RNA–Protein interactions for RNA: ENST00000441570.1

LINC00472-205, long intergenic non-protein coding RNA 472, humanhuman

TSL 5

Gene LINC00472, Length 475 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-205ENST00000441570 EFCAB5A4FU69 1503 aa28.27■■■□□ 2.12
LINC00472-205ENST00000441570 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
LINC00472-205ENST00000441570 RANGAP1P46060 587 aaPredicted RBP28.15■■■□□ 2.1
LINC00472-205ENST00000441570 SYNJ2O15056 1496 aa28.13■■■□□ 2.09
LINC00472-205ENST00000441570 GRIN2AQ12879 1464 aa28.12■■■□□ 2.09
LINC00472-205ENST00000441570 SAMD9Q5K651 1589 aa28.11■■■□□ 2.09
LINC00472-205ENST00000441570 PCGF6Q9BYE7 350 aa28.1■■■□□ 2.09
LINC00472-205ENST00000441570 IQGAP2Q13576 1575 aa28.09■■■□□ 2.09
LINC00472-205ENST00000441570 APLP2Q06481 763 aa28.07■■■□□ 2.08
LINC00472-205ENST00000441570 KIAA0586Q9BVV6 1533 aa28.02■■■□□ 2.08
LINC00472-205ENST00000441570 MAP3K1Q13233 1512 aa28■■■□□ 2.07
LINC00472-205ENST00000441570 UGGT2Q9NYU1 1516 aa27.99■■■□□ 2.07
LINC00472-205ENST00000441570 FMN1Q68DA7 1419 aa27.97■■■□□ 2.07
LINC00472-205ENST00000441570 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
LINC00472-205ENST00000441570 FHOD3Q2V2M9 1422 aa27.93■■■□□ 2.06
LINC00472-205ENST00000441570 NUP160Q12769 1436 aa27.92■■■□□ 2.06
LINC00472-205ENST00000441570 FYCO1Q9BQS8 1478 aa27.92■■■□□ 2.06
LINC00472-205ENST00000441570 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
LINC00472-205ENST00000441570 PPARGC1BQ86YN6 1023 aaKnown RBP27.89■■■□□ 2.06
LINC00472-205ENST00000441570 CASKIN1Q8WXD9 1431 aa27.89■■■□□ 2.06
LINC00472-205ENST00000441570 PCF11O94913 1555 aaKnown RBP27.89■■■□□ 2.05
LINC00472-205ENST00000441570 TIAM1Q13009 1591 aa27.86■■■□□ 2.05
LINC00472-205ENST00000441570 CFAP43Q8NDM7 1665 aa27.84■■■□□ 2.05
LINC00472-205ENST00000441570 P3H3Q8IVL6 736 aa27.82■■■□□ 2.04
LINC00472-205ENST00000441570 KIAA0556O60303 1618 aa27.8■■■□□ 2.04
LINC00472-205ENST00000441570 CHD1O14646 1710 aa27.78■■■□□ 2.04
LINC00472-205ENST00000441570 FBLN2P98095 1184 aa27.77■■■□□ 2.04
LINC00472-205ENST00000441570 DISP1Q96F81 1524 aa27.75■■■□□ 2.03
LINC00472-205ENST00000441570 LRRC9Q6ZRR7 1453 aa27.7■■■□□ 2.02
LINC00472-205ENST00000441570 CARMIL2Q6F5E8 1435 aa27.69■■■□□ 2.02
LINC00472-205ENST00000441570 HECW1Q76N89 1606 aa27.69■■■□□ 2.02
LINC00472-205ENST00000441570 CCDC18Q5T9S5 1454 aa27.66■■■□□ 2.02
LINC00472-205ENST00000441570 KANK4Q5T7N3 995 aaPredicted RBP27.66■■■□□ 2.02
LINC00472-205ENST00000441570 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
LINC00472-205ENST00000441570 JPH4Q96JJ6 628 aa27.63■■■□□ 2.01
LINC00472-205ENST00000441570 LRRIQ1Q96JM4 1722 aa27.61■■■□□ 2.01
LINC00472-205ENST00000441570 SHROOM2Q13796 1616 aa27.59■■■□□ 2.01
LINC00472-205ENST00000441570 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
LINC00472-205ENST00000441570 RRBP1Q9P2E9 1410 aaKnown RBP27.55■■■□□ 2
LINC00472-205ENST00000441570 RAPGEF6Q8TEU7 1601 aa27.55■■■□□ 2
LINC00472-205ENST00000441570 EHBP1L1Q8N3D4 1523 aa27.51■■■□□ 2
LINC00472-205ENST00000441570 EPRSP07814 1512 aaKnown RBP27.51■■□□□ 1.99
LINC00472-205ENST00000441570 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
LINC00472-205ENST00000441570 PRG4Q92954 1404 aaPredicted RBP27.46■■□□□ 1.99
LINC00472-205ENST00000441570 MTUS2Q5JR59 1369 aa27.46■■□□□ 1.99
LINC00472-205ENST00000441570 SUPT6HQ7KZ85 1726 aaKnown RBP27.44■■□□□ 1.98
LINC00472-205ENST00000441570 HRCP23327 699 aa27.43■■□□□ 1.98
LINC00472-205ENST00000441570 NUP153P49790 1475 aaKnown RBP27.41■■□□□ 1.98
LINC00472-205ENST00000441570 CCNB3Q8WWL7 1395 aa27.41■■□□□ 1.98
LINC00472-205ENST00000441570 ABCA8O94911 1581 aa27.4■■□□□ 1.98
LINC00472-205ENST00000441570 CDK13Q14004 1512 aaKnown RBP27.35■■□□□ 1.97
LINC00472-205ENST00000441570 PHLDB1Q86UU1 1377 aa27.35■■□□□ 1.97
LINC00472-205ENST00000441570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.35■■□□□ 1.97
LINC00472-205ENST00000441570 ARHGEF11O15085 1522 aa27.34■■□□□ 1.97
LINC00472-205ENST00000441570 PLB1Q6P1J6 1458 aa27.33■■□□□ 1.97
LINC00472-205ENST00000441570 MAGI3Q5TCQ9 1506 aa27.32■■□□□ 1.96
LINC00472-205ENST00000441570 PTPRGP23470 1445 aa27.32■■□□□ 1.96
LINC00472-205ENST00000441570 NCOA2Q15596 1464 aa27.32■■□□□ 1.96
LINC00472-205ENST00000441570 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
LINC00472-205ENST00000441570 ZEB1P37275 1124 aaPredicted RBP27.27■■□□□ 1.96
LINC00472-205ENST00000441570 MYOM3Q5VTT5 1437 aa27.24■■□□□ 1.95
LINC00472-205ENST00000441570 FGD6Q6ZV73 1430 aa27.24■■□□□ 1.95
LINC00472-205ENST00000441570 HNRNPUL2Q1KMD3 747 aaKnown RBP27.22■■□□□ 1.95
LINC00472-205ENST00000441570 ADCY10Q96PN6 1610 aa27.22■■□□□ 1.95
LINC00472-205ENST00000441570 TROQ12816 1431 aaPredicted RBP27.2■■□□□ 1.94
LINC00472-205ENST00000441570 UACAQ9BZF9 1416 aa27.2■■□□□ 1.94
LINC00472-205ENST00000441570 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
LINC00472-205ENST00000441570 MIA2Q96PC5 1412 aa27.16■■□□□ 1.94
LINC00472-205ENST00000441570 ATP10BO94823 1461 aa27.16■■□□□ 1.94
LINC00472-205ENST00000441570 ABCC2Q92887 1545 aa27.16■■□□□ 1.94
LINC00472-205ENST00000441570 UHRF1BP1LA0JNW5 1464 aa27.13■■□□□ 1.93
LINC00472-205ENST00000441570 PTPN23Q9H3S7 1636 aa27.12■■□□□ 1.93
LINC00472-205ENST00000441570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.12■■□□□ 1.93
LINC00472-205ENST00000441570 OSCARQ8IYS5 282 aa27.12■■□□□ 1.93
LINC00472-205ENST00000441570 TCOF1Q13428 1488 aaKnown RBP27.12■■□□□ 1.93
LINC00472-205ENST00000441570 ITSN2Q9NZM3 1697 aa27.09■■□□□ 1.93
LINC00472-205ENST00000441570 FAM50AQ14320 339 aaKnown RBP27.08■■□□□ 1.93
LINC00472-205ENST00000441570 ARID3CA6NKF2 412 aa27.07■■□□□ 1.92
LINC00472-205ENST00000441570 KIF14Q15058 1648 aa27.06■■□□□ 1.92
LINC00472-205ENST00000441570 CCER1Q8TC90 406 aaPredicted RBP27.06■■□□□ 1.92
LINC00472-205ENST00000441570 PLEKHD1A6NEE1 506 aa27.05■■□□□ 1.92
LINC00472-205ENST00000441570 KDM5BQ9UGL1 1544 aa26.97■■□□□ 1.91
LINC00472-205ENST00000441570 ABCC10Q5T3U5 1492 aa26.95■■□□□ 1.91
LINC00472-205ENST00000441570 SETD5Q9C0A6 1442 aa26.95■■□□□ 1.9
LINC00472-205ENST00000441570 ITGAEP38570 1179 aa26.94■■□□□ 1.9
LINC00472-205ENST00000441570 ZCCHC11Q5TAX3 1644 aaKnown RBP26.94■■□□□ 1.9
LINC00472-205ENST00000441570 GPATCH8Q9UKJ3 1502 aaKnown RBP26.93■■□□□ 1.9
LINC00472-205ENST00000441570 CLSPNQ9HAW4 1339 aa26.9■■□□□ 1.9
LINC00472-205ENST00000441570 CDC42BPAQ5VT25 1732 aa26.9■■□□□ 1.9
LINC00472-205ENST00000441570 AKNAQ7Z591 1439 aa26.88■■□□□ 1.89
LINC00472-205ENST00000441570 DNMT1P26358 1616 aaKnown RBP26.87■■□□□ 1.89
LINC00472-205ENST00000441570 RAB3GAP2Q9H2M9 1393 aa26.85■■□□□ 1.89
LINC00472-205ENST00000441570 HFM1A2PYH4 1435 aa26.84■■□□□ 1.89
LINC00472-205ENST00000441570 PREX2Q70Z35 1606 aa26.83■■□□□ 1.88
LINC00472-205ENST00000441570 PTPRKQ15262 1439 aa26.82■■□□□ 1.88
LINC00472-205ENST00000441570 CFDP1Q9UEE9 299 aaPredicted RBP26.82■■□□□ 1.88
LINC00472-205ENST00000441570 CAMSAP2Q08AD1 1489 aa26.81■■□□□ 1.88
LINC00472-205ENST00000441570 GCC2Q8IWJ2 1684 aa26.8■■□□□ 1.88
LINC00472-205ENST00000441570 DHX57Q6P158 1386 aaKnown RBP26.8■■□□□ 1.88
LINC00472-205ENST00000441570 DAPK1P53355 1430 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms