RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 NPM1P06748 294 aaKnown RBP eCLIP19.38■□□□□ 0.69
GACAT3-202ENST00000442387 KIF13AQ9H1H9 1805 aa19.35■□□□□ 0.69
GACAT3-202ENST00000442387 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
GACAT3-202ENST00000442387 IGF1RP08069 1367 aa19.34■□□□□ 0.69
GACAT3-202ENST00000442387 KIAA0586Q9BVV6 1533 aa19.34■□□□□ 0.69
GACAT3-202ENST00000442387 FAM69CQ0P6D2 419 aa19.33■□□□□ 0.68
GACAT3-202ENST00000442387 ABCC10Q5T3U5 1492 aa19.33■□□□□ 0.68
GACAT3-202ENST00000442387 MAPKBP1O60336 1514 aa19.31■□□□□ 0.68
GACAT3-202ENST00000442387 CUL7Q14999 1698 aa19.29■□□□□ 0.68
GACAT3-202ENST00000442387 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
GACAT3-202ENST00000442387 DIP2BQ9P265 1576 aa19.25■□□□□ 0.67
GACAT3-202ENST00000442387 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
GACAT3-202ENST00000442387 PTPRGP23470 1445 aa19.2■□□□□ 0.66
GACAT3-202ENST00000442387 CARMIL2Q6F5E8 1435 aa19.17■□□□□ 0.66
GACAT3-202ENST00000442387 TTBK1Q5TCY1 1321 aaPredicted RBP19.16■□□□□ 0.66
GACAT3-202ENST00000442387 TNIKQ9UKE5 1360 aa19.15■□□□□ 0.66
GACAT3-202ENST00000442387 KDM6BO15054 1643 aa19.14■□□□□ 0.65
GACAT3-202ENST00000442387 IQGAP2Q13576 1575 aa19.11■□□□□ 0.65
GACAT3-202ENST00000442387 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
GACAT3-202ENST00000442387 ASXL2Q76L83 1435 aa19.07■□□□□ 0.64
GACAT3-202ENST00000442387 UHRF1BP1LA0JNW5 1464 aa19.06■□□□□ 0.64
GACAT3-202ENST00000442387 PLB1Q6P1J6 1458 aa19.06■□□□□ 0.64
GACAT3-202ENST00000442387 TSPOAP1O95153 1857 aa19.05■□□□□ 0.64
GACAT3-202ENST00000442387 UACAQ9BZF9 1416 aa19.05■□□□□ 0.64
GACAT3-202ENST00000442387 DISP1Q96F81 1524 aa19.04■□□□□ 0.64
GACAT3-202ENST00000442387 KDM4FA0A1W2PPD8 638 aa19.03■□□□□ 0.64
GACAT3-202ENST00000442387 RAPGEF2Q9Y4G8 1499 aa19.03■□□□□ 0.64
GACAT3-202ENST00000442387 GLI2P10070 1586 aa19.02■□□□□ 0.63
GACAT3-202ENST00000442387 UGGT2Q9NYU1 1516 aa18.99■□□□□ 0.63
GACAT3-202ENST00000442387 KDM5BQ9UGL1 1544 aa18.97■□□□□ 0.63
GACAT3-202ENST00000442387 PPRC1Q5VV67 1664 aaKnown RBP18.95■□□□□ 0.62
GACAT3-202ENST00000442387 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
GACAT3-202ENST00000442387 KIAA0556O60303 1618 aa18.94■□□□□ 0.62
GACAT3-202ENST00000442387 ZCCHC11Q5TAX3 1644 aaKnown RBP18.9■□□□□ 0.62
GACAT3-202ENST00000442387 TEX14Q8IWB6 1497 aa18.9■□□□□ 0.62
GACAT3-202ENST00000442387 MAP3K4Q9Y6R4 1608 aa18.89■□□□□ 0.61
GACAT3-202ENST00000442387 COL17A1Q9UMD9 1497 aaPredicted RBP18.88■□□□□ 0.61
GACAT3-202ENST00000442387 WDR7Q9Y4E6 1490 aa18.85■□□□□ 0.61
GACAT3-202ENST00000442387 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
GACAT3-202ENST00000442387 GOLGA3Q08378 1498 aa18.84■□□□□ 0.61
GACAT3-202ENST00000442387 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
GACAT3-202ENST00000442387 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
GACAT3-202ENST00000442387 ABCA8O94911 1581 aa18.77■□□□□ 0.6
GACAT3-202ENST00000442387 CD109Q6YHK3 1445 aa18.76■□□□□ 0.59
GACAT3-202ENST00000442387 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
GACAT3-202ENST00000442387 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
GACAT3-202ENST00000442387 CFAP43Q8NDM7 1665 aa18.72■□□□□ 0.59
GACAT3-202ENST00000442387 FAM9AQ8IZU1 332 aaPredicted RBP18.71■□□□□ 0.59
GACAT3-202ENST00000442387 P3H3Q8IVL6 736 aa18.66■□□□□ 0.58
GACAT3-202ENST00000442387 ARID3CA6NKF2 412 aa18.65■□□□□ 0.58
GACAT3-202ENST00000442387 ATP10BO94823 1461 aa18.64■□□□□ 0.57
GACAT3-202ENST00000442387 ILDR1Q86SU0 546 aaPredicted RBP18.62■□□□□ 0.57
GACAT3-202ENST00000442387 HECW2Q9P2P5 1572 aa18.62■□□□□ 0.57
GACAT3-202ENST00000442387 ARAP3Q8WWN8 1544 aa18.6■□□□□ 0.57
GACAT3-202ENST00000442387 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
GACAT3-202ENST00000442387 SAMD9Q5K651 1589 aa18.58■□□□□ 0.56
GACAT3-202ENST00000442387 PHLDB1Q86UU1 1377 aa18.56■□□□□ 0.56
GACAT3-202ENST00000442387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
GACAT3-202ENST00000442387 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
GACAT3-202ENST00000442387 KIF21BO75037 1637 aa18.55■□□□□ 0.56
GACAT3-202ENST00000442387 ABCA9Q8IUA7 1624 aa18.55■□□□□ 0.56
GACAT3-202ENST00000442387 RAPGEF6Q8TEU7 1601 aa18.54■□□□□ 0.56
GACAT3-202ENST00000442387 NEO1Q92859 1461 aa18.51■□□□□ 0.55
GACAT3-202ENST00000442387 EEA1Q15075 1411 aa18.49■□□□□ 0.55
GACAT3-202ENST00000442387 RAPGEF3O95398 923 aa18.49■□□□□ 0.55
GACAT3-202ENST00000442387 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
GACAT3-202ENST00000442387 NUP153P49790 1475 aaKnown RBP18.49■□□□□ 0.55
GACAT3-202ENST00000442387 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
GACAT3-202ENST00000442387 PLEKHD1A6NEE1 506 aa18.43■□□□□ 0.54
GACAT3-202ENST00000442387 PTPRMP28827 1452 aa18.43■□□□□ 0.54
GACAT3-202ENST00000442387 ADAMTSL3P82987 1691 aa18.41■□□□□ 0.54
GACAT3-202ENST00000442387 FRMPD1Q5SYB0 1578 aa18.41■□□□□ 0.54
GACAT3-202ENST00000442387 ARID4BQ4LE39 1312 aaPredicted RBP18.4■□□□□ 0.54
GACAT3-202ENST00000442387 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
GACAT3-202ENST00000442387 EFCAB5A4FU69 1503 aa18.38■□□□□ 0.53
GACAT3-202ENST00000442387 AKNAQ7Z591 1439 aa18.37■□□□□ 0.53
GACAT3-202ENST00000442387 FANCAO15360 1455 aa18.36■□□□□ 0.53
GACAT3-202ENST00000442387 BCORL1Q5H9F3 1711 aa18.36■□□□□ 0.53
GACAT3-202ENST00000442387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.34■□□□□ 0.53
GACAT3-202ENST00000442387 ARHGEF40Q8TER5 1519 aa18.34■□□□□ 0.53
GACAT3-202ENST00000442387 MADDQ8WXG6 1647 aa18.34■□□□□ 0.53
GACAT3-202ENST00000442387 CFAP74Q9C0B2 1584 aa18.34■□□□□ 0.53
GACAT3-202ENST00000442387 TTC37Q6PGP7 1564 aa18.3■□□□□ 0.52
GACAT3-202ENST00000442387 RICTORQ6R327 1708 aa18.3■□□□□ 0.52
GACAT3-202ENST00000442387 PCF11O94913 1555 aaKnown RBP18.29■□□□□ 0.52
GACAT3-202ENST00000442387 CDK13Q14004 1512 aaKnown RBP18.28■□□□□ 0.52
GACAT3-202ENST00000442387 FBXO41Q8TF61 875 aa18.28■□□□□ 0.52
GACAT3-202ENST00000442387 POGZQ7Z3K3 1410 aa18.28■□□□□ 0.52
GACAT3-202ENST00000442387 ZMYM4Q5VZL5 1548 aa18.28■□□□□ 0.52
GACAT3-202ENST00000442387 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.51
GACAT3-202ENST00000442387 LMTK3Q96Q04 1460 aa18.26■□□□□ 0.51
GACAT3-202ENST00000442387 PLCH2O75038 1416 aa18.25■□□□□ 0.51
GACAT3-202ENST00000442387 YEATS2Q9ULM3 1422 aa18.25■□□□□ 0.51
GACAT3-202ENST00000442387 MAGI2Q86UL8 1455 aa18.25■□□□□ 0.51
GACAT3-202ENST00000442387 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
GACAT3-202ENST00000442387 UBTFP17480 764 aaKnown RBP18.24■□□□□ 0.51
GACAT3-202ENST00000442387 ATP1B4Q9UN42 357 aaPredicted RBP18.24■□□□□ 0.51
GACAT3-202ENST00000442387 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
GACAT3-202ENST00000442387 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
GACAT3-202ENST00000442387 SCAPERQ9BY12 1400 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms