RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 MRS2Q9HD23 443 aa15□□□□□ -0.01
PTCH1-209ENST00000437951 CHMP4BQ9H444 224 aaKnown RBP14.98□□□□□ -0.01
PTCH1-209ENST00000437951 CFAP44Q96MT7 982 aa14.97□□□□□ -0.01
PTCH1-209ENST00000437951 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
PTCH1-209ENST00000437951 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
PTCH1-209ENST00000437951 DEKP35659 375 aaKnown RBP14.94□□□□□ -0.02
PTCH1-209ENST00000437951 ARID4BQ4LE39 1312 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-209ENST00000437951 PPP4R2Q9NY27 417 aa14.94□□□□□ -0.02
PTCH1-209ENST00000437951 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
PTCH1-209ENST00000437951 A0A0G2JS52 829 aa14.91□□□□□ -0.02
PTCH1-209ENST00000437951 HSP90AB1P08238 724 aaKnown RBP14.89□□□□□ -0.03
PTCH1-209ENST00000437951 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
PTCH1-209ENST00000437951 KIAA2012Q0VF49 1180 aa14.88□□□□□ -0.03
PTCH1-209ENST00000437951 MS4A1P11836 297 aa14.88□□□□□ -0.03
PTCH1-209ENST00000437951 SETQ01105 290 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-209ENST00000437951 RSPH6AQ9H0K4 717 aa14.87□□□□□ -0.03
PTCH1-209ENST00000437951 CALRP27797 417 aaKnown RBP14.86□□□□□ -0.03
PTCH1-209ENST00000437951 PNNQ9H307 717 aaKnown RBP14.86□□□□□ -0.03
PTCH1-209ENST00000437951 GOLGA6L1Q8N7Z2 621 aa14.86□□□□□ -0.03
PTCH1-209ENST00000437951 HSCBQ8IWL3 235 aa14.86□□□□□ -0.03
PTCH1-209ENST00000437951 MIER1Q8N108 512 aa14.85□□□□□ -0.03
PTCH1-209ENST00000437951 LAS1LQ9Y4W2 734 aaKnown RBP14.84□□□□□ -0.03
PTCH1-209ENST00000437951 SALL2Q9Y467 1007 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-209ENST00000437951 PLCB2Q00722 1185 aa14.83□□□□□ -0.04
PTCH1-209ENST00000437951 FTSJ3Q8IY81 847 aaKnown RBP14.82□□□□□ -0.04
PTCH1-209ENST00000437951 GOLGA6L4A6NEF3 574 aa14.81□□□□□ -0.04
PTCH1-209ENST00000437951 DRC7Q8IY82 874 aa14.81□□□□□ -0.04
PTCH1-209ENST00000437951 EIF4G2P78344 907 aaKnown RBP eCLIP14.81□□□□□ -0.044e-7■□□□□ 8.6
PTCH1-209ENST00000437951 IRX6P78412 446 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-209ENST00000437951 CHGAP10645 457 aaKnown RBP14.8□□□□□ -0.04
PTCH1-209ENST00000437951 GBP4Q96PP9 640 aa14.8□□□□□ -0.04
PTCH1-209ENST00000437951 SYAP1Q96A49 352 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-209ENST00000437951 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-209ENST00000437951 HSP90AA2PQ14568 343 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-209ENST00000437951 MCCP23508 829 aa14.77□□□□□ -0.04
PTCH1-209ENST00000437951 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
PTCH1-209ENST00000437951 CDCA8Q53HL2 280 aa14.76□□□□□ -0.05
PTCH1-209ENST00000437951 CFAP53Q96M91 514 aa14.76□□□□□ -0.05
PTCH1-209ENST00000437951 ZNF777Q9ULD5 760 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-209ENST00000437951 SUPT16HQ9Y5B9 1047 aaKnown RBP14.73□□□□□ -0.05
PTCH1-209ENST00000437951 HTATSF1O43719 755 aaKnown RBP14.72□□□□□ -0.05
PTCH1-209ENST00000437951 NOC3LQ8WTT2 800 aaKnown RBP14.72□□□□□ -0.05
PTCH1-209ENST00000437951 TPM4P67936 248 aa14.72□□□□□ -0.05
PTCH1-209ENST00000437951 GOLGA6L3A6NEY3 463 aa14.69□□□□□ -0.06
PTCH1-209ENST00000437951 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-209ENST00000437951 A0A0U1RQG5 324 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-209ENST00000437951 PHF14O94880 888 aa14.67□□□□□ -0.06
PTCH1-209ENST00000437951 FGD1P98174 961 aa14.67□□□□□ -0.06
PTCH1-209ENST00000437951 C14orf37Q86TY3 774 aa14.67□□□□□ -0.06
PTCH1-209ENST00000437951 CSPP1Q1MSJ5 1256 aa14.66□□□□□ -0.06
PTCH1-209ENST00000437951 RBM19Q9Y4C8 960 aaKnown RBP14.65□□□□□ -0.06
PTCH1-209ENST00000437951 GPS2Q13227 327 aa14.64□□□□□ -0.07
PTCH1-209ENST00000437951 NPHP1O15259 732 aa14.63□□□□□ -0.07
PTCH1-209ENST00000437951 CCDC34Q96HJ3 373 aa14.63□□□□□ -0.07
PTCH1-209ENST00000437951 TULP1O00294 542 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-209ENST00000437951 ARID3CA6NKF2 412 aa14.62□□□□□ -0.07
PTCH1-209ENST00000437951 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
PTCH1-209ENST00000437951 KCNJ4P48050 445 aa14.61□□□□□ -0.07
PTCH1-209ENST00000437951 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
PTCH1-209ENST00000437951 RGS3P49796 1198 aa14.6□□□□□ -0.07
PTCH1-209ENST00000437951 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-209ENST00000437951 EEA1Q15075 1411 aa14.6□□□□□ -0.07
PTCH1-209ENST00000437951 TCERG1O14776 1098 aaKnown RBP14.59□□□□□ -0.07
PTCH1-209ENST00000437951 TPRNQ4KMQ1 711 aa14.59□□□□□ -0.07
PTCH1-209ENST00000437951 NOM1Q5C9Z4 860 aaKnown RBP14.59□□□□□ -0.07
PTCH1-209ENST00000437951 ZBTB7CA1YPR0 619 aa14.58□□□□□ -0.08
PTCH1-209ENST00000437951 ABCC9O60706 1549 aa14.58□□□□□ -0.08
PTCH1-209ENST00000437951 MAPK8IP3Q9UPT6 1336 aa14.57□□□□□ -0.08
PTCH1-209ENST00000437951 TEX35Q5T0J7 233 aa14.57□□□□□ -0.08
PTCH1-209ENST00000437951 NUDCQ9Y266 331 aa14.57□□□□□ -0.08
PTCH1-209ENST00000437951 CCER2I3L3R5 266 aa14.56□□□□□ -0.08
PTCH1-209ENST00000437951 MTERF4Q7Z6M4 381 aaKnown RBP14.55□□□□□ -0.08
PTCH1-209ENST00000437951 DDX11L8A8MPP1 907 aa14.55□□□□□ -0.08
PTCH1-209ENST00000437951 VSIG10Q8N0Z9 540 aa14.55□□□□□ -0.08
PTCH1-209ENST00000437951 IPO9Q96P70 1041 aaKnown RBP14.55□□□□□ -0.08
PTCH1-209ENST00000437951 GNL2Q13823 731 aaKnown RBP14.53□□□□□ -0.08
PTCH1-209ENST00000437951 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.08
PTCH1-209ENST00000437951 TSPY4P0CV99 314 aa14.52□□□□□ -0.08
PTCH1-209ENST00000437951 TSPY10P0CW01 314 aa14.52□□□□□ -0.08
PTCH1-209ENST00000437951 CCDC70Q6NSX1 233 aa14.52□□□□□ -0.09
PTCH1-209ENST00000437951 PPP1R15AO75807 674 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-209ENST00000437951 OS9Q13438 667 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-209ENST00000437951 ZNF771Q7L3S4 317 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-209ENST00000437951 P3H3Q8IVL6 736 aa14.51□□□□□ -0.09
PTCH1-209ENST00000437951 SKOR2Q2VWA4 1001 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-209ENST00000437951 ZCCHC6Q5VYS8 1495 aaKnown RBP14.51□□□□□ -0.09
PTCH1-209ENST00000437951 MAP7D2Q96T17 732 aa14.5□□□□□ -0.09
PTCH1-209ENST00000437951 PLEKHG5O94827 1062 aa14.5□□□□□ -0.09
PTCH1-209ENST00000437951 TPM3P06753 285 aa14.5□□□□□ -0.09
PTCH1-209ENST00000437951 CALD1Q05682 793 aaKnown RBP14.5□□□□□ -0.09
PTCH1-209ENST00000437951 MTUS2Q5JR59 1369 aa14.5□□□□□ -0.09
PTCH1-209ENST00000437951 B4GALNT3Q6L9W6 998 aa14.49□□□□□ -0.09
PTCH1-209ENST00000437951 KIAA1211Q6ZU35 1233 aa14.49□□□□□ -0.09
PTCH1-209ENST00000437951 KDM2AQ9Y2K7 1162 aa14.49□□□□□ -0.09
PTCH1-209ENST00000437951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.09
PTCH1-209ENST00000437951 NAP1L2Q9ULW6 460 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-209ENST00000437951 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
PTCH1-209ENST00000437951 APPP05067 770 aa14.46□□□□□ -0.09
PTCH1-209ENST00000437951 ARID3AQ99856 593 aa14.45□□□□□ -0.1
PTCH1-209ENST00000437951 FRAT1Q92837 279 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms