RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 RUSC2Q8N2Y8 1516 aa32.58■■■□□ 2.81
UBXN1-203ENST00000436354 NPM1P06748 294 aaKnown RBP eCLIP32.5■■■□□ 2.79
UBXN1-203ENST00000436354 ABCC10Q5T3U5 1492 aa32.45■■■□□ 2.79
UBXN1-203ENST00000436354 FAM69CQ0P6D2 419 aa32.44■■■□□ 2.78
UBXN1-203ENST00000436354 MAPKBP1O60336 1514 aa32.42■■■□□ 2.78
UBXN1-203ENST00000436354 KIAA0586Q9BVV6 1533 aa32.4■■■□□ 2.78
UBXN1-203ENST00000436354 ADCY10Q96PN6 1610 aa32.39■■■□□ 2.78
UBXN1-203ENST00000436354 IGF1RP08069 1367 aa32.36■■■□□ 2.77
UBXN1-203ENST00000436354 KIF27Q86VH2 1401 aa32.35■■■□□ 2.77
UBXN1-203ENST00000436354 CUL7Q14999 1698 aa32.35■■■□□ 2.77
UBXN1-203ENST00000436354 DIP2BQ9P265 1576 aa32.35■■■□□ 2.77
UBXN1-203ENST00000436354 KDM6BO15054 1643 aa32.18■■■□□ 2.74
UBXN1-203ENST00000436354 PTPRGP23470 1445 aa32.17■■■□□ 2.74
UBXN1-203ENST00000436354 CARMIL1Q5VZK9 1371 aa32.16■■■□□ 2.74
UBXN1-203ENST00000436354 TSPOAP1O95153 1857 aa32.14■■■□□ 2.74
UBXN1-203ENST00000436354 CARMIL2Q6F5E8 1435 aa32.11■■■□□ 2.73
UBXN1-203ENST00000436354 TNIKQ9UKE5 1360 aa32.07■■■□□ 2.73
UBXN1-203ENST00000436354 TTBK1Q5TCY1 1321 aaPredicted RBP32.07■■■□□ 2.72
UBXN1-203ENST00000436354 ABCC2Q92887 1545 aa32.04■■■□□ 2.72
UBXN1-203ENST00000436354 IQGAP2Q13576 1575 aa32.03■■■□□ 2.72
UBXN1-203ENST00000436354 KDM4FA0A1W2PPD8 638 aa31.99■■■□□ 2.71
UBXN1-203ENST00000436354 ASXL2Q76L83 1435 aa31.97■■■□□ 2.71
UBXN1-203ENST00000436354 PLB1Q6P1J6 1458 aa31.97■■■□□ 2.71
UBXN1-203ENST00000436354 UHRF1BP1LA0JNW5 1464 aa31.95■■■□□ 2.7
UBXN1-203ENST00000436354 GLI2P10070 1586 aa31.93■■■□□ 2.7
UBXN1-203ENST00000436354 UACAQ9BZF9 1416 aa31.91■■■□□ 2.7
UBXN1-203ENST00000436354 DISP1Q96F81 1524 aa31.89■■■□□ 2.7
UBXN1-203ENST00000436354 PPRC1Q5VV67 1664 aaKnown RBP31.87■■■□□ 2.69
UBXN1-203ENST00000436354 RAPGEF2Q9Y4G8 1499 aa31.82■■■□□ 2.68
UBXN1-203ENST00000436354 UGGT2Q9NYU1 1516 aa31.81■■■□□ 2.68
UBXN1-203ENST00000436354 KDM5BQ9UGL1 1544 aa31.8■■■□□ 2.68
UBXN1-203ENST00000436354 EPRSP07814 1512 aaKnown RBP31.76■■■□□ 2.68
UBXN1-203ENST00000436354 MAP3K4Q9Y6R4 1608 aa31.75■■■□□ 2.67
UBXN1-203ENST00000436354 KIAA0556O60303 1618 aa31.74■■■□□ 2.67
UBXN1-203ENST00000436354 ZCCHC11Q5TAX3 1644 aaKnown RBP31.73■■■□□ 2.67
UBXN1-203ENST00000436354 TEX14Q8IWB6 1497 aa31.7■■■□□ 2.66
UBXN1-203ENST00000436354 COL17A1Q9UMD9 1497 aaPredicted RBP31.67■■■□□ 2.66
UBXN1-203ENST00000436354 ADGRL1O94910 1474 aa31.66■■■□□ 2.66
UBXN1-203ENST00000436354 WDR7Q9Y4E6 1490 aa31.6■■■□□ 2.65
UBXN1-203ENST00000436354 CTTNBP2Q8WZ74 1663 aa31.6■■■□□ 2.65
UBXN1-203ENST00000436354 GOLGA3Q08378 1498 aa31.55■■■□□ 2.64
UBXN1-203ENST00000436354 ABCA8O94911 1581 aa31.47■■■□□ 2.63
UBXN1-203ENST00000436354 CFAP43Q8NDM7 1665 aa31.46■■■□□ 2.63
UBXN1-203ENST00000436354 CD109Q6YHK3 1445 aa31.45■■■□□ 2.63
UBXN1-203ENST00000436354 MAGI3Q5TCQ9 1506 aa31.44■■■□□ 2.62
UBXN1-203ENST00000436354 KCNH8Q96L42 1107 aa31.43■■■□□ 2.62
UBXN1-203ENST00000436354 PRXQ9BXM0 1461 aa31.4■■■□□ 2.62
UBXN1-203ENST00000436354 ILDR1Q86SU0 546 aaPredicted RBP31.39■■■□□ 2.62
UBXN1-203ENST00000436354 FAM9AQ8IZU1 332 aaPredicted RBP31.34■■■□□ 2.61
UBXN1-203ENST00000436354 HECW2Q9P2P5 1572 aa31.34■■■□□ 2.61
UBXN1-203ENST00000436354 ARAP3Q8WWN8 1544 aa31.22■■■□□ 2.59
UBXN1-203ENST00000436354 ATP10BO94823 1461 aa31.21■■■□□ 2.59
UBXN1-203ENST00000436354 P3H3Q8IVL6 736 aa31.2■■■□□ 2.59
UBXN1-203ENST00000436354 KIF21BO75037 1637 aa31.2■■■□□ 2.58
UBXN1-203ENST00000436354 ARID3CA6NKF2 412 aa31.19■■■□□ 2.58
UBXN1-203ENST00000436354 PHLDB1Q86UU1 1377 aa31.15■■■□□ 2.58
UBXN1-203ENST00000436354 ABCA9Q8IUA7 1624 aa31.14■■■□□ 2.58
UBXN1-203ENST00000436354 SAMD9Q5K651 1589 aa31.11■■■□□ 2.57
UBXN1-203ENST00000436354 CSRNP3Q8WYN3 585 aa31.08■■■□□ 2.57
UBXN1-203ENST00000436354 RAPGEF6Q8TEU7 1601 aa31.07■■■□□ 2.56
UBXN1-203ENST00000436354 NEO1Q92859 1461 aa31.03■■■□□ 2.56
UBXN1-203ENST00000436354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.03■■■□□ 2.56
UBXN1-203ENST00000436354 HNRNPUL2Q1KMD3 747 aaKnown RBP31.03■■■□□ 2.56
UBXN1-203ENST00000436354 RAPGEF3O95398 923 aa31■■■□□ 2.55
UBXN1-203ENST00000436354 ADAMTSL3P82987 1691 aa30.97■■■□□ 2.55
UBXN1-203ENST00000436354 PTPRMP28827 1452 aa30.95■■■□□ 2.54
UBXN1-203ENST00000436354 NUP153P49790 1475 aaKnown RBP30.95■■■□□ 2.54
UBXN1-203ENST00000436354 FRMPD1Q5SYB0 1578 aa30.9■■■□□ 2.54
UBXN1-203ENST00000436354 EEA1Q15075 1411 aa30.89■■■□□ 2.53
UBXN1-203ENST00000436354 RANGAP1P46060 587 aaPredicted RBP30.88■■■□□ 2.53
UBXN1-203ENST00000436354 BCORL1Q5H9F3 1711 aa30.87■■■□□ 2.53
UBXN1-203ENST00000436354 PLEKHD1A6NEE1 506 aa30.86■■■□□ 2.53
UBXN1-203ENST00000436354 ARID4BQ4LE39 1312 aaPredicted RBP30.86■■■□□ 2.53
UBXN1-203ENST00000436354 FHOD3Q2V2M9 1422 aa30.86■■■□□ 2.53
UBXN1-203ENST00000436354 MADDQ8WXG6 1647 aa30.8■■■□□ 2.52
UBXN1-203ENST00000436354 DENND4BO75064 1496 aaPredicted RBP30.8■■■□□ 2.52
UBXN1-203ENST00000436354 CFAP74Q9C0B2 1584 aa30.78■■■□□ 2.52
UBXN1-203ENST00000436354 RICTORQ6R327 1708 aa30.78■■■□□ 2.52
UBXN1-203ENST00000436354 ARHGEF40Q8TER5 1519 aa30.78■■■□□ 2.52
UBXN1-203ENST00000436354 AKNAQ7Z591 1439 aa30.77■■■□□ 2.52
UBXN1-203ENST00000436354 FBXO41Q8TF61 875 aa30.77■■■□□ 2.52
UBXN1-203ENST00000436354 FANCAO15360 1455 aa30.76■■■□□ 2.51
UBXN1-203ENST00000436354 EFCAB5A4FU69 1503 aa30.74■■■□□ 2.51
UBXN1-203ENST00000436354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.74■■■□□ 2.51
UBXN1-203ENST00000436354 PCF11O94913 1555 aaKnown RBP30.73■■■□□ 2.51
UBXN1-203ENST00000436354 RIMS1Q86UR5 1692 aaKnown RBP30.69■■■□□ 2.5
UBXN1-203ENST00000436354 TTC37Q6PGP7 1564 aa30.68■■■□□ 2.5
UBXN1-203ENST00000436354 LMTK3Q96Q04 1460 aa30.68■■■□□ 2.5
UBXN1-203ENST00000436354 ZMYM4Q5VZL5 1548 aa30.67■■■□□ 2.5
UBXN1-203ENST00000436354 POGZQ7Z3K3 1410 aa30.65■■■□□ 2.5
UBXN1-203ENST00000436354 ZFYVE16Q7Z3T8 1539 aa30.63■■■□□ 2.49
UBXN1-203ENST00000436354 MAGI2Q86UL8 1455 aa30.62■■■□□ 2.49
UBXN1-203ENST00000436354 CDK13Q14004 1512 aaKnown RBP30.59■■■□□ 2.49
UBXN1-203ENST00000436354 YEATS2Q9ULM3 1422 aa30.58■■■□□ 2.49
UBXN1-203ENST00000436354 PLCH2O75038 1416 aa30.56■■■□□ 2.48
UBXN1-203ENST00000436354 HECW1Q76N89 1606 aa30.55■■■□□ 2.48
UBXN1-203ENST00000436354 SIGLEC1Q9BZZ2 1709 aa30.54■■■□□ 2.48
UBXN1-203ENST00000436354 SCAPERQ9BY12 1400 aa30.54■■■□□ 2.48
UBXN1-203ENST00000436354 PLPPR3Q6T4P5 718 aa30.53■■■□□ 2.48
UBXN1-203ENST00000436354 HSPA2P54652 639 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms