RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
RBM39-216ENST00000444878 EFCAB5A4FU69 1503 aa20.7■□□□□ 0.9
RBM39-216ENST00000444878 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
RBM39-216ENST00000444878 WDR62O43379 1518 aa20.67■□□□□ 0.9
RBM39-216ENST00000444878 P3H3Q8IVL6 736 aa20.67■□□□□ 0.9
RBM39-216ENST00000444878 MAP3K1Q13233 1512 aa20.65■□□□□ 0.9
RBM39-216ENST00000444878 TIAM1Q13009 1591 aa20.65■□□□□ 0.9
RBM39-216ENST00000444878 FHOD3Q2V2M9 1422 aa20.64■□□□□ 0.89
RBM39-216ENST00000444878 AQRO60306 1485 aaKnown RBP eCLIP20.63■□□□□ 0.892e-10■■■■□ 23
RBM39-216ENST00000444878 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
RBM39-216ENST00000444878 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
RBM39-216ENST00000444878 PCF11O94913 1555 aaKnown RBP20.61■□□□□ 0.89
RBM39-216ENST00000444878 GRIN2BQ13224 1484 aa20.58■□□□□ 0.89
RBM39-216ENST00000444878 RRBP1Q9P2E9 1410 aaKnown RBP20.58■□□□□ 0.88
RBM39-216ENST00000444878 CFAP43Q8NDM7 1665 aa20.58■□□□□ 0.88
RBM39-216ENST00000444878 ADAMTS12P58397 1594 aa20.57■□□□□ 0.88
RBM39-216ENST00000444878 FYCO1Q9BQS8 1478 aa20.56■□□□□ 0.88
RBM39-216ENST00000444878 SAMD9Q5K651 1589 aa20.56■□□□□ 0.88
RBM39-216ENST00000444878 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
RBM39-216ENST00000444878 LRRC9Q6ZRR7 1453 aa20.55■□□□□ 0.88
RBM39-216ENST00000444878 FMN1Q68DA7 1419 aa20.54■□□□□ 0.88
RBM39-216ENST00000444878 ZNF608Q9ULD9 1512 aaPredicted RBP20.54■□□□□ 0.88
RBM39-216ENST00000444878 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
RBM39-216ENST00000444878 THOC2Q8NI27 1593 aaKnown RBP20.53■□□□□ 0.88
RBM39-216ENST00000444878 CCNB3Q8WWL7 1395 aa20.51■□□□□ 0.87
RBM39-216ENST00000444878 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
RBM39-216ENST00000444878 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
RBM39-216ENST00000444878 SNAPC4Q5SXM2 1469 aa20.46■□□□□ 0.87
RBM39-216ENST00000444878 PHLDB1Q86UU1 1377 aa20.4■□□□□ 0.86
RBM39-216ENST00000444878 LRRIQ1Q96JM4 1722 aa20.39■□□□□ 0.85
RBM39-216ENST00000444878 ITGAEP38570 1179 aa20.36■□□□□ 0.85
RBM39-216ENST00000444878 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
RBM39-216ENST00000444878 MAGI1Q96QZ7 1491 aaPredicted RBP20.34■□□□□ 0.85
RBM39-216ENST00000444878 UGGT2Q9NYU1 1516 aa20.33■□□□□ 0.85
RBM39-216ENST00000444878 MTUS2Q5JR59 1369 aa20.32■□□□□ 0.84
RBM39-216ENST00000444878 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
RBM39-216ENST00000444878 FAM50AQ14320 339 aaKnown RBP20.3■□□□□ 0.84
RBM39-216ENST00000444878 DHX57Q6P158 1386 aaKnown RBP20.29■□□□□ 0.84
RBM39-216ENST00000444878 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
RBM39-216ENST00000444878 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
RBM39-216ENST00000444878 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.84
RBM39-216ENST00000444878 SYNJ2O15056 1496 aa20.27■□□□□ 0.84
RBM39-216ENST00000444878 CCDC18Q5T9S5 1454 aa20.27■□□□□ 0.84
RBM39-216ENST00000444878 SUPT6HQ7KZ85 1726 aaKnown RBP20.25■□□□□ 0.83
RBM39-216ENST00000444878 EHBP1L1Q8N3D4 1523 aa20.25■□□□□ 0.83
RBM39-216ENST00000444878 KIAA0556O60303 1618 aa20.24■□□□□ 0.83
RBM39-216ENST00000444878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.23■□□□□ 0.83
RBM39-216ENST00000444878 FBLN2P98095 1184 aa20.22■□□□□ 0.83
RBM39-216ENST00000444878 DISP1Q96F81 1524 aa20.22■□□□□ 0.83
RBM39-216ENST00000444878 FGD6Q6ZV73 1430 aa20.21■□□□□ 0.83
RBM39-216ENST00000444878 NCOA2Q15596 1464 aa20.21■□□□□ 0.83
RBM39-216ENST00000444878 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
RBM39-216ENST00000444878 RAB3GAP2Q9H2M9 1393 aa20.2■□□□□ 0.82
RBM39-216ENST00000444878 EPRSP07814 1512 aaKnown RBP20.2■□□□□ 0.82
RBM39-216ENST00000444878 SETD5Q9C0A6 1442 aa20.19■□□□□ 0.82
RBM39-216ENST00000444878 MAGI3Q5TCQ9 1506 aa20.17■□□□□ 0.82
RBM39-216ENST00000444878 MYOM3Q5VTT5 1437 aa20.16■□□□□ 0.82
RBM39-216ENST00000444878 NUP160Q12769 1436 aa20.14■□□□□ 0.82
RBM39-216ENST00000444878 CDK13Q14004 1512 aaKnown RBP20.14■□□□□ 0.81
RBM39-216ENST00000444878 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
RBM39-216ENST00000444878 RAPGEF6Q8TEU7 1601 aa20.12■□□□□ 0.81
RBM39-216ENST00000444878 ZNF316A6NFI3 1004 aaPredicted RBP20.11■□□□□ 0.81
RBM39-216ENST00000444878 ARID3CA6NKF2 412 aa20.1■□□□□ 0.81
RBM39-216ENST00000444878 PTPN23Q9H3S7 1636 aa20.08■□□□□ 0.81
RBM39-216ENST00000444878 JPH4Q96JJ6 628 aa20.08■□□□□ 0.81
RBM39-216ENST00000444878 CARMIL2Q6F5E8 1435 aa20.08■□□□□ 0.8
RBM39-216ENST00000444878 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.8
RBM39-216ENST00000444878 NUP153P49790 1475 aaKnown RBP20.07■□□□□ 0.8
RBM39-216ENST00000444878 MAPKBP1O60336 1514 aa20.03■□□□□ 0.8
RBM39-216ENST00000444878 CDK11AQ9UQ88 783 aaPredicted RBP20.01■□□□□ 0.79
RBM39-216ENST00000444878 PTPRKQ15262 1439 aa20.01■□□□□ 0.79
RBM39-216ENST00000444878 TCOF1Q13428 1488 aaKnown RBP20■□□□□ 0.79
RBM39-216ENST00000444878 PLB1Q6P1J6 1458 aa19.99■□□□□ 0.79
RBM39-216ENST00000444878 MIA2Q96PC5 1412 aa19.99■□□□□ 0.79
RBM39-216ENST00000444878 CHD1O14646 1710 aa19.98■□□□□ 0.79
RBM39-216ENST00000444878 HFM1A2PYH4 1435 aa19.98■□□□□ 0.79
RBM39-216ENST00000444878 NAIPQ13075 1403 aa19.93■□□□□ 0.78
RBM39-216ENST00000444878 TROQ12816 1431 aaPredicted RBP19.91■□□□□ 0.78
RBM39-216ENST00000444878 DAXXQ9UER7 740 aaPredicted RBP19.9■□□□□ 0.78
RBM39-216ENST00000444878 ABCA8O94911 1581 aa19.89■□□□□ 0.78
RBM39-216ENST00000444878 PRG4Q92954 1404 aaPredicted RBP19.89■□□□□ 0.77
RBM39-216ENST00000444878 GCC2Q8IWJ2 1684 aa19.88■□□□□ 0.77
RBM39-216ENST00000444878 UACAQ9BZF9 1416 aa19.87■□□□□ 0.77
RBM39-216ENST00000444878 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
RBM39-216ENST00000444878 ADCY10Q96PN6 1610 aa19.86■□□□□ 0.77
RBM39-216ENST00000444878 SIN3AQ96ST3 1273 aa19.85■□□□□ 0.77
RBM39-216ENST00000444878 RRP7BPQ9NSQ0 103 aa19.85■□□□□ 0.77
RBM39-216ENST00000444878 ITSN2Q9NZM3 1697 aa19.85■□□□□ 0.77
RBM39-216ENST00000444878 AKNAQ7Z591 1439 aa19.85■□□□□ 0.77
RBM39-216ENST00000444878 NEUROD1Q13562 356 aa19.84■□□□□ 0.77
RBM39-216ENST00000444878 KIF14Q15058 1648 aa19.83■□□□□ 0.76
RBM39-216ENST00000444878 PTPRGP23470 1445 aa19.83■□□□□ 0.76
RBM39-216ENST00000444878 DNMT1P26358 1616 aaKnown RBP19.82■□□□□ 0.76
RBM39-216ENST00000444878 SHROOM2Q13796 1616 aa19.81■□□□□ 0.76
RBM39-216ENST00000444878 ATP10BO94823 1461 aa19.81■□□□□ 0.76
RBM39-216ENST00000444878 PLEKHD1A6NEE1 506 aa19.81■□□□□ 0.76
RBM39-216ENST00000444878 DAPK1P53355 1430 aa19.8■□□□□ 0.76
RBM39-216ENST00000444878 TIMELESSQ9UNS1 1208 aa19.8■□□□□ 0.76
RBM39-216ENST00000444878 PLPPR3Q6T4P5 718 aa19.79■□□□□ 0.76
RBM39-216ENST00000444878 ZNF644Q9H582 1327 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms