RNA–Protein interactions for RNA: ENST00000445506.6

MSR1-205, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 1,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-205ENST00000445506 MAP3K1Q13233 1512 aa19.3■□□□□ 0.68
MSR1-205ENST00000445506 IFT140Q96RY7 1462 aa19.3■□□□□ 0.68
MSR1-205ENST00000445506 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
MSR1-205ENST00000445506 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
MSR1-205ENST00000445506 PBRM1Q86U86 1689 aa19.25■□□□□ 0.67
MSR1-205ENST00000445506 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
MSR1-205ENST00000445506 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
MSR1-205ENST00000445506 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.66
MSR1-205ENST00000445506 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
MSR1-205ENST00000445506 SAMD9Q5K651 1589 aa19.14■□□□□ 0.65
MSR1-205ENST00000445506 TIAM1Q13009 1591 aa19.13■□□□□ 0.65
MSR1-205ENST00000445506 FMN1Q68DA7 1419 aa19.11■□□□□ 0.65
MSR1-205ENST00000445506 FYCO1Q9BQS8 1478 aa19.11■□□□□ 0.65
MSR1-205ENST00000445506 CASKIN1Q8WXD9 1431 aa19.09■□□□□ 0.65
MSR1-205ENST00000445506 CFAP43Q8NDM7 1665 aa19.09■□□□□ 0.65
MSR1-205ENST00000445506 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.64
MSR1-205ENST00000445506 TTBK1Q5TCY1 1321 aaPredicted RBP19.08■□□□□ 0.64
MSR1-205ENST00000445506 PCF11O94913 1555 aaKnown RBP19.05■□□□□ 0.64
MSR1-205ENST00000445506 EIF4G3O43432 1585 aaKnown RBP19.05■□□□□ 0.64
MSR1-205ENST00000445506 KANK4Q5T7N3 995 aaPredicted RBP19.05■□□□□ 0.64
MSR1-205ENST00000445506 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
MSR1-205ENST00000445506 IQGAP2Q13576 1575 aa19.03■□□□□ 0.64
MSR1-205ENST00000445506 FHOD3Q2V2M9 1422 aa19.03■□□□□ 0.64
MSR1-205ENST00000445506 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
MSR1-205ENST00000445506 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
MSR1-205ENST00000445506 OSCARQ8IYS5 282 aa19■□□□□ 0.63
MSR1-205ENST00000445506 UGGT2Q9NYU1 1516 aa18.99■□□□□ 0.63
MSR1-205ENST00000445506 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
MSR1-205ENST00000445506 SNAPC4Q5SXM2 1469 aa18.99■□□□□ 0.63
MSR1-205ENST00000445506 KIAA0586Q9BVV6 1533 aa18.97■□□□□ 0.63
MSR1-205ENST00000445506 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
MSR1-205ENST00000445506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
MSR1-205ENST00000445506 CCNB3Q8WWL7 1395 aa18.94■□□□□ 0.62
MSR1-205ENST00000445506 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
MSR1-205ENST00000445506 SYNJ2O15056 1496 aa18.93■□□□□ 0.62
MSR1-205ENST00000445506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.9■□□□□ 0.62
MSR1-205ENST00000445506 CCDC18Q5T9S5 1454 aa18.89■□□□□ 0.61
MSR1-205ENST00000445506 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
MSR1-205ENST00000445506 HECW1Q76N89 1606 aa18.86■□□□□ 0.61
MSR1-205ENST00000445506 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
MSR1-205ENST00000445506 NUP160Q12769 1436 aa18.83■□□□□ 0.6
MSR1-205ENST00000445506 KIAA0556O60303 1618 aa18.83■□□□□ 0.6
MSR1-205ENST00000445506 EHBP1L1Q8N3D4 1523 aa18.82■□□□□ 0.6
MSR1-205ENST00000445506 LRRIQ1Q96JM4 1722 aa18.81■□□□□ 0.6
MSR1-205ENST00000445506 PHLDB1Q86UU1 1377 aa18.81■□□□□ 0.6
MSR1-205ENST00000445506 DISP1Q96F81 1524 aa18.8■□□□□ 0.6
MSR1-205ENST00000445506 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
MSR1-205ENST00000445506 CEP170Q5SW79 1584 aa18.79■□□□□ 0.6
MSR1-205ENST00000445506 ATP1B4Q9UN42 357 aaPredicted RBP18.79■□□□□ 0.6
MSR1-205ENST00000445506 MTUS2Q5JR59 1369 aa18.78■□□□□ 0.6
MSR1-205ENST00000445506 SUPT6HQ7KZ85 1726 aaKnown RBP18.77■□□□□ 0.6
MSR1-205ENST00000445506 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
MSR1-205ENST00000445506 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
MSR1-205ENST00000445506 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
MSR1-205ENST00000445506 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
MSR1-205ENST00000445506 EPRSP07814 1512 aaKnown RBP18.74■□□□□ 0.59
MSR1-205ENST00000445506 CARMIL2Q6F5E8 1435 aa18.72■□□□□ 0.59
MSR1-205ENST00000445506 FGD6Q6ZV73 1430 aa18.71■□□□□ 0.59
MSR1-205ENST00000445506 NCOA2Q15596 1464 aa18.7■□□□□ 0.58
MSR1-205ENST00000445506 RAPGEF6Q8TEU7 1601 aa18.7■□□□□ 0.58
MSR1-205ENST00000445506 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
MSR1-205ENST00000445506 CHD1O14646 1710 aa18.68■□□□□ 0.58
MSR1-205ENST00000445506 DHX57Q6P158 1386 aaKnown RBP18.68■□□□□ 0.58
MSR1-205ENST00000445506 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
MSR1-205ENST00000445506 JPH4Q96JJ6 628 aa18.64■□□□□ 0.58
MSR1-205ENST00000445506 MAGI3Q5TCQ9 1506 aa18.64■□□□□ 0.57
MSR1-205ENST00000445506 MIA2Q96PC5 1412 aa18.63■□□□□ 0.57
MSR1-205ENST00000445506 NUP153P49790 1475 aaKnown RBP18.62■□□□□ 0.57
MSR1-205ENST00000445506 TCOF1Q13428 1488 aaKnown RBP18.62■□□□□ 0.57
MSR1-205ENST00000445506 FBLN2P98095 1184 aa18.62■□□□□ 0.57
MSR1-205ENST00000445506 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
MSR1-205ENST00000445506 CDK11AQ9UQ88 783 aaPredicted RBP18.61■□□□□ 0.57
MSR1-205ENST00000445506 RAB3GAP2Q9H2M9 1393 aa18.59■□□□□ 0.57
MSR1-205ENST00000445506 CDK13Q14004 1512 aaKnown RBP18.59■□□□□ 0.57
MSR1-205ENST00000445506 PTPN23Q9H3S7 1636 aa18.58■□□□□ 0.57
MSR1-205ENST00000445506 ABCA8O94911 1581 aa18.55■□□□□ 0.56
MSR1-205ENST00000445506 SHROOM2Q13796 1616 aa18.54■□□□□ 0.56
MSR1-205ENST00000445506 ITGAEP38570 1179 aa18.54■□□□□ 0.56
MSR1-205ENST00000445506 CYB5RLQ6IPT4 315 aa18.53■□□□□ 0.56
MSR1-205ENST00000445506 ADCY10Q96PN6 1610 aa18.53■□□□□ 0.56
MSR1-205ENST00000445506 HFM1A2PYH4 1435 aa18.52■□□□□ 0.56
MSR1-205ENST00000445506 TROQ12816 1431 aaPredicted RBP18.52■□□□□ 0.56
MSR1-205ENST00000445506 AKNAQ7Z591 1439 aa18.52■□□□□ 0.56
MSR1-205ENST00000445506 ACIN1Q9UKV3 1341 aaKnown RBP18.52■□□□□ 0.56
MSR1-205ENST00000445506 PLB1Q6P1J6 1458 aa18.49■□□□□ 0.55
MSR1-205ENST00000445506 PRG4Q92954 1404 aaPredicted RBP18.48■□□□□ 0.55
MSR1-205ENST00000445506 ITSN2Q9NZM3 1697 aa18.46■□□□□ 0.55
MSR1-205ENST00000445506 PTPRKQ15262 1439 aa18.45■□□□□ 0.54
MSR1-205ENST00000445506 MAPKBP1O60336 1514 aa18.44■□□□□ 0.54
MSR1-205ENST00000445506 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
MSR1-205ENST00000445506 PTPRGP23470 1445 aa18.43■□□□□ 0.54
MSR1-205ENST00000445506 ZNF316A6NFI3 1004 aaPredicted RBP18.43■□□□□ 0.54
MSR1-205ENST00000445506 CLASP1Q7Z460 1538 aa18.43■□□□□ 0.54
MSR1-205ENST00000445506 NAIPQ13075 1403 aa18.42■□□□□ 0.54
MSR1-205ENST00000445506 GCC2Q8IWJ2 1684 aa18.42■□□□□ 0.54
MSR1-205ENST00000445506 ATP10BO94823 1461 aa18.41■□□□□ 0.54
MSR1-205ENST00000445506 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
MSR1-205ENST00000445506 ROCK1Q13464 1354 aa18.4■□□□□ 0.54
MSR1-205ENST00000445506 DNMT1P26358 1616 aaKnown RBP18.39■□□□□ 0.54
MSR1-205ENST00000445506 PLEKHD1A6NEE1 506 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms