RNA–Protein interactions for RNA: ENST00000439526.6

FMR1-207, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 3,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-207ENST00000439526 MTUS2Q5JR59 1369 aa27.78■■■□□ 2.04
FMR1-207ENST00000439526 ABCA10Q8WWZ4 1543 aa27.78■■■□□ 2.04
FMR1-207ENST00000439526 NEUROD1Q13562 356 aa27.76■■■□□ 2.03
FMR1-207ENST00000439526 CHIC2Q9UKJ5 165 aa27.7■■■□□ 2.03
FMR1-207ENST00000439526 FHAD1B1AJZ9 1412 aa27.7■■■□□ 2.02
FMR1-207ENST00000439526 CCNB3Q8WWL7 1395 aa27.69■■■□□ 2.02
FMR1-207ENST00000439526 MRC2Q9UBG0 1479 aa27.67■■■□□ 2.02
FMR1-207ENST00000439526 DIEXFQ68CQ4 756 aaKnown RBP27.66■■■□□ 2.02
FMR1-207ENST00000439526 PRDM2Q13029 1718 aa27.66■■■□□ 2.02
FMR1-207ENST00000439526 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
FMR1-207ENST00000439526 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
FMR1-207ENST00000439526 ZNF777Q9ULD5 760 aaPredicted RBP27.61■■■□□ 2.01
FMR1-207ENST00000439526 YTHDC1Q96MU7 727 aaKnown RBP27.58■■■□□ 2.01
FMR1-207ENST00000439526 TRIM52Q96A61 297 aa27.55■■■□□ 2
FMR1-207ENST00000439526 RRP7BPQ9NSQ0 103 aa27.51■■□□□ 1.99
FMR1-207ENST00000439526 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
FMR1-207ENST00000439526 ZNF316A6NFI3 1004 aaPredicted RBP27.49■■□□□ 1.99
FMR1-207ENST00000439526 PHLDB1Q86UU1 1377 aa27.49■■□□□ 1.99
FMR1-207ENST00000439526 GRIN2BQ13224 1484 aa27.45■■□□□ 1.99
FMR1-207ENST00000439526 CDK11AQ9UQ88 783 aaPredicted RBP27.4■■□□□ 1.98
FMR1-207ENST00000439526 JPH4Q96JJ6 628 aa27.39■■□□□ 1.98
FMR1-207ENST00000439526 SIN3AQ96ST3 1273 aa27.39■■□□□ 1.98
FMR1-207ENST00000439526 LRRC9Q6ZRR7 1453 aa27.39■■□□□ 1.98
FMR1-207ENST00000439526 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
FMR1-207ENST00000439526 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
FMR1-207ENST00000439526 RAB3GAP2Q9H2M9 1393 aa27.35■■□□□ 1.97
FMR1-207ENST00000439526 PCF11O94913 1555 aaKnown RBP27.33■■□□□ 1.97
FMR1-207ENST00000439526 CUL7Q14999 1698 aa27.33■■□□□ 1.96
FMR1-207ENST00000439526 CASKIN1Q8WXD9 1431 aa27.3■■□□□ 1.96
FMR1-207ENST00000439526 TIAM1Q13009 1591 aa27.29■■□□□ 1.96
FMR1-207ENST00000439526 HIRIP3Q9BW71 556 aaPredicted RBP27.28■■□□□ 1.96
FMR1-207ENST00000439526 DHX57Q6P158 1386 aaKnown RBP27.26■■□□□ 1.96
FMR1-207ENST00000439526 KCNH8Q96L42 1107 aa27.23■■□□□ 1.95
FMR1-207ENST00000439526 RRBP1Q9P2E9 1410 aaKnown RBP27.23■■□□□ 1.95
FMR1-207ENST00000439526 SETD5Q9C0A6 1442 aa27.21■■□□□ 1.95
FMR1-207ENST00000439526 ABCA5Q8WWZ7 1642 aa27.2■■□□□ 1.95
FMR1-207ENST00000439526 PLEKHD1A6NEE1 506 aa27.2■■□□□ 1.94
FMR1-207ENST00000439526 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
FMR1-207ENST00000439526 EFCAB5A4FU69 1503 aa27.19■■□□□ 1.94
FMR1-207ENST00000439526 CFDP1Q9UEE9 299 aaPredicted RBP27.19■■□□□ 1.94
FMR1-207ENST00000439526 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
FMR1-207ENST00000439526 MYT1LQ9UL68 1186 aa27.17■■□□□ 1.94
FMR1-207ENST00000439526 ZNF644Q9H582 1327 aaPredicted RBP27.15■■□□□ 1.94
FMR1-207ENST00000439526 IQGAP2Q13576 1575 aa27.11■■□□□ 1.93
FMR1-207ENST00000439526 CDK13Q14004 1512 aaKnown RBP27.1■■□□□ 1.93
FMR1-207ENST00000439526 FOXD1Q16676 465 aa27.1■■□□□ 1.93
FMR1-207ENST00000439526 CARMIL2Q6F5E8 1435 aa27.1■■□□□ 1.93
FMR1-207ENST00000439526 FGD6Q6ZV73 1430 aa27.09■■□□□ 1.93
FMR1-207ENST00000439526 GRIN2AQ12879 1464 aa27.09■■□□□ 1.93
FMR1-207ENST00000439526 MIER1Q8N108 512 aa27.08■■□□□ 1.93
FMR1-207ENST00000439526 NCOA2Q15596 1464 aa27.08■■□□□ 1.93
FMR1-207ENST00000439526 CTTNBP2Q8WZ74 1663 aa27.07■■□□□ 1.92
FMR1-207ENST00000439526 WDR62O43379 1518 aa27.07■■□□□ 1.92
FMR1-207ENST00000439526 ZNF326Q5BKZ1 582 aaKnown RBP27.05■■□□□ 1.92
FMR1-207ENST00000439526 CNGB1Q14028 1251 aaPredicted RBP27.04■■□□□ 1.92
FMR1-207ENST00000439526 KIAA0586Q9BVV6 1533 aa27.04■■□□□ 1.92
FMR1-207ENST00000439526 CENPBP07199 599 aaPredicted RBP27.03■■□□□ 1.92
FMR1-207ENST00000439526 TONSLQ96HA7 1378 aa27.02■■□□□ 1.92
FMR1-207ENST00000439526 ADAMTS12P58397 1594 aa27.02■■□□□ 1.92
FMR1-207ENST00000439526 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.91
FMR1-207ENST00000439526 PBRM1Q86U86 1689 aa27■■□□□ 1.91
FMR1-207ENST00000439526 WDR97A6NE52 1622 aa26.99■■□□□ 1.91
FMR1-207ENST00000439526 MYOM3Q5VTT5 1437 aa26.98■■□□□ 1.91
FMR1-207ENST00000439526 POLR3GLQ9BT43 218 aa26.98■■□□□ 1.91
FMR1-207ENST00000439526 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
FMR1-207ENST00000439526 CLSPNQ9HAW4 1339 aa26.96■■□□□ 1.91
FMR1-207ENST00000439526 PLB1Q6P1J6 1458 aa26.96■■□□□ 1.91
FMR1-207ENST00000439526 EPRSP07814 1512 aaKnown RBP26.95■■□□□ 1.9
FMR1-207ENST00000439526 SLC4A1APQ9BWU0 796 aaKnown RBP26.94■■□□□ 1.9
FMR1-207ENST00000439526 DDX10Q13206 875 aaKnown RBP26.94■■□□□ 1.9
FMR1-207ENST00000439526 PRG4Q92954 1404 aaPredicted RBP26.94■■□□□ 1.9
FMR1-207ENST00000439526 PTPRGP23470 1445 aa26.93■■□□□ 1.9
FMR1-207ENST00000439526 TSPY4P0CV99 314 aa26.92■■□□□ 1.9
FMR1-207ENST00000439526 TSPY10P0CW01 314 aa26.92■■□□□ 1.9
FMR1-207ENST00000439526 CCDC18Q5T9S5 1454 aa26.91■■□□□ 1.9
FMR1-207ENST00000439526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.91■■□□□ 1.98e-7■■□□□ 12.1
FMR1-207ENST00000439526 MAGI1Q96QZ7 1491 aaPredicted RBP26.9■■□□□ 1.9
FMR1-207ENST00000439526 MAP3K1Q13233 1512 aa26.9■■□□□ 1.9
FMR1-207ENST00000439526 HNRNPMP52272 730 aaKnown RBP eCLIP26.87■■□□□ 1.89
FMR1-207ENST00000439526 PTPRKQ15262 1439 aa26.82■■□□□ 1.88
FMR1-207ENST00000439526 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
FMR1-207ENST00000439526 HECW1Q76N89 1606 aa26.79■■□□□ 1.88
FMR1-207ENST00000439526 SAMD9Q5K651 1589 aa26.79■■□□□ 1.88
FMR1-207ENST00000439526 MPHOSPH9Q99550 1183 aa26.78■■□□□ 1.88
FMR1-207ENST00000439526 EHBP1L1Q8N3D4 1523 aa26.78■■□□□ 1.88
FMR1-207ENST00000439526 DISP1Q96F81 1524 aa26.78■■□□□ 1.88
FMR1-207ENST00000439526 CFAP43Q8NDM7 1665 aa26.74■■□□□ 1.87
FMR1-207ENST00000439526 MAGI3Q5TCQ9 1506 aa26.73■■□□□ 1.87
FMR1-207ENST00000439526 SUPT6HQ7KZ85 1726 aaKnown RBP26.72■■□□□ 1.87
FMR1-207ENST00000439526 NUP153P49790 1475 aaKnown RBP26.72■■□□□ 1.87
FMR1-207ENST00000439526 UGGT2Q9NYU1 1516 aa26.71■■□□□ 1.87
FMR1-207ENST00000439526 KDM2AQ9Y2K7 1162 aa26.71■■□□□ 1.87
FMR1-207ENST00000439526 CEP170Q5SW79 1584 aa26.7■■□□□ 1.86
FMR1-207ENST00000439526 KIAA0556O60303 1618 aa26.68■■□□□ 1.86
FMR1-207ENST00000439526 PPP1R15AO75807 674 aaPredicted RBP26.68■■□□□ 1.86
FMR1-207ENST00000439526 NPM1P06748 294 aaKnown RBP eCLIP26.66■■□□□ 1.86
FMR1-207ENST00000439526 ACIN1Q9UKV3 1341 aaKnown RBP26.66■■□□□ 1.86
FMR1-207ENST00000439526 NAIPQ13075 1403 aa26.65■■□□□ 1.86
FMR1-207ENST00000439526 TROQ12816 1431 aaPredicted RBP26.65■■□□□ 1.86
FMR1-207ENST00000439526 GTF3C3Q9Y5Q9 886 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms