RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 EIF4G3O43432 1585 aaKnown RBP27.36■■□□□ 1.97
LMNA-208ENST00000448611 APLP2Q06481 763 aa27.34■■□□□ 1.97
LMNA-208ENST00000448611 GRIN2BQ13224 1484 aa27.31■■□□□ 1.96
LMNA-208ENST00000448611 FHAD1B1AJZ9 1412 aa27.28■■□□□ 1.96
LMNA-208ENST00000448611 ADAMTS12P58397 1594 aa27.28■■□□□ 1.96
LMNA-208ENST00000448611 EFCAB5A4FU69 1503 aa27.26■■□□□ 1.95
LMNA-208ENST00000448611 FHOD3Q2V2M9 1422 aa27.14■■□□□ 1.94
LMNA-208ENST00000448611 SNAPC4Q5SXM2 1469 aa27.13■■□□□ 1.93
LMNA-208ENST00000448611 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
LMNA-208ENST00000448611 P3H3Q8IVL6 736 aa27.13■■□□□ 1.93
LMNA-208ENST00000448611 SAMD9Q5K651 1589 aa27.13■■□□□ 1.93
LMNA-208ENST00000448611 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
LMNA-208ENST00000448611 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
LMNA-208ENST00000448611 PCF11O94913 1555 aaKnown RBP27.08■■□□□ 1.93
LMNA-208ENST00000448611 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
LMNA-208ENST00000448611 FBLN2P98095 1184 aa27.04■■□□□ 1.92
LMNA-208ENST00000448611 IQGAP2Q13576 1575 aa27.03■■□□□ 1.92
LMNA-208ENST00000448611 FMN1Q68DA7 1419 aa27.02■■□□□ 1.92
LMNA-208ENST00000448611 FYCO1Q9BQS8 1478 aa27.02■■□□□ 1.92
LMNA-208ENST00000448611 CASKIN1Q8WXD9 1431 aa27.02■■□□□ 1.92
LMNA-208ENST00000448611 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
LMNA-208ENST00000448611 GRIN2AQ12879 1464 aa26.99■■□□□ 1.91
LMNA-208ENST00000448611 SYNJ2O15056 1496 aa26.98■■□□□ 1.91
LMNA-208ENST00000448611 CFAP43Q8NDM7 1665 aa26.98■■□□□ 1.91
LMNA-208ENST00000448611 ZEB1P37275 1124 aaPredicted RBP26.96■■□□□ 1.91
LMNA-208ENST00000448611 LRRC9Q6ZRR7 1453 aa26.94■■□□□ 1.9
LMNA-208ENST00000448611 KIAA0586Q9BVV6 1533 aa26.93■■□□□ 1.9
LMNA-208ENST00000448611 UGGT2Q9NYU1 1516 aa26.91■■□□□ 1.9
LMNA-208ENST00000448611 RRBP1Q9P2E9 1410 aaKnown RBP26.9■■□□□ 1.9
LMNA-208ENST00000448611 CHD1O14646 1710 aa26.89■■□□□ 1.9
LMNA-208ENST00000448611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
LMNA-208ENST00000448611 ATP1B4Q9UN42 357 aaPredicted RBP26.85■■□□□ 1.89
LMNA-208ENST00000448611 HNRNPUL2Q1KMD3 747 aaKnown RBP26.84■■□□□ 1.89
LMNA-208ENST00000448611 CEP170Q5SW79 1584 aa26.83■■□□□ 1.88
LMNA-208ENST00000448611 CCER1Q8TC90 406 aaPredicted RBP26.79■■□□□ 1.88
LMNA-208ENST00000448611 NUP160Q12769 1436 aa26.79■■□□□ 1.88
LMNA-208ENST00000448611 DISP1Q96F81 1524 aa26.78■■□□□ 1.88
LMNA-208ENST00000448611 LRRIQ1Q96JM4 1722 aa26.78■■□□□ 1.88
LMNA-208ENST00000448611 CCNB3Q8WWL7 1395 aa26.78■■□□□ 1.88
LMNA-208ENST00000448611 KIAA0556O60303 1618 aa26.76■■□□□ 1.87
LMNA-208ENST00000448611 PHLDB1Q86UU1 1377 aa26.73■■□□□ 1.87
LMNA-208ENST00000448611 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
LMNA-208ENST00000448611 HECW1Q76N89 1606 aa26.7■■□□□ 1.86
LMNA-208ENST00000448611 CCDC18Q5T9S5 1454 aa26.67■■□□□ 1.86
LMNA-208ENST00000448611 MTUS2Q5JR59 1369 aa26.64■■□□□ 1.86
LMNA-208ENST00000448611 EPRSP07814 1512 aaKnown RBP26.61■■□□□ 1.85
LMNA-208ENST00000448611 EHBP1L1Q8N3D4 1523 aa26.6■■□□□ 1.85
LMNA-208ENST00000448611 JPH4Q96JJ6 628 aa26.59■■□□□ 1.85
LMNA-208ENST00000448611 MAGI3Q5TCQ9 1506 aa26.57■■□□□ 1.84
LMNA-208ENST00000448611 CLASP1Q7Z460 1538 aa26.56■■□□□ 1.84
LMNA-208ENST00000448611 CARMIL2Q6F5E8 1435 aa26.56■■□□□ 1.84
LMNA-208ENST00000448611 NCOA2Q15596 1464 aa26.54■■□□□ 1.84
LMNA-208ENST00000448611 RAPGEF6Q8TEU7 1601 aa26.53■■□□□ 1.84
LMNA-208ENST00000448611 SUPT6HQ7KZ85 1726 aaKnown RBP26.53■■□□□ 1.84
LMNA-208ENST00000448611 CDK13Q14004 1512 aaKnown RBP26.53■■□□□ 1.84
LMNA-208ENST00000448611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.52■■□□□ 1.84
LMNA-208ENST00000448611 ARHGEF11O15085 1522 aa26.51■■□□□ 1.83
LMNA-208ENST00000448611 NUP153P49790 1475 aaKnown RBP26.51■■□□□ 1.83
LMNA-208ENST00000448611 FGD6Q6ZV73 1430 aa26.5■■□□□ 1.83
LMNA-208ENST00000448611 ITGAEP38570 1179 aa26.48■■□□□ 1.83
LMNA-208ENST00000448611 FAM50AQ14320 339 aaKnown RBP26.47■■□□□ 1.83
LMNA-208ENST00000448611 MYOM3Q5VTT5 1437 aa26.46■■□□□ 1.83
LMNA-208ENST00000448611 PLB1Q6P1J6 1458 aa26.43■■□□□ 1.82
LMNA-208ENST00000448611 SHROOM2Q13796 1616 aa26.43■■□□□ 1.82
LMNA-208ENST00000448611 ARID3CA6NKF2 412 aa26.41■■□□□ 1.82
LMNA-208ENST00000448611 PRG4Q92954 1404 aaPredicted RBP26.41■■□□□ 1.82
LMNA-208ENST00000448611 DHX57Q6P158 1386 aaKnown RBP26.38■■□□□ 1.81
LMNA-208ENST00000448611 ABCA8O94911 1581 aa26.35■■□□□ 1.81
LMNA-208ENST00000448611 SETD5Q9C0A6 1442 aa26.33■■□□□ 1.81
LMNA-208ENST00000448611 RAB3GAP2Q9H2M9 1393 aa26.33■■□□□ 1.81
LMNA-208ENST00000448611 ERCC6L2Q5T890 1561 aa26.33■■□□□ 1.8
LMNA-208ENST00000448611 PTPN23Q9H3S7 1636 aa26.32■■□□□ 1.8
LMNA-208ENST00000448611 CLSPNQ9HAW4 1339 aa26.31■■□□□ 1.8
LMNA-208ENST00000448611 CDK11AQ9UQ88 783 aaPredicted RBP26.31■■□□□ 1.8
LMNA-208ENST00000448611 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
LMNA-208ENST00000448611 MIA2Q96PC5 1412 aa26.28■■□□□ 1.8
LMNA-208ENST00000448611 PTPRGP23470 1445 aa26.26■■□□□ 1.8
LMNA-208ENST00000448611 TROQ12816 1431 aaPredicted RBP26.26■■□□□ 1.8
LMNA-208ENST00000448611 PTPRKQ15262 1439 aa26.25■■□□□ 1.79
LMNA-208ENST00000448611 ATP10BO94823 1461 aa26.2■■□□□ 1.79
LMNA-208ENST00000448611 ADCY10Q96PN6 1610 aa26.2■■□□□ 1.78
LMNA-208ENST00000448611 RIMBP3CA6NJZ7 1639 aa26.18■■□□□ 1.78
LMNA-208ENST00000448611 RIMBP3BA6NNM3 1639 aa26.18■■□□□ 1.78
LMNA-208ENST00000448611 RIMBP3Q9UFD9 1639 aa26.18■■□□□ 1.78
LMNA-208ENST00000448611 HFM1A2PYH4 1435 aa26.16■■□□□ 1.78
LMNA-208ENST00000448611 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
LMNA-208ENST00000448611 KIF14Q15058 1648 aa26.13■■□□□ 1.77
LMNA-208ENST00000448611 UACAQ9BZF9 1416 aa26.13■■□□□ 1.77
LMNA-208ENST00000448611 MAPKBP1O60336 1514 aa26.1■■□□□ 1.77
LMNA-208ENST00000448611 PLEKHD1A6NEE1 506 aa26.1■■□□□ 1.77
LMNA-208ENST00000448611 NAIPQ13075 1403 aa26.09■■□□□ 1.77
LMNA-208ENST00000448611 GPATCH8Q9UKJ3 1502 aaKnown RBP26.08■■□□□ 1.76
LMNA-208ENST00000448611 ITSN2Q9NZM3 1697 aa26.08■■□□□ 1.76
LMNA-208ENST00000448611 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
LMNA-208ENST00000448611 AKNAQ7Z591 1439 aa26.05■■□□□ 1.76
LMNA-208ENST00000448611 ABCC10Q5T3U5 1492 aa26.04■■□□□ 1.76
LMNA-208ENST00000448611 ABCC2Q92887 1545 aa26.04■■□□□ 1.76
LMNA-208ENST00000448611 DNMT1P26358 1616 aaKnown RBP26.02■■□□□ 1.76
LMNA-208ENST00000448611 ZNF644Q9H582 1327 aaPredicted RBP26.02■■□□□ 1.76
LMNA-208ENST00000448611 DAPK1P53355 1430 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms