RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 TSPY4P0CV99 314 aa14.92□□□□□ -0.02
SEMA4D-211ENST00000438547 TSPY10P0CW01 314 aa14.92□□□□□ -0.02
SEMA4D-211ENST00000438547 CHGAP10645 457 aaKnown RBP14.92□□□□□ -0.02
SEMA4D-211ENST00000438547 GLIPR1L2Q4G1C9 344 aa14.91□□□□□ -0.02
SEMA4D-211ENST00000438547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.02
SEMA4D-211ENST00000438547 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
SEMA4D-211ENST00000438547 SIN3AQ96ST3 1273 aa14.86□□□□□ -0.03
SEMA4D-211ENST00000438547 ARXQ96QS3 562 aa14.83□□□□□ -0.04
SEMA4D-211ENST00000438547 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
SEMA4D-211ENST00000438547 PPP4R2Q9NY27 417 aa14.82□□□□□ -0.04
SEMA4D-211ENST00000438547 DDRGK1Q96HY6 314 aa14.81□□□□□ -0.04
SEMA4D-211ENST00000438547 SENP3-EIF4A1A0A087X0R7 540 aa14.8□□□□□ -0.04
SEMA4D-211ENST00000438547 KIF27Q86VH2 1401 aa14.79□□□□□ -0.04
SEMA4D-211ENST00000438547 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
SEMA4D-211ENST00000438547 CCNB3Q8WWL7 1395 aa14.76□□□□□ -0.05
SEMA4D-211ENST00000438547 BECN1Q14457 450 aa14.74□□□□□ -0.05
SEMA4D-211ENST00000438547 SOGA1O94964 1423 aa14.74□□□□□ -0.05
SEMA4D-211ENST00000438547 TIMELESSQ9UNS1 1208 aa14.73□□□□□ -0.05
SEMA4D-211ENST00000438547 RGL3Q3MIN7 710 aa14.73□□□□□ -0.05
SEMA4D-211ENST00000438547 PPM1GO15355 546 aaPredicted RBP14.72□□□□□ -0.05
SEMA4D-211ENST00000438547 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.05
SEMA4D-211ENST00000438547 CHMP7Q8WUX9 453 aaPredicted RBP14.71□□□□□ -0.05
SEMA4D-211ENST00000438547 CARD11Q9BXL7 1154 aa14.71□□□□□ -0.05
SEMA4D-211ENST00000438547 CCER2I3L3R5 266 aa14.71□□□□□ -0.05
SEMA4D-211ENST00000438547 B4GALNT3Q6L9W6 998 aa14.71□□□□□ -0.05
SEMA4D-211ENST00000438547 ESF1Q9H501 851 aaKnown RBP14.71□□□□□ -0.06
SEMA4D-211ENST00000438547 NOP58Q9Y2X3 529 aaKnown RBP14.7□□□□□ -0.06
SEMA4D-211ENST00000438547 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
SEMA4D-211ENST00000438547 NACADO15069 1562 aa14.69□□□□□ -0.06
SEMA4D-211ENST00000438547 PLEKHD1A6NEE1 506 aa14.68□□□□□ -0.06
SEMA4D-211ENST00000438547 CFDP1Q9UEE9 299 aaPredicted RBP14.68□□□□□ -0.06
SEMA4D-211ENST00000438547 RBM19Q9Y4C8 960 aaKnown RBP14.68□□□□□ -0.06
SEMA4D-211ENST00000438547 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
SEMA4D-211ENST00000438547 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
SEMA4D-211ENST00000438547 KNSTRNQ9Y448 316 aa14.66□□□□□ -0.06
SEMA4D-211ENST00000438547 VPS8Q8N3P4 1428 aa14.66□□□□□ -0.06
SEMA4D-211ENST00000438547 MYH16Q9H6N6 1097 aa14.66□□□□□ -0.06
SEMA4D-211ENST00000438547 LAS1LQ9Y4W2 734 aaKnown RBP14.65□□□□□ -0.06
SEMA4D-211ENST00000438547 CDCA8Q53HL2 280 aa14.64□□□□□ -0.07
SEMA4D-211ENST00000438547 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
SEMA4D-211ENST00000438547 FHAD1B1AJZ9 1412 aa14.62□□□□□ -0.07
SEMA4D-211ENST00000438547 TRIM44Q96DX7 344 aaPredicted RBP14.61□□□□□ -0.07
SEMA4D-211ENST00000438547 SETD5Q9C0A6 1442 aa14.61□□□□□ -0.07
SEMA4D-211ENST00000438547 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
SEMA4D-211ENST00000438547 RGS3P49796 1198 aa14.6□□□□□ -0.07
SEMA4D-211ENST00000438547 KCNH8Q96L42 1107 aa14.59□□□□□ -0.07
SEMA4D-211ENST00000438547 CFAP53Q96M91 514 aa14.59□□□□□ -0.07
SEMA4D-211ENST00000438547 GOLGA6L22H0YM25 854 aa14.58□□□□□ -0.08
SEMA4D-211ENST00000438547 ERICH6BQ5W0A0 696 aa14.58□□□□□ -0.08
SEMA4D-211ENST00000438547 TSHZ2Q9NRE2 1034 aa14.57□□□□□ -0.08
SEMA4D-211ENST00000438547 HSPA5P11021 654 aaKnown RBP14.57□□□□□ -0.08
SEMA4D-211ENST00000438547 CARMIL1Q5VZK9 1371 aa14.56□□□□□ -0.08
SEMA4D-211ENST00000438547 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
SEMA4D-211ENST00000438547 NEUROD2Q15784 382 aa14.55□□□□□ -0.08
SEMA4D-211ENST00000438547 DEKP35659 375 aaKnown RBP14.54□□□□□ -0.08
SEMA4D-211ENST00000438547 CC2D1BQ5T0F9 858 aaKnown RBP14.54□□□□□ -0.08
SEMA4D-211ENST00000438547 FTSJ3Q8IY81 847 aaKnown RBP14.54□□□□□ -0.08
SEMA4D-211ENST00000438547 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
SEMA4D-211ENST00000438547 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
SEMA4D-211ENST00000438547 RAB3GAP2Q9H2M9 1393 aa14.53□□□□□ -0.08
SEMA4D-211ENST00000438547 FRAT1Q92837 279 aaPredicted RBP14.51□□□□□ -0.09
SEMA4D-211ENST00000438547 NCLP19338 710 aaKnown RBP14.51□□□□□ -0.09
SEMA4D-211ENST00000438547 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
SEMA4D-211ENST00000438547 PPP1R15AO75807 674 aaPredicted RBP14.5□□□□□ -0.09
SEMA4D-211ENST00000438547 DCAF11Q8TEB1 546 aa14.5□□□□□ -0.09
SEMA4D-211ENST00000438547 CUX2O14529 1486 aa14.5□□□□□ -0.09
SEMA4D-211ENST00000438547 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
SEMA4D-211ENST00000438547 TMF1P82094 1093 aa14.47□□□□□ -0.09
SEMA4D-211ENST00000438547 ARHGAP35Q9NRY4 1499 aa14.47□□□□□ -0.09
SEMA4D-211ENST00000438547 NUDCQ9Y266 331 aa14.45□□□□□ -0.1
SEMA4D-211ENST00000438547 MAPK8IP3Q9UPT6 1336 aa14.45□□□□□ -0.1
SEMA4D-211ENST00000438547 TNNT2P45379 298 aaPredicted RBP14.43□□□□□ -0.1
SEMA4D-211ENST00000438547 FOXD1Q16676 465 aa14.43□□□□□ -0.1
SEMA4D-211ENST00000438547 NAP1L5Q96NT1 182 aaPredicted RBP14.43□□□□□ -0.1
SEMA4D-211ENST00000438547 PTMAP06454 111 aaKnown RBP14.43□□□□□ -0.1
SEMA4D-211ENST00000438547 MS4A1P11836 297 aa14.42□□□□□ -0.1
SEMA4D-211ENST00000438547 CASC1Q6TDU7 716 aa14.42□□□□□ -0.1
SEMA4D-211ENST00000438547 MPHOSPH9Q99550 1183 aa14.4□□□□□ -0.1
SEMA4D-211ENST00000438547 RCAN3Q9UKA8 241 aa14.4□□□□□ -0.1
SEMA4D-211ENST00000438547 PKD2Q13563 968 aa14.4□□□□□ -0.1
SEMA4D-211ENST00000438547 TCERG1O14776 1098 aaKnown RBP14.39□□□□□ -0.11
SEMA4D-211ENST00000438547 HSP90AB1P08238 724 aaKnown RBP14.38□□□□□ -0.11
SEMA4D-211ENST00000438547 CHMP4BQ9H444 224 aaKnown RBP14.38□□□□□ -0.11
SEMA4D-211ENST00000438547 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
SEMA4D-211ENST00000438547 DHX57Q6P158 1386 aaKnown RBP14.37□□□□□ -0.11
SEMA4D-211ENST00000438547 KTN1Q86UP2 1357 aaKnown RBP14.37□□□□□ -0.11
SEMA4D-211ENST00000438547 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
SEMA4D-211ENST00000438547 RALBP1Q15311 655 aa14.36□□□□□ -0.11
SEMA4D-211ENST00000438547 L3MBTL2Q969R5 705 aa14.35□□□□□ -0.11
SEMA4D-211ENST00000438547 L1TD1Q5T7N2 865 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-211ENST00000438547 HSCBQ8IWL3 235 aa14.34□□□□□ -0.11
SEMA4D-211ENST00000438547 IPO9Q96P70 1041 aaKnown RBP14.34□□□□□ -0.11
SEMA4D-211ENST00000438547 POGKQ9P215 609 aa14.34□□□□□ -0.11
SEMA4D-211ENST00000438547 C14orf37Q86TY3 774 aa14.33□□□□□ -0.11
SEMA4D-211ENST00000438547 EIF4G1Q04637 1599 aaKnown RBP14.33□□□□□ -0.12
SEMA4D-211ENST00000438547 TPRNQ4KMQ1 711 aa14.33□□□□□ -0.12
SEMA4D-211ENST00000438547 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
SEMA4D-211ENST00000438547 ZBTB7CA1YPR0 619 aa14.32□□□□□ -0.12
SEMA4D-211ENST00000438547 MORC1Q86VD1 984 aa14.31□□□□□ -0.12
SEMA4D-211ENST00000438547 SPRYD3Q8NCJ5 442 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms