RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 RUSC2Q8N2Y8 1516 aa37.06■■■■□ 3.52
POLR2J3-202ENST00000443430 FAM69CQ0P6D2 419 aa36.99■■■■□ 3.51
POLR2J3-202ENST00000443430 ABCC10Q5T3U5 1492 aa36.99■■■■□ 3.51
POLR2J3-202ENST00000443430 NPM1P06748 294 aaKnown RBP eCLIP36.96■■■■□ 3.51
POLR2J3-202ENST00000443430 MAPKBP1O60336 1514 aa36.93■■■■□ 3.5
POLR2J3-202ENST00000443430 ADCY10Q96PN6 1610 aa36.89■■■■□ 3.5
POLR2J3-202ENST00000443430 DIP2BQ9P265 1576 aa36.86■■■■□ 3.49
POLR2J3-202ENST00000443430 KIAA0586Q9BVV6 1533 aa36.85■■■■□ 3.49
POLR2J3-202ENST00000443430 IGF1RP08069 1367 aa36.82■■■■□ 3.49
POLR2J3-202ENST00000443430 KIF27Q86VH2 1401 aa36.73■■■■□ 3.47
POLR2J3-202ENST00000443430 CUL7Q14999 1698 aa36.72■■■■□ 3.47
POLR2J3-202ENST00000443430 KDM6BO15054 1643 aa36.67■■■■□ 3.46
POLR2J3-202ENST00000443430 TSPOAP1O95153 1857 aa36.66■■■■□ 3.46
POLR2J3-202ENST00000443430 PTPRGP23470 1445 aa36.61■■■■□ 3.45
POLR2J3-202ENST00000443430 KDM4FA0A1W2PPD8 638 aa36.59■■■■□ 3.45
POLR2J3-202ENST00000443430 CARMIL1Q5VZK9 1371 aa36.55■■■■□ 3.44
POLR2J3-202ENST00000443430 TTBK1Q5TCY1 1321 aaPredicted RBP36.52■■■■□ 3.44
POLR2J3-202ENST00000443430 TNIKQ9UKE5 1360 aa36.5■■■■□ 3.43
POLR2J3-202ENST00000443430 CARMIL2Q6F5E8 1435 aa36.48■■■■□ 3.43
POLR2J3-202ENST00000443430 ABCC2Q92887 1545 aa36.47■■■■□ 3.43
POLR2J3-202ENST00000443430 ASXL2Q76L83 1435 aa36.41■■■■□ 3.42
POLR2J3-202ENST00000443430 IQGAP2Q13576 1575 aa36.4■■■■□ 3.42
POLR2J3-202ENST00000443430 PLB1Q6P1J6 1458 aa36.38■■■■□ 3.41
POLR2J3-202ENST00000443430 GLI2P10070 1586 aa36.36■■■■□ 3.41
POLR2J3-202ENST00000443430 UHRF1BP1LA0JNW5 1464 aa36.36■■■■□ 3.41
POLR2J3-202ENST00000443430 PPRC1Q5VV67 1664 aaKnown RBP36.35■■■■□ 3.41
POLR2J3-202ENST00000443430 UACAQ9BZF9 1416 aa36.31■■■■□ 3.4
POLR2J3-202ENST00000443430 DISP1Q96F81 1524 aa36.29■■■■□ 3.4
POLR2J3-202ENST00000443430 KDM5BQ9UGL1 1544 aa36.2■■■■□ 3.39
POLR2J3-202ENST00000443430 EPRSP07814 1512 aaKnown RBP36.18■■■■□ 3.38
POLR2J3-202ENST00000443430 COL17A1Q9UMD9 1497 aaPredicted RBP36.18■■■■□ 3.38
POLR2J3-202ENST00000443430 UGGT2Q9NYU1 1516 aa36.17■■■■□ 3.38
POLR2J3-202ENST00000443430 RAPGEF2Q9Y4G8 1499 aa36.14■■■■□ 3.38
POLR2J3-202ENST00000443430 MAP3K4Q9Y6R4 1608 aa36.14■■■■□ 3.38
POLR2J3-202ENST00000443430 ADGRL1O94910 1474 aa36.12■■■■□ 3.37
POLR2J3-202ENST00000443430 ZCCHC11Q5TAX3 1644 aaKnown RBP36.11■■■■□ 3.37
POLR2J3-202ENST00000443430 KIAA0556O60303 1618 aa36.08■■■■□ 3.37
POLR2J3-202ENST00000443430 TEX14Q8IWB6 1497 aa36.05■■■■□ 3.36
POLR2J3-202ENST00000443430 ILDR1Q86SU0 546 aaPredicted RBP35.97■■■■□ 3.35
POLR2J3-202ENST00000443430 WDR7Q9Y4E6 1490 aa35.95■■■■□ 3.35
POLR2J3-202ENST00000443430 CTTNBP2Q8WZ74 1663 aa35.85■■■■□ 3.33
POLR2J3-202ENST00000443430 CD109Q6YHK3 1445 aa35.81■■■■□ 3.32
POLR2J3-202ENST00000443430 ABCA8O94911 1581 aa35.81■■■■□ 3.32
POLR2J3-202ENST00000443430 GOLGA3Q08378 1498 aa35.8■■■■□ 3.32
POLR2J3-202ENST00000443430 MAGI3Q5TCQ9 1506 aa35.8■■■■□ 3.32
POLR2J3-202ENST00000443430 HECW2Q9P2P5 1572 aa35.79■■■■□ 3.32
POLR2J3-202ENST00000443430 CFAP43Q8NDM7 1665 aa35.78■■■■□ 3.32
POLR2J3-202ENST00000443430 KCNH8Q96L42 1107 aa35.78■■■■□ 3.32
POLR2J3-202ENST00000443430 PRXQ9BXM0 1461 aa35.66■■■■□ 3.3
POLR2J3-202ENST00000443430 KIF21BO75037 1637 aa35.55■■■■□ 3.28
POLR2J3-202ENST00000443430 ARAP3Q8WWN8 1544 aa35.54■■■■□ 3.28
POLR2J3-202ENST00000443430 ARID3CA6NKF2 412 aa35.53■■■■□ 3.28
POLR2J3-202ENST00000443430 ATP10BO94823 1461 aa35.52■■■■□ 3.28
POLR2J3-202ENST00000443430 P3H3Q8IVL6 736 aa35.5■■■■□ 3.27
POLR2J3-202ENST00000443430 FAM9AQ8IZU1 332 aaPredicted RBP35.47■■■■□ 3.27
POLR2J3-202ENST00000443430 ABCA9Q8IUA7 1624 aa35.42■■■■□ 3.26
POLR2J3-202ENST00000443430 PHLDB1Q86UU1 1377 aa35.4■■■■□ 3.26
POLR2J3-202ENST00000443430 SAMD9Q5K651 1589 aa35.34■■■■□ 3.25
POLR2J3-202ENST00000443430 RAPGEF3O95398 923 aa35.33■■■■□ 3.25
POLR2J3-202ENST00000443430 ADAMTSL3P82987 1691 aa35.32■■■■□ 3.24
POLR2J3-202ENST00000443430 RAPGEF6Q8TEU7 1601 aa35.3■■■■□ 3.24
POLR2J3-202ENST00000443430 PTPRMP28827 1452 aa35.29■■■■□ 3.24
POLR2J3-202ENST00000443430 NEO1Q92859 1461 aa35.29■■■■□ 3.24
POLR2J3-202ENST00000443430 CSRNP3Q8WYN3 585 aa35.27■■■■□ 3.24
POLR2J3-202ENST00000443430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.24■■■■□ 3.23
POLR2J3-202ENST00000443430 HNRNPUL2Q1KMD3 747 aaKnown RBP35.24■■■■□ 3.23
POLR2J3-202ENST00000443430 FRMPD1Q5SYB0 1578 aa35.21■■■■□ 3.23
POLR2J3-202ENST00000443430 NUP153P49790 1475 aaKnown RBP35.19■■■■□ 3.22
POLR2J3-202ENST00000443430 BCORL1Q5H9F3 1711 aa35.18■■■■□ 3.22
POLR2J3-202ENST00000443430 FBXO41Q8TF61 875 aa35.15■■■■□ 3.22
POLR2J3-202ENST00000443430 ARID4BQ4LE39 1312 aaPredicted RBP35.13■■■■□ 3.21
POLR2J3-202ENST00000443430 MADDQ8WXG6 1647 aa35.12■■■■□ 3.21
POLR2J3-202ENST00000443430 FHOD3Q2V2M9 1422 aa35.09■■■■□ 3.21
POLR2J3-202ENST00000443430 RANGAP1P46060 587 aaPredicted RBP35.08■■■■□ 3.21
POLR2J3-202ENST00000443430 PLEKHD1A6NEE1 506 aa35.06■■■■□ 3.2
POLR2J3-202ENST00000443430 PCF11O94913 1555 aaKnown RBP35.04■■■■□ 3.2
POLR2J3-202ENST00000443430 DENND4BO75064 1496 aaPredicted RBP35.04■■■■□ 3.2
POLR2J3-202ENST00000443430 ARHGEF40Q8TER5 1519 aa35.03■■■■□ 3.2
POLR2J3-202ENST00000443430 RICTORQ6R327 1708 aa35.03■■■■□ 3.2
POLR2J3-202ENST00000443430 AKNAQ7Z591 1439 aa35.02■■■■□ 3.2
POLR2J3-202ENST00000443430 LMTK3Q96Q04 1460 aa35.02■■■■□ 3.2
POLR2J3-202ENST00000443430 FANCAO15360 1455 aa34.98■■■■□ 3.19
POLR2J3-202ENST00000443430 EEA1Q15075 1411 aa34.98■■■■□ 3.19
POLR2J3-202ENST00000443430 RIMS1Q86UR5 1692 aaKnown RBP34.97■■■■□ 3.19
POLR2J3-202ENST00000443430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.96■■■■□ 3.19
POLR2J3-202ENST00000443430 CFAP74Q9C0B2 1584 aa34.93■■■■□ 3.18
POLR2J3-202ENST00000443430 TTC37Q6PGP7 1564 aa34.9■■■■□ 3.18
POLR2J3-202ENST00000443430 ZMYM4Q5VZL5 1548 aa34.89■■■■□ 3.18
POLR2J3-202ENST00000443430 EFCAB5A4FU69 1503 aa34.86■■■■□ 3.17
POLR2J3-202ENST00000443430 YEATS2Q9ULM3 1422 aa34.86■■■■□ 3.17
POLR2J3-202ENST00000443430 POGZQ7Z3K3 1410 aa34.85■■■■□ 3.17
POLR2J3-202ENST00000443430 SIGLEC1Q9BZZ2 1709 aa34.85■■■■□ 3.17
POLR2J3-202ENST00000443430 ZFYVE16Q7Z3T8 1539 aa34.84■■■■□ 3.17
POLR2J3-202ENST00000443430 HSPA2P54652 639 aa34.83■■■■□ 3.17
POLR2J3-202ENST00000443430 PLPPR3Q6T4P5 718 aa34.81■■■■□ 3.16
POLR2J3-202ENST00000443430 MAGI2Q86UL8 1455 aa34.81■■■■□ 3.16
POLR2J3-202ENST00000443430 CDK13Q14004 1512 aaKnown RBP34.79■■■■□ 3.16
POLR2J3-202ENST00000443430 HECW1Q76N89 1606 aa34.77■■■■□ 3.16
POLR2J3-202ENST00000443430 PLCH2O75038 1416 aa34.75■■■■□ 3.15
POLR2J3-202ENST00000443430 SCAPERQ9BY12 1400 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms