RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 ANP32AP39687 249 aaKnown RBP15.61■□□□□ 0.09
CCBE1-202ENST00000439986 PKNOX2Q96KN3 472 aa15.6■□□□□ 0.09
CCBE1-202ENST00000439986 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.09
CCBE1-202ENST00000439986 TNIKQ9UKE5 1360 aa15.58■□□□□ 0.08
CCBE1-202ENST00000439986 EEA1Q15075 1411 aa15.57■□□□□ 0.08
CCBE1-202ENST00000439986 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
CCBE1-202ENST00000439986 ZNF526Q8TF50 670 aaPredicted RBP15.57■□□□□ 0.08
CCBE1-202ENST00000439986 HSP90AA1P07900 732 aaKnown RBP15.56■□□□□ 0.08
CCBE1-202ENST00000439986 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
CCBE1-202ENST00000439986 LAS1LQ9Y4W2 734 aaKnown RBP15.56■□□□□ 0.08
CCBE1-202ENST00000439986 TAOK2Q9UL54 1235 aa15.55■□□□□ 0.08
CCBE1-202ENST00000439986 HIRIP3Q9BW71 556 aaPredicted RBP15.55■□□□□ 0.08
CCBE1-202ENST00000439986 CALRP27797 417 aaKnown RBP15.54■□□□□ 0.08
CCBE1-202ENST00000439986 ANP32EQ9BTT0 268 aa15.54■□□□□ 0.08
CCBE1-202ENST00000439986 NAP1L5Q96NT1 182 aaPredicted RBP15.54■□□□□ 0.08
CCBE1-202ENST00000439986 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
CCBE1-202ENST00000439986 TIMELESSQ9UNS1 1208 aa15.54■□□□□ 0.08
CCBE1-202ENST00000439986 FAM9BQ8IZU0 186 aa15.53■□□□□ 0.08
CCBE1-202ENST00000439986 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
CCBE1-202ENST00000439986 A0A0G2JS52 829 aa15.51■□□□□ 0.07
CCBE1-202ENST00000439986 SUPT16HQ9Y5B9 1047 aaKnown RBP15.51■□□□□ 0.07
CCBE1-202ENST00000439986 CCDC9Q9Y3X0 531 aaKnown RBP15.51■□□□□ 0.07
CCBE1-202ENST00000439986 IRX6P78412 446 aaPredicted RBP15.5■□□□□ 0.07
CCBE1-202ENST00000439986 ESF1Q9H501 851 aaKnown RBP15.5■□□□□ 0.07
CCBE1-202ENST00000439986 ZBTB7CA1YPR0 619 aa15.5■□□□□ 0.07
CCBE1-202ENST00000439986 HSP90B1P14625 803 aaKnown RBP15.47■□□□□ 0.07
CCBE1-202ENST00000439986 ANP32BQ92688 251 aaKnown RBP15.46■□□□□ 0.07
CCBE1-202ENST00000439986 TRIM44Q96DX7 344 aaPredicted RBP15.45■□□□□ 0.06
CCBE1-202ENST00000439986 PDIA4P13667 645 aaKnown RBP15.43■□□□□ 0.06
CCBE1-202ENST00000439986 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
CCBE1-202ENST00000439986 APPP05067 770 aa15.42■□□□□ 0.06
CCBE1-202ENST00000439986 CCDC136Q96JN2 1154 aa15.41■□□□□ 0.06
CCBE1-202ENST00000439986 MRS2Q9HD23 443 aa15.41■□□□□ 0.06
CCBE1-202ENST00000439986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCBE1-202ENST00000439986 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
CCBE1-202ENST00000439986 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
CCBE1-202ENST00000439986 SOGA1O94964 1423 aa15.38■□□□□ 0.05
CCBE1-202ENST00000439986 CHIC2Q9UKJ5 165 aa15.37■□□□□ 0.05
CCBE1-202ENST00000439986 USP35Q9P2H5 1018 aa15.35■□□□□ 0.05
CCBE1-202ENST00000439986 UPF2Q9HAU5 1272 aaKnown RBP15.34■□□□□ 0.05
CCBE1-202ENST00000439986 FBXO3Q9UK99 471 aa15.33■□□□□ 0.05
CCBE1-202ENST00000439986 CFAP44Q96MT7 982 aa15.33■□□□□ 0.04
CCBE1-202ENST00000439986 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
CCBE1-202ENST00000439986 TAF7LQ5H9L4 462 aa15.32■□□□□ 0.04
CCBE1-202ENST00000439986 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
CCBE1-202ENST00000439986 TMC1Q8TDI8 760 aa15.31■□□□□ 0.04
CCBE1-202ENST00000439986 SIN3AQ96ST3 1273 aa15.31■□□□□ 0.04
CCBE1-202ENST00000439986 EIF4G2P78344 907 aaKnown RBP eCLIP15.3■□□□□ 0.04
CCBE1-202ENST00000439986 MTUS2Q5JR59 1369 aa15.29■□□□□ 0.04
CCBE1-202ENST00000439986 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.29■□□□□ 0.04
CCBE1-202ENST00000439986 KCNA4P22459 653 aa15.28■□□□□ 0.04
CCBE1-202ENST00000439986 KLHL34Q8N239 644 aa15.25■□□□□ 0.03
CCBE1-202ENST00000439986 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
CCBE1-202ENST00000439986 CCDC88BA6NC98 1476 aa15.24■□□□□ 0.03
CCBE1-202ENST00000439986 NACADO15069 1562 aa15.23■□□□□ 0.03
CCBE1-202ENST00000439986 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
CCBE1-202ENST00000439986 VPS8Q8N3P4 1428 aa15.23■□□□□ 0.03
CCBE1-202ENST00000439986 WDR43Q15061 677 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCBE1-202ENST00000439986 RRP7BPQ9NSQ0 103 aa15.23■□□□□ 0.03
CCBE1-202ENST00000439986 CCNB3Q8WWL7 1395 aa15.23■□□□□ 0.03
CCBE1-202ENST00000439986 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
CCBE1-202ENST00000439986 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
CCBE1-202ENST00000439986 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
CCBE1-202ENST00000439986 PPP4R2Q9NY27 417 aa15.19■□□□□ 0.02
CCBE1-202ENST00000439986 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
CCBE1-202ENST00000439986 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
CCBE1-202ENST00000439986 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.16■□□□□ 0.02
CCBE1-202ENST00000439986 BRD2P25440 801 aaKnown RBP15.16■□□□□ 0.02
CCBE1-202ENST00000439986 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
CCBE1-202ENST00000439986 CCER2I3L3R5 266 aa15.15■□□□□ 0.02
CCBE1-202ENST00000439986 PATL2C9JE40 543 aaKnown RBP15.14■□□□□ 0.01
CCBE1-202ENST00000439986 PPM1GO15355 546 aaPredicted RBP15.14■□□□□ 0.01
CCBE1-202ENST00000439986 B4GALNT3Q6L9W6 998 aa15.12■□□□□ 0.01
CCBE1-202ENST00000439986 MYH16Q9H6N6 1097 aa15.12■□□□□ 0.01
CCBE1-202ENST00000439986 PTMAP06454 111 aaKnown RBP15.12■□□□□ 0.01
CCBE1-202ENST00000439986 BAZ1BQ9UIG0 1483 aaKnown RBP15.12■□□□□ 0.01
CCBE1-202ENST00000439986 PSMD1Q99460 953 aa15.1■□□□□ 0.01
CCBE1-202ENST00000439986 NOP58Q9Y2X3 529 aaKnown RBP15.1■□□□□ 0.01
CCBE1-202ENST00000439986 SETD5Q9C0A6 1442 aa15.07■□□□□ 0
CCBE1-202ENST00000439986 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
CCBE1-202ENST00000439986 RAB3GAP2Q9H2M9 1393 aa15.05■□□□□ -0
CCBE1-202ENST00000439986 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
CCBE1-202ENST00000439986 PPP1R15AO75807 674 aaPredicted RBP15.03■□□□□ -0
CCBE1-202ENST00000439986 DDRGK1Q96HY6 314 aa15.03■□□□□ -0
CCBE1-202ENST00000439986 WIZO95785 1651 aa15.02■□□□□ -0
CCBE1-202ENST00000439986 KCNH8Q96L42 1107 aa15.02■□□□□ -0
CCBE1-202ENST00000439986 DHX57Q6P158 1386 aaKnown RBP15.01□□□□□ -0.01
CCBE1-202ENST00000439986 TSPY4P0CV99 314 aa15.01□□□□□ -0.01
CCBE1-202ENST00000439986 TSPY10P0CW01 314 aa15.01□□□□□ -0.01
CCBE1-202ENST00000439986 DEKP35659 375 aaKnown RBP15.01□□□□□ -0.01
CCBE1-202ENST00000439986 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
CCBE1-202ENST00000439986 RGL3Q3MIN7 710 aa14.99□□□□□ -0.01
CCBE1-202ENST00000439986 STK11IPQ8N1F8 1099 aa14.97□□□□□ -0.01
CCBE1-202ENST00000439986 HSPA5P11021 654 aaKnown RBP14.96□□□□□ -0.01
CCBE1-202ENST00000439986 RUSC2Q8N2Y8 1516 aa14.96□□□□□ -0.01
CCBE1-202ENST00000439986 NEUROD2Q15784 382 aa14.95□□□□□ -0.02
CCBE1-202ENST00000439986 CARD11Q9BXL7 1154 aa14.94□□□□□ -0.02
CCBE1-202ENST00000439986 LMOD2Q6P5Q4 547 aa14.94□□□□□ -0.02
CCBE1-202ENST00000439986 CARMIL1Q5VZK9 1371 aa14.93□□□□□ -0.02
CCBE1-202ENST00000439986 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms