RNA–Protein interactions for RNA: ENST00000440366.1

ZNF490-203, Transcript of zinc finger protein 490, humanhuman

TSL 4

Gene ZNF490, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-203ENST00000440366 JPH4Q96JJ6 628 aa12.59□□□□□ -0.39
ZNF490-203ENST00000440366 FHAD1B1AJZ9 1412 aa12.59□□□□□ -0.39
ZNF490-203ENST00000440366 SHROOM2Q13796 1616 aa12.58□□□□□ -0.4
ZNF490-203ENST00000440366 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
ZNF490-203ENST00000440366 PRG4Q92954 1404 aaPredicted RBP12.55□□□□□ -0.4
ZNF490-203ENST00000440366 FAM69CQ0P6D2 419 aa12.55□□□□□ -0.4
ZNF490-203ENST00000440366 KIF13AQ9H1H9 1805 aa12.53□□□□□ -0.4
ZNF490-203ENST00000440366 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.41
ZNF490-203ENST00000440366 KDM4FA0A1W2PPD8 638 aa12.51□□□□□ -0.41
ZNF490-203ENST00000440366 SUPT5HO00267 1087 aaKnown RBP12.5□□□□□ -0.41
ZNF490-203ENST00000440366 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
ZNF490-203ENST00000440366 SCAF1Q9H7N4 1312 aaKnown RBP12.5□□□□□ -0.41
ZNF490-203ENST00000440366 ABCC10Q5T3U5 1492 aa12.5□□□□□ -0.41
ZNF490-203ENST00000440366 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
ZNF490-203ENST00000440366 BIVM-ERCC5R4GMW8 1640 aa12.47□□□□□ -0.41
ZNF490-203ENST00000440366 MAPKBP1O60336 1514 aa12.44□□□□□ -0.42
ZNF490-203ENST00000440366 KCNA4P22459 653 aa12.42□□□□□ -0.42
ZNF490-203ENST00000440366 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
ZNF490-203ENST00000440366 DIP2BQ9P265 1576 aa12.41□□□□□ -0.42
ZNF490-203ENST00000440366 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
ZNF490-203ENST00000440366 RUSC2Q8N2Y8 1516 aa12.39□□□□□ -0.43
ZNF490-203ENST00000440366 IGF1RP08069 1367 aa12.39□□□□□ -0.43
ZNF490-203ENST00000440366 KIAA0586Q9BVV6 1533 aa12.38□□□□□ -0.43
ZNF490-203ENST00000440366 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
ZNF490-203ENST00000440366 KDM6BO15054 1643 aa12.36□□□□□ -0.43
ZNF490-203ENST00000440366 PTPRGP23470 1445 aa12.34□□□□□ -0.43
ZNF490-203ENST00000440366 TSPOAP1O95153 1857 aa12.31□□□□□ -0.44
ZNF490-203ENST00000440366 TTBK1Q5TCY1 1321 aaPredicted RBP12.29□□□□□ -0.44
ZNF490-203ENST00000440366 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
ZNF490-203ENST00000440366 TNIKQ9UKE5 1360 aa12.28□□□□□ -0.44
ZNF490-203ENST00000440366 ASXL2Q76L83 1435 aa12.28□□□□□ -0.44
ZNF490-203ENST00000440366 ABCC2Q92887 1545 aa12.27□□□□□ -0.44
ZNF490-203ENST00000440366 COL17A1Q9UMD9 1497 aaPredicted RBP12.27□□□□□ -0.45
ZNF490-203ENST00000440366 CARMIL1Q5VZK9 1371 aa12.26□□□□□ -0.45
ZNF490-203ENST00000440366 PLB1Q6P1J6 1458 aa12.26□□□□□ -0.45
ZNF490-203ENST00000440366 CARMIL2Q6F5E8 1435 aa12.25□□□□□ -0.45
ZNF490-203ENST00000440366 GLI2P10070 1586 aa12.25□□□□□ -0.45
ZNF490-203ENST00000440366 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
ZNF490-203ENST00000440366 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
ZNF490-203ENST00000440366 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
ZNF490-203ENST00000440366 ADGRL1O94910 1474 aa12.23□□□□□ -0.45
ZNF490-203ENST00000440366 CUL7Q14999 1698 aa12.22□□□□□ -0.45
ZNF490-203ENST00000440366 PPRC1Q5VV67 1664 aaKnown RBP12.22□□□□□ -0.45
ZNF490-203ENST00000440366 UACAQ9BZF9 1416 aa12.21□□□□□ -0.45
ZNF490-203ENST00000440366 EPRSP07814 1512 aaKnown RBP12.19□□□□□ -0.46
ZNF490-203ENST00000440366 DISP1Q96F81 1524 aa12.18□□□□□ -0.46
ZNF490-203ENST00000440366 KDM5BQ9UGL1 1544 aa12.18□□□□□ -0.46
ZNF490-203ENST00000440366 IQGAP2Q13576 1575 aa12.15□□□□□ -0.46
ZNF490-203ENST00000440366 MAP3K4Q9Y6R4 1608 aa12.15□□□□□ -0.47
ZNF490-203ENST00000440366 MAPK8IP2Q13387 824 aaPredicted RBP12.14□□□□□ -0.47
ZNF490-203ENST00000440366 TEX14Q8IWB6 1497 aa12.14□□□□□ -0.47
ZNF490-203ENST00000440366 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
ZNF490-203ENST00000440366 UGGT2Q9NYU1 1516 aa12.11□□□□□ -0.47
ZNF490-203ENST00000440366 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
ZNF490-203ENST00000440366 WDR7Q9Y4E6 1490 aa12.08□□□□□ -0.47
ZNF490-203ENST00000440366 RAPGEF2Q9Y4G8 1499 aa12.08□□□□□ -0.47
ZNF490-203ENST00000440366 ZCCHC11Q5TAX3 1644 aaKnown RBP12.08□□□□□ -0.48
ZNF490-203ENST00000440366 KCNH8Q96L42 1107 aa12.08□□□□□ -0.48
ZNF490-203ENST00000440366 CD109Q6YHK3 1445 aa12.08□□□□□ -0.48
ZNF490-203ENST00000440366 MAGI3Q5TCQ9 1506 aa12.06□□□□□ -0.48
ZNF490-203ENST00000440366 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
ZNF490-203ENST00000440366 FBXO41Q8TF61 875 aa12.04□□□□□ -0.48
ZNF490-203ENST00000440366 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.49
ZNF490-203ENST00000440366 ARAP3Q8WWN8 1544 aa11.99□□□□□ -0.49
ZNF490-203ENST00000440366 ABCA8O94911 1581 aa11.99□□□□□ -0.49
ZNF490-203ENST00000440366 CFAP43Q8NDM7 1665 aa11.98□□□□□ -0.49
ZNF490-203ENST00000440366 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
ZNF490-203ENST00000440366 RNF216Q9NWF9 866 aaPredicted RBP11.96□□□□□ -0.49
ZNF490-203ENST00000440366 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
ZNF490-203ENST00000440366 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
ZNF490-203ENST00000440366 ATP10BO94823 1461 aa11.95□□□□□ -0.5
ZNF490-203ENST00000440366 PTPRMP28827 1452 aa11.95□□□□□ -0.5
ZNF490-203ENST00000440366 KIF21BO75037 1637 aa11.94□□□□□ -0.5
ZNF490-203ENST00000440366 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
ZNF490-203ENST00000440366 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
ZNF490-203ENST00000440366 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
ZNF490-203ENST00000440366 ADAMTSL3P82987 1691 aa11.91□□□□□ -0.5
ZNF490-203ENST00000440366 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
ZNF490-203ENST00000440366 FAM9AQ8IZU1 332 aaPredicted RBP11.89□□□□□ -0.51
ZNF490-203ENST00000440366 CTTNBP2Q8WZ74 1663 aa11.89□□□□□ -0.51
ZNF490-203ENST00000440366 ABCA9Q8IUA7 1624 aa11.87□□□□□ -0.51
ZNF490-203ENST00000440366 NEO1Q92859 1461 aa11.87□□□□□ -0.51
ZNF490-203ENST00000440366 ARID4BQ4LE39 1312 aaPredicted RBP11.86□□□□□ -0.51
ZNF490-203ENST00000440366 LMTK3Q96Q04 1460 aa11.86□□□□□ -0.51
ZNF490-203ENST00000440366 HOXD11P31277 338 aaPredicted RBP11.85□□□□□ -0.51
ZNF490-203ENST00000440366 HSPA2P54652 639 aa11.84□□□□□ -0.51
ZNF490-203ENST00000440366 PCF11O94913 1555 aaKnown RBP11.84□□□□□ -0.51
ZNF490-203ENST00000440366 BCORL1Q5H9F3 1711 aa11.83□□□□□ -0.52
ZNF490-203ENST00000440366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
ZNF490-203ENST00000440366 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
ZNF490-203ENST00000440366 FRMPD1Q5SYB0 1578 aa11.82□□□□□ -0.52
ZNF490-203ENST00000440366 MADDQ8WXG6 1647 aa11.81□□□□□ -0.52
ZNF490-203ENST00000440366 PLEKHD1A6NEE1 506 aa11.8□□□□□ -0.52
ZNF490-203ENST00000440366 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
ZNF490-203ENST00000440366 FHOD3Q2V2M9 1422 aa11.79□□□□□ -0.52
ZNF490-203ENST00000440366 NUP153P49790 1475 aaKnown RBP11.79□□□□□ -0.52
ZNF490-203ENST00000440366 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
ZNF490-203ENST00000440366 AKNAQ7Z591 1439 aa11.78□□□□□ -0.52
ZNF490-203ENST00000440366 DENND4BO75064 1496 aaPredicted RBP11.78□□□□□ -0.52
ZNF490-203ENST00000440366 RAPGEF6Q8TEU7 1601 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms