RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SCRIBQ14160 1630 aa14.71□□□□□ -0.05
LINC00342-202ENST00000448494 RBM10P98175 930 aaKnown RBP14.7□□□□□ -0.06
LINC00342-202ENST00000448494 PDIA4P13667 645 aaKnown RBP14.7□□□□□ -0.06
LINC00342-202ENST00000448494 CCER2I3L3R5 266 aa14.69□□□□□ -0.06
LINC00342-202ENST00000448494 NEFMP07197 916 aa14.68□□□□□ -0.06
LINC00342-202ENST00000448494 RRP9O43818 475 aaKnown RBP14.67□□□□□ -0.06
LINC00342-202ENST00000448494 A0A0U1RQG5 324 aaPredicted RBP14.65□□□□□ -0.06
LINC00342-202ENST00000448494 PPM1GO15355 546 aaPredicted RBP14.61□□□□□ -0.07
LINC00342-202ENST00000448494 GSE1Q14687 1217 aa14.61□□□□□ -0.07
LINC00342-202ENST00000448494 HSP90AA2PQ14568 343 aaPredicted RBP14.6□□□□□ -0.07
LINC00342-202ENST00000448494 EEA1Q15075 1411 aa14.6□□□□□ -0.07
LINC00342-202ENST00000448494 TRIM52Q96A61 297 aa14.6□□□□□ -0.07
LINC00342-202ENST00000448494 CEP162Q5TB80 1403 aa14.58□□□□□ -0.07
LINC00342-202ENST00000448494 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
LINC00342-202ENST00000448494 DHX57Q6P158 1386 aaKnown RBP14.56□□□□□ -0.08
LINC00342-202ENST00000448494 BCL11BQ9C0K0 894 aaPredicted RBP14.53□□□□□ -0.08
LINC00342-202ENST00000448494 IRX6P78412 446 aaPredicted RBP14.51□□□□□ -0.09
LINC00342-202ENST00000448494 HSP90AA1P07900 732 aaKnown RBP14.49□□□□□ -0.09
LINC00342-202ENST00000448494 TAF7LQ5H9L4 462 aa14.49□□□□□ -0.09
LINC00342-202ENST00000448494 TNIKQ9UKE5 1360 aa14.48□□□□□ -0.09
LINC00342-202ENST00000448494 ANP32CO43423 234 aa14.46□□□□□ -0.1
LINC00342-202ENST00000448494 PPP1R15AO75807 674 aaPredicted RBP14.46□□□□□ -0.1
LINC00342-202ENST00000448494 B4GALNT3Q6L9W6 998 aa14.46□□□□□ -0.1
LINC00342-202ENST00000448494 CUX2O14529 1486 aa14.45□□□□□ -0.1
LINC00342-202ENST00000448494 CENPJQ9HC77 1338 aaPredicted RBP14.44□□□□□ -0.1
LINC00342-202ENST00000448494 CALD1Q05682 793 aaKnown RBP14.44□□□□□ -0.1
LINC00342-202ENST00000448494 LAS1LQ9Y4W2 734 aaKnown RBP14.44□□□□□ -0.1
LINC00342-202ENST00000448494 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
LINC00342-202ENST00000448494 DDX10Q13206 875 aaKnown RBP14.43□□□□□ -0.1
LINC00342-202ENST00000448494 FRAT1Q92837 279 aaPredicted RBP14.43□□□□□ -0.1
LINC00342-202ENST00000448494 PRDM4Q9UKN5 801 aa14.4□□□□□ -0.1
LINC00342-202ENST00000448494 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
LINC00342-202ENST00000448494 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
LINC00342-202ENST00000448494 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.11
LINC00342-202ENST00000448494 NAP1L5Q96NT1 182 aaPredicted RBP14.36□□□□□ -0.11
LINC00342-202ENST00000448494 RRAGDQ9NQL2 400 aaPredicted RBP14.35□□□□□ -0.11
LINC00342-202ENST00000448494 NFKBIBQ15653 356 aa14.33□□□□□ -0.11
LINC00342-202ENST00000448494 DCAF11Q8TEB1 546 aa14.33□□□□□ -0.11
LINC00342-202ENST00000448494 PDCL3Q9H2J4 239 aa14.32□□□□□ -0.12
LINC00342-202ENST00000448494 PNNQ9H307 717 aaKnown RBP14.31□□□□□ -0.12
LINC00342-202ENST00000448494 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
LINC00342-202ENST00000448494 ZNF326Q5BKZ1 582 aaKnown RBP14.3□□□□□ -0.12
LINC00342-202ENST00000448494 KLHL34Q8N239 644 aa14.3□□□□□ -0.12
LINC00342-202ENST00000448494 DDRGK1Q96HY6 314 aa14.3□□□□□ -0.12
LINC00342-202ENST00000448494 ARXQ96QS3 562 aa14.29□□□□□ -0.12
LINC00342-202ENST00000448494 CLCN1P35523 988 aa14.29□□□□□ -0.12
LINC00342-202ENST00000448494 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
LINC00342-202ENST00000448494 NAP1L2Q9ULW6 460 aaPredicted RBP14.25□□□□□ -0.13
LINC00342-202ENST00000448494 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
LINC00342-202ENST00000448494 RGS3P49796 1198 aa14.24□□□□□ -0.13
LINC00342-202ENST00000448494 TCERG1O14776 1098 aaKnown RBP14.23□□□□□ -0.13
LINC00342-202ENST00000448494 NPM2Q86SE8 214 aaKnown RBP14.23□□□□□ -0.13
LINC00342-202ENST00000448494 L1TD1Q5T7N2 865 aaKnown RBP14.22□□□□□ -0.13
LINC00342-202ENST00000448494 BBXQ8WY36 941 aaPredicted RBP14.22□□□□□ -0.13
LINC00342-202ENST00000448494 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
LINC00342-202ENST00000448494 TPM2P07951 284 aa14.22□□□□□ -0.13
LINC00342-202ENST00000448494 IPO4Q8TEX9 1081 aaKnown RBP14.2□□□□□ -0.14
LINC00342-202ENST00000448494 MS4A1P11836 297 aa14.19□□□□□ -0.14
LINC00342-202ENST00000448494 GTF2E1P29083 439 aaPredicted RBP14.19□□□□□ -0.14
LINC00342-202ENST00000448494 NCLP19338 710 aaKnown RBP14.18□□□□□ -0.14
LINC00342-202ENST00000448494 AEBP2Q6ZN18 517 aaPredicted RBP14.18□□□□□ -0.14
LINC00342-202ENST00000448494 WDR97A6NE52 1622 aa14.18□□□□□ -0.14
LINC00342-202ENST00000448494 BACH2Q9BYV9 841 aa14.17□□□□□ -0.14
LINC00342-202ENST00000448494 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
LINC00342-202ENST00000448494 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
LINC00342-202ENST00000448494 PDE4AP27815 886 aa14.17□□□□□ -0.14
LINC00342-202ENST00000448494 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
LINC00342-202ENST00000448494 RNF123Q5XPI4 1314 aa14.16□□□□□ -0.14
LINC00342-202ENST00000448494 VPS8Q8N3P4 1428 aa14.15□□□□□ -0.14
LINC00342-202ENST00000448494 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
LINC00342-202ENST00000448494 STAC3Q96MF2 364 aa14.14□□□□□ -0.15
LINC00342-202ENST00000448494 SMAP1Q8IYB5 467 aaPredicted RBP14.14□□□□□ -0.15
LINC00342-202ENST00000448494 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
LINC00342-202ENST00000448494 MAPKBP1O60336 1514 aa14.13□□□□□ -0.15
LINC00342-202ENST00000448494 CNGB1Q14028 1251 aaPredicted RBP14.12□□□□□ -0.15
LINC00342-202ENST00000448494 MAP7D2Q96T17 732 aa14.11□□□□□ -0.15
LINC00342-202ENST00000448494 PAXIP1Q6ZW49 1069 aaPredicted RBP14.11□□□□□ -0.15
LINC00342-202ENST00000448494 CHMP4BQ9H444 224 aaKnown RBP14.11□□□□□ -0.15
LINC00342-202ENST00000448494 CLIP1P30622 1438 aa14.11□□□□□ -0.15
LINC00342-202ENST00000448494 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
LINC00342-202ENST00000448494 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
LINC00342-202ENST00000448494 NESP48681 1621 aa14.09□□□□□ -0.15
LINC00342-202ENST00000448494 HMGXB3Q12766 1538 aa14.09□□□□□ -0.15
LINC00342-202ENST00000448494 UBTFP17480 764 aaKnown RBP14.09□□□□□ -0.15
LINC00342-202ENST00000448494 SIN3AQ96ST3 1273 aa14.09□□□□□ -0.15
LINC00342-202ENST00000448494 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
LINC00342-202ENST00000448494 FRAT2O75474 233 aaPredicted RBP14.08□□□□□ -0.16
LINC00342-202ENST00000448494 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
LINC00342-202ENST00000448494 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
LINC00342-202ENST00000448494 ABCC8Q09428 1581 aa14.04□□□□□ -0.16
LINC00342-202ENST00000448494 BAZ1AQ9NRL2 1556 aaPredicted RBP14.04□□□□□ -0.16
LINC00342-202ENST00000448494 BRD2P25440 801 aaKnown RBP14.03□□□□□ -0.16
LINC00342-202ENST00000448494 SMARCA4P51532 1647 aa14.02□□□□□ -0.17
LINC00342-202ENST00000448494 AKNAQ7Z591 1439 aa14□□□□□ -0.17
LINC00342-202ENST00000448494 TERF1P54274 439 aa13.99□□□□□ -0.17
LINC00342-202ENST00000448494 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
LINC00342-202ENST00000448494 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
LINC00342-202ENST00000448494 FTSJ3Q8IY81 847 aaKnown RBP13.98□□□□□ -0.17
LINC00342-202ENST00000448494 SOGA1O94964 1423 aa13.98□□□□□ -0.17
LINC00342-202ENST00000448494 MTERF4Q7Z6M4 381 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms