RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 ADAMTS12P58397 1594 aa29.36■■■□□ 2.29
POLR1E-203ENST00000442009 PPARGC1BQ86YN6 1023 aaKnown RBP29.3■■■□□ 2.28
POLR1E-203ENST00000442009 EFCAB5A4FU69 1503 aa29.21■■■□□ 2.27
POLR1E-203ENST00000442009 SNAPC4Q5SXM2 1469 aa29.2■■■□□ 2.27
POLR1E-203ENST00000442009 MAGI1Q96QZ7 1491 aaPredicted RBP29.18■■■□□ 2.26
POLR1E-203ENST00000442009 SAMD9Q5K651 1589 aa29.11■■■□□ 2.25
POLR1E-203ENST00000442009 GRIN2AQ12879 1464 aa29.09■■■□□ 2.25
POLR1E-203ENST00000442009 SYNJ2O15056 1496 aa29.07■■■□□ 2.24
POLR1E-203ENST00000442009 APLP2Q06481 763 aa29.06■■■□□ 2.24
POLR1E-203ENST00000442009 IQGAP2Q13576 1575 aa29.05■■■□□ 2.24
POLR1E-203ENST00000442009 FHOD3Q2V2M9 1422 aa29.04■■■□□ 2.24
POLR1E-203ENST00000442009 P3H3Q8IVL6 736 aa29.01■■■□□ 2.23
POLR1E-203ENST00000442009 KIAA0586Q9BVV6 1533 aa29■■■□□ 2.23
POLR1E-203ENST00000442009 MAP3K1Q13233 1512 aa28.99■■■□□ 2.23
POLR1E-203ENST00000442009 TTBK1Q5TCY1 1321 aaPredicted RBP28.97■■■□□ 2.23
POLR1E-203ENST00000442009 UGGT2Q9NYU1 1516 aa28.95■■■□□ 2.23
POLR1E-203ENST00000442009 CHMP7Q8WUX9 453 aaPredicted RBP28.94■■■□□ 2.22
POLR1E-203ENST00000442009 PCF11O94913 1555 aaKnown RBP28.93■■■□□ 2.22
POLR1E-203ENST00000442009 FMN1Q68DA7 1419 aa28.93■■■□□ 2.22
POLR1E-203ENST00000442009 CASKIN1Q8WXD9 1431 aa28.92■■■□□ 2.22
POLR1E-203ENST00000442009 KANK4Q5T7N3 995 aaPredicted RBP28.92■■■□□ 2.22
POLR1E-203ENST00000442009 CEP170Q5SW79 1584 aa28.91■■■□□ 2.22
POLR1E-203ENST00000442009 FYCO1Q9BQS8 1478 aa28.9■■■□□ 2.22
POLR1E-203ENST00000442009 NUP160Q12769 1436 aa28.9■■■□□ 2.22
POLR1E-203ENST00000442009 TIAM1Q13009 1591 aa28.89■■■□□ 2.22
POLR1E-203ENST00000442009 CFAP43Q8NDM7 1665 aa28.82■■■□□ 2.2
POLR1E-203ENST00000442009 DISP1Q96F81 1524 aa28.8■■■□□ 2.2
POLR1E-203ENST00000442009 FBLN2P98095 1184 aa28.8■■■□□ 2.2
POLR1E-203ENST00000442009 HRCP23327 699 aa28.78■■■□□ 2.2
POLR1E-203ENST00000442009 LRRC9Q6ZRR7 1453 aa28.76■■■□□ 2.2
POLR1E-203ENST00000442009 KIAA0556O60303 1618 aa28.76■■■□□ 2.19
POLR1E-203ENST00000442009 LRRIQ1Q96JM4 1722 aa28.72■■■□□ 2.19
POLR1E-203ENST00000442009 CHD1O14646 1710 aa28.71■■■□□ 2.19
POLR1E-203ENST00000442009 JPH4Q96JJ6 628 aa28.66■■■□□ 2.18
POLR1E-203ENST00000442009 ATP1B4Q9UN42 357 aaPredicted RBP28.65■■■□□ 2.18
POLR1E-203ENST00000442009 RRBP1Q9P2E9 1410 aaKnown RBP28.65■■■□□ 2.18
POLR1E-203ENST00000442009 HECW1Q76N89 1606 aa28.6■■■□□ 2.17
POLR1E-203ENST00000442009 CARMIL2Q6F5E8 1435 aa28.57■■■□□ 2.16
POLR1E-203ENST00000442009 CCDC18Q5T9S5 1454 aa28.56■■■□□ 2.16
POLR1E-203ENST00000442009 EPRSP07814 1512 aaKnown RBP28.53■■■□□ 2.16
POLR1E-203ENST00000442009 PHLDB1Q86UU1 1377 aa28.51■■■□□ 2.15
POLR1E-203ENST00000442009 SHROOM2Q13796 1616 aa28.5■■■□□ 2.15
POLR1E-203ENST00000442009 CCNB3Q8WWL7 1395 aa28.5■■■□□ 2.15
POLR1E-203ENST00000442009 RAPGEF6Q8TEU7 1601 aa28.49■■■□□ 2.15
POLR1E-203ENST00000442009 MTUS2Q5JR59 1369 aa28.46■■■□□ 2.15
POLR1E-203ENST00000442009 MAGI3Q5TCQ9 1506 aa28.46■■■□□ 2.15
POLR1E-203ENST00000442009 NUP153P49790 1475 aaKnown RBP28.46■■■□□ 2.15
POLR1E-203ENST00000442009 EHBP1L1Q8N3D4 1523 aa28.45■■■□□ 2.14
POLR1E-203ENST00000442009 PRG4Q92954 1404 aaPredicted RBP28.44■■■□□ 2.14
POLR1E-203ENST00000442009 HNRNPUL2Q1KMD3 747 aaKnown RBP28.43■■■□□ 2.14
POLR1E-203ENST00000442009 CDK13Q14004 1512 aaKnown RBP28.42■■■□□ 2.14
POLR1E-203ENST00000442009 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
POLR1E-203ENST00000442009 PLB1Q6P1J6 1458 aa28.39■■■□□ 2.14
POLR1E-203ENST00000442009 ARHGEF11O15085 1522 aa28.39■■■□□ 2.13
POLR1E-203ENST00000442009 SUPT6HQ7KZ85 1726 aaKnown RBP28.38■■■□□ 2.13
POLR1E-203ENST00000442009 ABCA8O94911 1581 aa28.37■■■□□ 2.13
POLR1E-203ENST00000442009 NCOA2Q15596 1464 aa28.37■■■□□ 2.13
POLR1E-203ENST00000442009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.35■■■□□ 2.13
POLR1E-203ENST00000442009 ZEB1P37275 1124 aaPredicted RBP28.34■■■□□ 2.13
POLR1E-203ENST00000442009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.34■■■□□ 2.13
POLR1E-203ENST00000442009 FGD6Q6ZV73 1430 aa28.29■■■□□ 2.12
POLR1E-203ENST00000442009 PTPRGP23470 1445 aa28.29■■■□□ 2.12
POLR1E-203ENST00000442009 MYOM3Q5VTT5 1437 aa28.27■■■□□ 2.12
POLR1E-203ENST00000442009 ERCC6L2Q5T890 1561 aa28.26■■■□□ 2.11
POLR1E-203ENST00000442009 ARID3CA6NKF2 412 aa28.25■■■□□ 2.11
POLR1E-203ENST00000442009 CCER1Q8TC90 406 aaPredicted RBP28.24■■■□□ 2.11
POLR1E-203ENST00000442009 CDK11AQ9UQ88 783 aaPredicted RBP28.2■■■□□ 2.11
POLR1E-203ENST00000442009 ATP10BO94823 1461 aa28.19■■■□□ 2.1
POLR1E-203ENST00000442009 TROQ12816 1431 aaPredicted RBP28.17■■■□□ 2.1
POLR1E-203ENST00000442009 FAM50AQ14320 339 aaKnown RBP28.17■■■□□ 2.1
POLR1E-203ENST00000442009 UACAQ9BZF9 1416 aa28.14■■■□□ 2.1
POLR1E-203ENST00000442009 ADCY10Q96PN6 1610 aa28.13■■■□□ 2.09
POLR1E-203ENST00000442009 TCOF1Q13428 1488 aaKnown RBP28.12■■■□□ 2.09
POLR1E-203ENST00000442009 MIA2Q96PC5 1412 aa28.12■■■□□ 2.09
POLR1E-203ENST00000442009 PTPN23Q9H3S7 1636 aa28.12■■■□□ 2.09
POLR1E-203ENST00000442009 ITGAEP38570 1179 aa28.11■■■□□ 2.09
POLR1E-203ENST00000442009 ABCC2Q92887 1545 aa28.05■■■□□ 2.08
POLR1E-203ENST00000442009 KIF14Q15058 1648 aa28.03■■■□□ 2.08
POLR1E-203ENST00000442009 PLEKHD1A6NEE1 506 aa28.02■■■□□ 2.08
POLR1E-203ENST00000442009 PTPRKQ15262 1439 aa28.02■■■□□ 2.08
POLR1E-203ENST00000442009 OSCARQ8IYS5 282 aa28.02■■■□□ 2.08
POLR1E-203ENST00000442009 SETD5Q9C0A6 1442 aa28.01■■■□□ 2.07
POLR1E-203ENST00000442009 UHRF1BP1LA0JNW5 1464 aa28.01■■■□□ 2.07
POLR1E-203ENST00000442009 RAB3GAP2Q9H2M9 1393 aa27.98■■■□□ 2.07
POLR1E-203ENST00000442009 DHX57Q6P158 1386 aaKnown RBP27.97■■■□□ 2.07
POLR1E-203ENST00000442009 GPATCH8Q9UKJ3 1502 aaKnown RBP27.97■■■□□ 2.07
POLR1E-203ENST00000442009 ABCC10Q5T3U5 1492 aa27.97■■■□□ 2.07
POLR1E-203ENST00000442009 ITSN2Q9NZM3 1697 aa27.95■■■□□ 2.06
POLR1E-203ENST00000442009 KDM5BQ9UGL1 1544 aa27.91■■■□□ 2.06
POLR1E-203ENST00000442009 CLSPNQ9HAW4 1339 aa27.91■■■□□ 2.06
POLR1E-203ENST00000442009 HFM1A2PYH4 1435 aa27.89■■■□□ 2.06
POLR1E-203ENST00000442009 CDC42BPAQ5VT25 1732 aa27.88■■■□□ 2.05
POLR1E-203ENST00000442009 ZCCHC11Q5TAX3 1644 aaKnown RBP27.85■■■□□ 2.05
POLR1E-203ENST00000442009 ZNF644Q9H582 1327 aaPredicted RBP27.84■■■□□ 2.05
POLR1E-203ENST00000442009 DNMT1P26358 1616 aaKnown RBP27.84■■■□□ 2.05
POLR1E-203ENST00000442009 NAIPQ13075 1403 aa27.84■■■□□ 2.05
POLR1E-203ENST00000442009 CFDP1Q9UEE9 299 aaPredicted RBP27.83■■■□□ 2.05
POLR1E-203ENST00000442009 AKNAQ7Z591 1439 aa27.82■■■□□ 2.04
POLR1E-203ENST00000442009 CAMSAP2Q08AD1 1489 aa27.81■■■□□ 2.04
POLR1E-203ENST00000442009 ABCC5O15440 1437 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms