RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
PRDM15-206ENST00000447016 CLIP1P30622 1438 aa17.53■□□□□ 0.4
PRDM15-206ENST00000447016 PPP4R2Q9NY27 417 aa17.51■□□□□ 0.39
PRDM15-206ENST00000447016 EEA1Q15075 1411 aa17.5■□□□□ 0.39
PRDM15-206ENST00000447016 KDM2AQ9Y2K7 1162 aa17.47■□□□□ 0.39
PRDM15-206ENST00000447016 SUPT16HQ9Y5B9 1047 aaKnown RBP17.45■□□□□ 0.38
PRDM15-206ENST00000447016 CDK11BP21127 795 aaKnown RBP17.45■□□□□ 0.38
PRDM15-206ENST00000447016 NOP58Q9Y2X3 529 aaKnown RBP17.45■□□□□ 0.38
PRDM15-206ENST00000447016 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
PRDM15-206ENST00000447016 PTMAP06454 111 aaKnown RBP17.43■□□□□ 0.38
PRDM15-206ENST00000447016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
PRDM15-206ENST00000447016 ZCCHC6Q5VYS8 1495 aaKnown RBP17.43■□□□□ 0.38
PRDM15-206ENST00000447016 HIRIP3Q9BW71 556 aaPredicted RBP17.43■□□□□ 0.38
PRDM15-206ENST00000447016 CDCA8Q53HL2 280 aa17.42■□□□□ 0.38
PRDM15-206ENST00000447016 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
PRDM15-206ENST00000447016 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
PRDM15-206ENST00000447016 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
PRDM15-206ENST00000447016 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
PRDM15-206ENST00000447016 GOLGA3Q08378 1498 aa17.38■□□□□ 0.37
PRDM15-206ENST00000447016 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
PRDM15-206ENST00000447016 DNTTIP2Q5QJE6 756 aaKnown RBP17.37■□□□□ 0.37
PRDM15-206ENST00000447016 NAP1L5Q96NT1 182 aaPredicted RBP17.37■□□□□ 0.37
PRDM15-206ENST00000447016 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
PRDM15-206ENST00000447016 ZRSR1Q15695 479 aaKnown RBP17.36■□□□□ 0.37
PRDM15-206ENST00000447016 CHMP4BQ9H444 224 aaKnown RBP17.33■□□□□ 0.36
PRDM15-206ENST00000447016 KNSTRNQ9Y448 316 aa17.32■□□□□ 0.36
PRDM15-206ENST00000447016 RRP7BPQ9NSQ0 103 aa17.32■□□□□ 0.36
PRDM15-206ENST00000447016 LAS1LQ9Y4W2 734 aaKnown RBP17.31■□□□□ 0.36
PRDM15-206ENST00000447016 FTSJ3Q8IY81 847 aaKnown RBP17.3■□□□□ 0.36
PRDM15-206ENST00000447016 MS4A1P11836 297 aa17.3■□□□□ 0.36
PRDM15-206ENST00000447016 L1TD1Q5T7N2 865 aaKnown RBP17.28■□□□□ 0.36
PRDM15-206ENST00000447016 TIMELESSQ9UNS1 1208 aa17.28■□□□□ 0.36
PRDM15-206ENST00000447016 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.36
PRDM15-206ENST00000447016 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
PRDM15-206ENST00000447016 MYO15BQ96JP2 1530 aa17.24■□□□□ 0.35
PRDM15-206ENST00000447016 CARD11Q9BXL7 1154 aa17.23■□□□□ 0.35
PRDM15-206ENST00000447016 RTN4Q9NQC3 1192 aaKnown RBP17.23■□□□□ 0.35
PRDM15-206ENST00000447016 NRDCO43847 1150 aa17.22■□□□□ 0.35
PRDM15-206ENST00000447016 RGS3P49796 1198 aa17.22■□□□□ 0.35
PRDM15-206ENST00000447016 GOLGA6L6A8MZA4 724 aa17.22■□□□□ 0.35
PRDM15-206ENST00000447016 DEKP35659 375 aaKnown RBP17.22■□□□□ 0.35
PRDM15-206ENST00000447016 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
PRDM15-206ENST00000447016 HSP90AB1P08238 724 aaKnown RBP17.2■□□□□ 0.34
PRDM15-206ENST00000447016 MAPK8IP3Q9UPT6 1336 aa17.19■□□□□ 0.34
PRDM15-206ENST00000447016 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
PRDM15-206ENST00000447016 RBM19Q9Y4C8 960 aaKnown RBP17.18■□□□□ 0.34
PRDM15-206ENST00000447016 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
PRDM15-206ENST00000447016 CFAP44Q96MT7 982 aa17.17■□□□□ 0.34
PRDM15-206ENST00000447016 CHAF1AQ13111 956 aaPredicted RBP17.17■□□□□ 0.34
PRDM15-206ENST00000447016 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
PRDM15-206ENST00000447016 HSCBQ8IWL3 235 aa17.16■□□□□ 0.34
PRDM15-206ENST00000447016 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
PRDM15-206ENST00000447016 MSNP26038 577 aaKnown RBP17.14■□□□□ 0.33
PRDM15-206ENST00000447016 PTMSP20962 102 aa17.12■□□□□ 0.33
PRDM15-206ENST00000447016 PLCB2Q00722 1185 aa17.12■□□□□ 0.33
PRDM15-206ENST00000447016 PNNQ9H307 717 aaKnown RBP17.12■□□□□ 0.33
PRDM15-206ENST00000447016 CHMP7Q8WUX9 453 aaPredicted RBP17.11■□□□□ 0.33
PRDM15-206ENST00000447016 FRAT1Q92837 279 aaPredicted RBP17.11■□□□□ 0.33
PRDM15-206ENST00000447016 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
PRDM15-206ENST00000447016 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
PRDM15-206ENST00000447016 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
PRDM15-206ENST00000447016 SIN3AQ96ST3 1273 aa17.09■□□□□ 0.33
PRDM15-206ENST00000447016 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
PRDM15-206ENST00000447016 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
PRDM15-206ENST00000447016 CCNB3Q8WWL7 1395 aa17.06■□□□□ 0.32
PRDM15-206ENST00000447016 GOLGA6L4A6NEF3 574 aa17.06■□□□□ 0.32
PRDM15-206ENST00000447016 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
PRDM15-206ENST00000447016 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
PRDM15-206ENST00000447016 MCCP23508 829 aa17.04■□□□□ 0.32
PRDM15-206ENST00000447016 TMF1P82094 1093 aa17.04■□□□□ 0.32
PRDM15-206ENST00000447016 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.32
PRDM15-206ENST00000447016 GBP4Q96PP9 640 aa17.02■□□□□ 0.32
PRDM15-206ENST00000447016 FGD1P98174 961 aa17.01■□□□□ 0.31
PRDM15-206ENST00000447016 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
PRDM15-206ENST00000447016 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
PRDM15-206ENST00000447016 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
PRDM15-206ENST00000447016 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
PRDM15-206ENST00000447016 KCNJ4P48050 445 aa16.99■□□□□ 0.31
PRDM15-206ENST00000447016 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
PRDM15-206ENST00000447016 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
PRDM15-206ENST00000447016 OS9Q13438 667 aaPredicted RBP16.96■□□□□ 0.31
PRDM15-206ENST00000447016 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
PRDM15-206ENST00000447016 TSHZ2Q9NRE2 1034 aa16.94■□□□□ 0.3
PRDM15-206ENST00000447016 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
PRDM15-206ENST00000447016 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
PRDM15-206ENST00000447016 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
PRDM15-206ENST00000447016 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
PRDM15-206ENST00000447016 POGKQ9P215 609 aa16.93■□□□□ 0.3
PRDM15-206ENST00000447016 ARID4BQ4LE39 1312 aaPredicted RBP16.93■□□□□ 0.3
PRDM15-206ENST00000447016 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
PRDM15-206ENST00000447016 RCAN3Q9UKA8 241 aa16.92■□□□□ 0.3
PRDM15-206ENST00000447016 DRC7Q8IY82 874 aa16.91■□□□□ 0.3
PRDM15-206ENST00000447016 KTN1Q86UP2 1357 aaKnown RBP16.91■□□□□ 0.3
PRDM15-206ENST00000447016 A0A0G2JS52 829 aa16.91■□□□□ 0.3
PRDM15-206ENST00000447016 SYAP1Q96A49 352 aaPredicted RBP16.91■□□□□ 0.3
PRDM15-206ENST00000447016 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
PRDM15-206ENST00000447016 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
PRDM15-206ENST00000447016 RALBP1Q15311 655 aa16.9■□□□□ 0.3
PRDM15-206ENST00000447016 USP35Q9P2H5 1018 aa16.89■□□□□ 0.29
PRDM15-206ENST00000447016 GOLGA6L3A6NEY3 463 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms