RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
LINC00475-208ENST00000444476 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
LINC00475-208ENST00000444476 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
LINC00475-208ENST00000444476 CREBZFQ9NS37 354 aa20.53■□□□□ 0.88
LINC00475-208ENST00000444476 HMGXB3Q12766 1538 aa20.51■□□□□ 0.87
LINC00475-208ENST00000444476 MROH2BQ7Z745 1585 aa20.5■□□□□ 0.87
LINC00475-208ENST00000444476 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
LINC00475-208ENST00000444476 ZRANB1Q9UGI0 708 aa20.4■□□□□ 0.86
LINC00475-208ENST00000444476 ZNF579Q8NAF0 562 aaKnown RBP20.39■□□□□ 0.85
LINC00475-208ENST00000444476 LHX8Q68G74 356 aa20.36■□□□□ 0.85
LINC00475-208ENST00000444476 PAK3O75914 559 aaPredicted RBP20.33■□□□□ 0.85
LINC00475-208ENST00000444476 NPM1P06748 294 aaKnown RBP eCLIP20.32■□□□□ 0.84
LINC00475-208ENST00000444476 DCBLD2Q96PD2 775 aa20.3■□□□□ 0.84
LINC00475-208ENST00000444476 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
LINC00475-208ENST00000444476 WIZO95785 1651 aa20.26■□□□□ 0.83
LINC00475-208ENST00000444476 POTEIP0CG38 1075 aa20.25■□□□□ 0.83
LINC00475-208ENST00000444476 PROM2Q8N271 834 aa20.16■□□□□ 0.82
LINC00475-208ENST00000444476 MNX1P50219 401 aaPredicted RBP20.13■□□□□ 0.81
LINC00475-208ENST00000444476 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
LINC00475-208ENST00000444476 GALR2O43603 387 aaPredicted RBP20.07■□□□□ 0.8
LINC00475-208ENST00000444476 LAMC3Q9Y6N6 1575 aa20.06■□□□□ 0.8
LINC00475-208ENST00000444476 PHF12Q96QT6 1004 aa20.02■□□□□ 0.8
LINC00475-208ENST00000444476 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
LINC00475-208ENST00000444476 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
LINC00475-208ENST00000444476 NESP48681 1621 aa19.98■□□□□ 0.79
LINC00475-208ENST00000444476 PLEKHG5O94827 1062 aa19.97■□□□□ 0.79
LINC00475-208ENST00000444476 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
LINC00475-208ENST00000444476 CFTRP13569 1480 aa19.86■□□□□ 0.77
LINC00475-208ENST00000444476 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
LINC00475-208ENST00000444476 CUX2O14529 1486 aa19.83■□□□□ 0.76
LINC00475-208ENST00000444476 MIER1Q8N108 512 aa19.81■□□□□ 0.76
LINC00475-208ENST00000444476 TSPYL2Q9H2G4 693 aaPredicted RBP19.81■□□□□ 0.76
LINC00475-208ENST00000444476 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
LINC00475-208ENST00000444476 MS4A3Q96HJ5 214 aa19.77■□□□□ 0.76
LINC00475-208ENST00000444476 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
LINC00475-208ENST00000444476 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
LINC00475-208ENST00000444476 FANCD2Q9BXW9 1451 aa19.73■□□□□ 0.75
LINC00475-208ENST00000444476 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
LINC00475-208ENST00000444476 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
LINC00475-208ENST00000444476 CCDC61Q9Y6R9 512 aa19.72■□□□□ 0.75
LINC00475-208ENST00000444476 ASTLQ6HA08 431 aaPredicted RBP19.71■□□□□ 0.75
LINC00475-208ENST00000444476 MRC2Q9UBG0 1479 aa19.69■□□□□ 0.74
LINC00475-208ENST00000444476 PLCD3Q8N3E9 789 aa19.66■□□□□ 0.74
LINC00475-208ENST00000444476 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
LINC00475-208ENST00000444476 ATMINO43313 823 aaPredicted RBP19.64■□□□□ 0.73
LINC00475-208ENST00000444476 SLC39A7Q92504 469 aa19.64■□□□□ 0.73
LINC00475-208ENST00000444476 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
LINC00475-208ENST00000444476 WDR62O43379 1518 aa19.63■□□□□ 0.73
LINC00475-208ENST00000444476 C7P10643 843 aa19.62■□□□□ 0.73
LINC00475-208ENST00000444476 KIF12Q96FN5 646 aa19.61■□□□□ 0.73
LINC00475-208ENST00000444476 METRNQ9UJH8 293 aa19.6■□□□□ 0.73
LINC00475-208ENST00000444476 OTUD5Q96G74 571 aa19.58■□□□□ 0.72
LINC00475-208ENST00000444476 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
LINC00475-208ENST00000444476 POTEB2H3BUK9 544 aa19.57■□□□□ 0.72
LINC00475-208ENST00000444476 RASEFQ8IZ41 740 aa19.55■□□□□ 0.72
LINC00475-208ENST00000444476 FKBP8Q14318 412 aa19.52■□□□□ 0.72
LINC00475-208ENST00000444476 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
LINC00475-208ENST00000444476 URB2Q14146 1524 aaKnown RBP19.5■□□□□ 0.71
LINC00475-208ENST00000444476 MAP3K13O43283 966 aa19.48■□□□□ 0.71
LINC00475-208ENST00000444476 ATN1P54259 1190 aaPredicted RBP19.46■□□□□ 0.71
LINC00475-208ENST00000444476 MAMSTRQ6ZN01 415 aa19.45■□□□□ 0.7
LINC00475-208ENST00000444476 TIE1P35590 1138 aa19.44■□□□□ 0.7
LINC00475-208ENST00000444476 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
LINC00475-208ENST00000444476 DNMBPQ6XZF7 1577 aa19.41■□□□□ 0.7
LINC00475-208ENST00000444476 SGIP1Q9BQI5 828 aa19.41■□□□□ 0.7
LINC00475-208ENST00000444476 BMP2KQ9NSY1 1161 aaPredicted RBP19.41■□□□□ 0.7
LINC00475-208ENST00000444476 NUBP1P53384 320 aa19.36■□□□□ 0.69
LINC00475-208ENST00000444476 FAM212AQ96EL1 285 aa19.35■□□□□ 0.69
LINC00475-208ENST00000444476 TRPC6Q9Y210 931 aa19.33■□□□□ 0.68
LINC00475-208ENST00000444476 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
LINC00475-208ENST00000444476 FBXO3Q9UK99 471 aa19.32■□□□□ 0.68
LINC00475-208ENST00000444476 PCDHB13Q9Y5F0 798 aa19.32■□□□□ 0.68
LINC00475-208ENST00000444476 SCUBE2Q9NQ36 999 aa19.3■□□□□ 0.68
LINC00475-208ENST00000444476 TTLL13PA6NNM8 815 aa19.27■□□□□ 0.68
LINC00475-208ENST00000444476 POTEJP0CG39 1038 aa19.26■□□□□ 0.67
LINC00475-208ENST00000444476 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
LINC00475-208ENST00000444476 CUX1P39880 1505 aa19.24■□□□□ 0.67
LINC00475-208ENST00000444476 SEC24BO95487 1268 aa19.22■□□□□ 0.67
LINC00475-208ENST00000444476 TARBP1Q13395 1621 aaKnown RBP19.19■□□□□ 0.66
LINC00475-208ENST00000444476 IER5LQ5T953 404 aa19.19■□□□□ 0.66
LINC00475-208ENST00000444476 FGD5Q6ZNL6 1462 aa19.19■□□□□ 0.66
LINC00475-208ENST00000444476 SOGA1O94964 1423 aa19.17■□□□□ 0.66
LINC00475-208ENST00000444476 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
LINC00475-208ENST00000444476 WDR97A6NE52 1622 aa19.16■□□□□ 0.66
LINC00475-208ENST00000444476 POTEFA5A3E0 1075 aa19.16■□□□□ 0.66
LINC00475-208ENST00000444476 POTEMA6NI47 508 aa19.16■□□□□ 0.66
LINC00475-208ENST00000444476 TRIM35Q9UPQ4 493 aa19.16■□□□□ 0.66
LINC00475-208ENST00000444476 IFNL1Q8IU54 200 aa19.15■□□□□ 0.66
LINC00475-208ENST00000444476 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
LINC00475-208ENST00000444476 PLSCR2Q9NRY7 297 aa19.13■□□□□ 0.65
LINC00475-208ENST00000444476 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
LINC00475-208ENST00000444476 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
LINC00475-208ENST00000444476 DCAF8Q5TAQ9 597 aa19.12■□□□□ 0.65
LINC00475-208ENST00000444476 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
LINC00475-208ENST00000444476 POTEGQ6S5H5 508 aa19.11■□□□□ 0.65
LINC00475-208ENST00000444476 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
LINC00475-208ENST00000444476 COLQQ9Y215 455 aaPredicted RBP19.08■□□□□ 0.64
LINC00475-208ENST00000444476 TMEM106CQ9BVX2 250 aa19.07■□□□□ 0.64
LINC00475-208ENST00000444476 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
LINC00475-208ENST00000444476 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms