RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
TMEM39B-203ENST00000441402 TRIM26Q12899 539 aaPredicted RBP26.62■■□□□ 1.85
TMEM39B-203ENST00000441402 EFCAB5A4FU69 1503 aa26.58■■□□□ 1.85
TMEM39B-203ENST00000441402 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
TMEM39B-203ENST00000441402 GRIN2AQ12879 1464 aa26.54■■□□□ 1.84
TMEM39B-203ENST00000441402 PCGF6Q9BYE7 350 aa26.5■■□□□ 1.83
TMEM39B-203ENST00000441402 CHMP7Q8WUX9 453 aaPredicted RBP26.47■■□□□ 1.83
TMEM39B-203ENST00000441402 KIAA0586Q9BVV6 1533 aa26.46■■□□□ 1.83
TMEM39B-203ENST00000441402 IQGAP2Q13576 1575 aa26.46■■□□□ 1.83
TMEM39B-203ENST00000441402 SAMD9Q5K651 1589 aa26.46■■□□□ 1.83
TMEM39B-203ENST00000441402 APLP2Q06481 763 aa26.44■■□□□ 1.82
TMEM39B-203ENST00000441402 PPARGC1BQ86YN6 1023 aaKnown RBP26.41■■□□□ 1.82
TMEM39B-203ENST00000441402 UGGT2Q9NYU1 1516 aa26.39■■□□□ 1.82
TMEM39B-203ENST00000441402 NUP160Q12769 1436 aa26.39■■□□□ 1.82
TMEM39B-203ENST00000441402 FHOD3Q2V2M9 1422 aa26.37■■□□□ 1.81
TMEM39B-203ENST00000441402 P3H3Q8IVL6 736 aa26.35■■□□□ 1.81
TMEM39B-203ENST00000441402 FMN1Q68DA7 1419 aa26.35■■□□□ 1.81
TMEM39B-203ENST00000441402 MAP3K1Q13233 1512 aa26.35■■□□□ 1.81
TMEM39B-203ENST00000441402 CEP170Q5SW79 1584 aa26.34■■□□□ 1.81
TMEM39B-203ENST00000441402 FBLN2P98095 1184 aa26.31■■□□□ 1.8
TMEM39B-203ENST00000441402 CASKIN1Q8WXD9 1431 aa26.29■■□□□ 1.8
TMEM39B-203ENST00000441402 FYCO1Q9BQS8 1478 aa26.27■■□□□ 1.8
TMEM39B-203ENST00000441402 PCF11O94913 1555 aaKnown RBP26.24■■□□□ 1.79
TMEM39B-203ENST00000441402 DISP1Q96F81 1524 aa26.22■■□□□ 1.79
TMEM39B-203ENST00000441402 TIAM1Q13009 1591 aa26.21■■□□□ 1.79
TMEM39B-203ENST00000441402 CHD1O14646 1710 aa26.2■■□□□ 1.78
TMEM39B-203ENST00000441402 KIAA0556O60303 1618 aa26.19■■□□□ 1.78
TMEM39B-203ENST00000441402 KANK4Q5T7N3 995 aaPredicted RBP26.19■■□□□ 1.78
TMEM39B-203ENST00000441402 JPH4Q96JJ6 628 aa26.19■■□□□ 1.78
TMEM39B-203ENST00000441402 TTBK1Q5TCY1 1321 aaPredicted RBP26.15■■□□□ 1.78
TMEM39B-203ENST00000441402 CFAP43Q8NDM7 1665 aa26.14■■□□□ 1.77
TMEM39B-203ENST00000441402 CARMIL2Q6F5E8 1435 aa26.11■■□□□ 1.77
TMEM39B-203ENST00000441402 LRRC9Q6ZRR7 1453 aa26.1■■□□□ 1.77
TMEM39B-203ENST00000441402 ATP1B4Q9UN42 357 aaPredicted RBP26.06■■□□□ 1.76
TMEM39B-203ENST00000441402 HECW1Q76N89 1606 aa26.03■■□□□ 1.76
TMEM39B-203ENST00000441402 CCDC18Q5T9S5 1454 aa26.02■■□□□ 1.76
TMEM39B-203ENST00000441402 SHROOM2Q13796 1616 aa26.02■■□□□ 1.76
TMEM39B-203ENST00000441402 LRRIQ1Q96JM4 1722 aa26.01■■□□□ 1.75
TMEM39B-203ENST00000441402 PRG4Q92954 1404 aaPredicted RBP25.97■■□□□ 1.75
TMEM39B-203ENST00000441402 CLASP1Q7Z460 1538 aa25.96■■□□□ 1.75
TMEM39B-203ENST00000441402 RRBP1Q9P2E9 1410 aaKnown RBP25.96■■□□□ 1.75
TMEM39B-203ENST00000441402 EPRSP07814 1512 aaKnown RBP25.95■■□□□ 1.74
TMEM39B-203ENST00000441402 RAPGEF6Q8TEU7 1601 aa25.94■■□□□ 1.74
TMEM39B-203ENST00000441402 MTUS2Q5JR59 1369 aa25.89■■□□□ 1.74
TMEM39B-203ENST00000441402 NUP153P49790 1475 aaKnown RBP25.89■■□□□ 1.73
TMEM39B-203ENST00000441402 EHBP1L1Q8N3D4 1523 aa25.86■■□□□ 1.73
TMEM39B-203ENST00000441402 ABCA8O94911 1581 aa25.85■■□□□ 1.73
TMEM39B-203ENST00000441402 PLB1Q6P1J6 1458 aa25.84■■□□□ 1.73
TMEM39B-203ENST00000441402 CCNB3Q8WWL7 1395 aa25.84■■□□□ 1.73
TMEM39B-203ENST00000441402 PTPRGP23470 1445 aa25.84■■□□□ 1.73
TMEM39B-203ENST00000441402 PHLDB1Q86UU1 1377 aa25.83■■□□□ 1.73
TMEM39B-203ENST00000441402 CDK13Q14004 1512 aaKnown RBP25.81■■□□□ 1.72
TMEM39B-203ENST00000441402 MAGI3Q5TCQ9 1506 aa25.81■■□□□ 1.72
TMEM39B-203ENST00000441402 HRCP23327 699 aa25.79■■□□□ 1.72
TMEM39B-203ENST00000441402 SUPT6HQ7KZ85 1726 aaKnown RBP25.79■■□□□ 1.72
TMEM39B-203ENST00000441402 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
TMEM39B-203ENST00000441402 CDK11AQ9UQ88 783 aaPredicted RBP25.77■■□□□ 1.72
TMEM39B-203ENST00000441402 NCOA2Q15596 1464 aa25.76■■□□□ 1.71
TMEM39B-203ENST00000441402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.75■■□□□ 1.71
TMEM39B-203ENST00000441402 OSCARQ8IYS5 282 aa25.73■■□□□ 1.71
TMEM39B-203ENST00000441402 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
TMEM39B-203ENST00000441402 HNRNPUL2Q1KMD3 747 aaKnown RBP25.71■■□□□ 1.71
TMEM39B-203ENST00000441402 UACAQ9BZF9 1416 aa25.7■■□□□ 1.7
TMEM39B-203ENST00000441402 ATP10BO94823 1461 aa25.68■■□□□ 1.7
TMEM39B-203ENST00000441402 MYOM3Q5VTT5 1437 aa25.68■■□□□ 1.7
TMEM39B-203ENST00000441402 FGD6Q6ZV73 1430 aa25.67■■□□□ 1.7
TMEM39B-203ENST00000441402 ARID3CA6NKF2 412 aa25.66■■□□□ 1.7
TMEM39B-203ENST00000441402 TROQ12816 1431 aaPredicted RBP25.66■■□□□ 1.7
TMEM39B-203ENST00000441402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.63■■□□□ 1.69
TMEM39B-203ENST00000441402 UHRF1BP1LA0JNW5 1464 aa25.61■■□□□ 1.69
TMEM39B-203ENST00000441402 ABCC2Q92887 1545 aa25.6■■□□□ 1.69
TMEM39B-203ENST00000441402 MIA2Q96PC5 1412 aa25.59■■□□□ 1.69
TMEM39B-203ENST00000441402 PLEKHD1A6NEE1 506 aa25.58■■□□□ 1.69
TMEM39B-203ENST00000441402 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
TMEM39B-203ENST00000441402 ADCY10Q96PN6 1610 aa25.58■■□□□ 1.69
TMEM39B-203ENST00000441402 FAM50AQ14320 339 aaKnown RBP25.57■■□□□ 1.68
TMEM39B-203ENST00000441402 TCOF1Q13428 1488 aaKnown RBP25.55■■□□□ 1.68
TMEM39B-203ENST00000441402 PTPN23Q9H3S7 1636 aa25.52■■□□□ 1.68
TMEM39B-203ENST00000441402 CCER1Q8TC90 406 aaPredicted RBP25.48■■□□□ 1.67
TMEM39B-203ENST00000441402 KDM5BQ9UGL1 1544 aa25.48■■□□□ 1.67
TMEM39B-203ENST00000441402 ITGAEP38570 1179 aa25.46■■□□□ 1.67
TMEM39B-203ENST00000441402 KIF14Q15058 1648 aa25.45■■□□□ 1.67
TMEM39B-203ENST00000441402 ABCC10Q5T3U5 1492 aa25.44■■□□□ 1.66
TMEM39B-203ENST00000441402 GPATCH8Q9UKJ3 1502 aaKnown RBP25.43■■□□□ 1.66
TMEM39B-203ENST00000441402 ITSN2Q9NZM3 1697 aa25.42■■□□□ 1.66
TMEM39B-203ENST00000441402 ZCCHC11Q5TAX3 1644 aaKnown RBP25.39■■□□□ 1.66
TMEM39B-203ENST00000441402 SETD5Q9C0A6 1442 aa25.39■■□□□ 1.65
TMEM39B-203ENST00000441402 PTPRKQ15262 1439 aa25.37■■□□□ 1.65
TMEM39B-203ENST00000441402 CFDP1Q9UEE9 299 aaPredicted RBP25.35■■□□□ 1.65
TMEM39B-203ENST00000441402 CDC42BPAQ5VT25 1732 aa25.34■■□□□ 1.65
TMEM39B-203ENST00000441402 RAB3GAP2Q9H2M9 1393 aa25.33■■□□□ 1.65
TMEM39B-203ENST00000441402 HFM1A2PYH4 1435 aa25.3■■□□□ 1.64
TMEM39B-203ENST00000441402 CLSPNQ9HAW4 1339 aa25.29■■□□□ 1.64
TMEM39B-203ENST00000441402 AKNAQ7Z591 1439 aa25.28■■□□□ 1.64
TMEM39B-203ENST00000441402 DNMT1P26358 1616 aaKnown RBP25.28■■□□□ 1.64
TMEM39B-203ENST00000441402 DHX57Q6P158 1386 aaKnown RBP25.27■■□□□ 1.64
TMEM39B-203ENST00000441402 CAMSAP2Q08AD1 1489 aa25.27■■□□□ 1.64
TMEM39B-203ENST00000441402 ZNF644Q9H582 1327 aaPredicted RBP25.27■■□□□ 1.64
TMEM39B-203ENST00000441402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.26■■□□□ 1.63
TMEM39B-203ENST00000441402 DAPK1P53355 1430 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms