000448892 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
LINC00884-202ENST00000448892 TCERG1O14776 1098 aaKnown RBP21.02■□□□□ 0.96
LINC00884-202ENST00000448892 BACH2Q9BYV9 841 aa21.02■□□□□ 0.96
LINC00884-202ENST00000448892 MTUS2Q5JR59 1369 aa21.02■□□□□ 0.95
LINC00884-202ENST00000448892 NBPF8Q3BBV2 869 aa21.01■□□□□ 0.95
LINC00884-202ENST00000448892 FOXD1Q16676 465 aa21.01■□□□□ 0.95
LINC00884-202ENST00000448892 EXOC6Q8TAG9 804 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms