RNA–Protein interactions for RNA: ENST00000435634.2

EXOSC6-201, Transcript of exosome component 6, humanhuman

APPRIS P1 BASIC

Gene EXOSC6, Length 5,153 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6-201ENST00000435634 WRNQ14191 1432 aaPredicted RBP eCLIP28.87■■■□□ 2.21
EXOSC6-201ENST00000435634 PPP4R2Q9NY27 417 aa28.83■■■□□ 2.21
EXOSC6-201ENST00000435634 TSPY4P0CV99 314 aa28.81■■■□□ 2.2
EXOSC6-201ENST00000435634 TSPY10P0CW01 314 aa28.81■■■□□ 2.2
EXOSC6-201ENST00000435634 KDM2AQ9Y2K7 1162 aa28.8■■■□□ 2.2
EXOSC6-201ENST00000435634 RB1CC1Q8TDY2 1594 aa28.8■■■□□ 2.2
EXOSC6-201ENST00000435634 RRP7BPQ9NSQ0 103 aa28.78■■■□□ 2.2
EXOSC6-201ENST00000435634 BECN1Q14457 450 aa28.75■■■□□ 2.19
EXOSC6-201ENST00000435634 PPM1GO15355 546 aaPredicted RBP28.74■■■□□ 2.19
EXOSC6-201ENST00000435634 CHGAP10645 457 aaKnown RBP28.71■■■□□ 2.19
EXOSC6-201ENST00000435634 ARXQ96QS3 562 aa28.7■■■□□ 2.18
EXOSC6-201ENST00000435634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.68■■■□□ 2.18
EXOSC6-201ENST00000435634 TIMELESSQ9UNS1 1208 aa28.66■■■□□ 2.18
EXOSC6-201ENST00000435634 NOP58Q9Y2X3 529 aaKnown RBP28.65■■■□□ 2.18
EXOSC6-201ENST00000435634 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
EXOSC6-201ENST00000435634 CCER2I3L3R5 266 aa28.62■■■□□ 2.17
EXOSC6-201ENST00000435634 SIN3AQ96ST3 1273 aa28.62■■■□□ 2.17
EXOSC6-201ENST00000435634 CCNB3Q8WWL7 1395 aa28.59■■■□□ 2.17
EXOSC6-201ENST00000435634 RBM19Q9Y4C8 960 aaKnown RBP28.52■■■□□ 2.16
EXOSC6-201ENST00000435634 TRIM44Q96DX7 344 aaPredicted RBP28.51■■■□□ 2.15
EXOSC6-201ENST00000435634 ERICH6BQ5W0A0 696 aa28.5■■■□□ 2.15
EXOSC6-201ENST00000435634 MYH16Q9H6N6 1097 aa28.5■■■□□ 2.15
EXOSC6-201ENST00000435634 NACADO15069 1562 aa28.47■■■□□ 2.15
EXOSC6-201ENST00000435634 STAG3Q9UJ98 1225 aa28.47■■■□□ 2.15
EXOSC6-201ENST00000435634 B4GALNT3Q6L9W6 998 aa28.45■■■□□ 2.15
EXOSC6-201ENST00000435634 GOLGA6L22H0YM25 854 aa28.44■■■□□ 2.14
EXOSC6-201ENST00000435634 CARD11Q9BXL7 1154 aa28.44■■■□□ 2.14
EXOSC6-201ENST00000435634 BAZ1AQ9NRL2 1556 aaPredicted RBP28.44■■■□□ 2.14
EXOSC6-201ENST00000435634 VPS8Q8N3P4 1428 aa28.43■■■□□ 2.14
EXOSC6-201ENST00000435634 CDCA8Q53HL2 280 aa28.43■■■□□ 2.14
EXOSC6-201ENST00000435634 LAS1LQ9Y4W2 734 aaKnown RBP28.42■■■□□ 2.14
EXOSC6-201ENST00000435634 SOGA1O94964 1423 aa28.41■■■□□ 2.14
EXOSC6-201ENST00000435634 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
EXOSC6-201ENST00000435634 KNSTRNQ9Y448 316 aa28.39■■■□□ 2.13
EXOSC6-201ENST00000435634 FHAD1B1AJZ9 1412 aa28.38■■■□□ 2.13
EXOSC6-201ENST00000435634 SENP3-EIF4A1A0A087X0R7 540 aa28.36■■■□□ 2.13
EXOSC6-201ENST00000435634 ESF1Q9H501 851 aaKnown RBP28.36■■■□□ 2.13
EXOSC6-201ENST00000435634 SETD5Q9C0A6 1442 aa28.34■■■□□ 2.13
EXOSC6-201ENST00000435634 DEKP35659 375 aaKnown RBP28.32■■■□□ 2.12
EXOSC6-201ENST00000435634 RGL3Q3MIN7 710 aa28.32■■■□□ 2.12
EXOSC6-201ENST00000435634 PLEKHD1A6NEE1 506 aa28.31■■■□□ 2.12
EXOSC6-201ENST00000435634 TSHZ2Q9NRE2 1034 aa28.31■■■□□ 2.12
EXOSC6-201ENST00000435634 CFDP1Q9UEE9 299 aaPredicted RBP28.31■■■□□ 2.12
EXOSC6-201ENST00000435634 CFAP53Q96M91 514 aa28.3■■■□□ 2.12
EXOSC6-201ENST00000435634 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
EXOSC6-201ENST00000435634 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
EXOSC6-201ENST00000435634 NCLP19338 710 aaKnown RBP28.28■■■□□ 2.12
EXOSC6-201ENST00000435634 NPM1P06748 294 aaKnown RBP eCLIP28.26■■■□□ 2.11
EXOSC6-201ENST00000435634 RTN4Q9NQC3 1192 aaKnown RBP28.25■■■□□ 2.11
EXOSC6-201ENST00000435634 RGS3P49796 1198 aa28.24■■■□□ 2.11
EXOSC6-201ENST00000435634 FTSJ3Q8IY81 847 aaKnown RBP28.2■■■□□ 2.1
EXOSC6-201ENST00000435634 HSPA5P11021 654 aaKnown RBP28.17■■■□□ 2.1
EXOSC6-201ENST00000435634 NAP1L5Q96NT1 182 aaPredicted RBP28.14■■■□□ 2.09
EXOSC6-201ENST00000435634 KANK4Q5T7N3 995 aaPredicted RBP28.12■■■□□ 2.09
EXOSC6-201ENST00000435634 RAB3GAP2Q9H2M9 1393 aa28.11■■■□□ 2.09
EXOSC6-201ENST00000435634 CARMIL1Q5VZK9 1371 aa28.1■■■□□ 2.09
EXOSC6-201ENST00000435634 PTMAP06454 111 aaKnown RBP28.09■■■□□ 2.09
EXOSC6-201ENST00000435634 MS4A1P11836 297 aa28.09■■■□□ 2.09
EXOSC6-201ENST00000435634 CASC1Q6TDU7 716 aa28.09■■■□□ 2.09
EXOSC6-201ENST00000435634 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
EXOSC6-201ENST00000435634 ARHGAP35Q9NRY4 1499 aa28.08■■■□□ 2.09
EXOSC6-201ENST00000435634 TNNT2P45379 298 aaPredicted RBP28.07■■■□□ 2.08
EXOSC6-201ENST00000435634 CC2D1BQ5T0F9 858 aaKnown RBP28.06■■■□□ 2.08
EXOSC6-201ENST00000435634 FRAT1Q92837 279 aaPredicted RBP28.05■■■□□ 2.08
EXOSC6-201ENST00000435634 L1TD1Q5T7N2 865 aaKnown RBP28.05■■■□□ 2.08
EXOSC6-201ENST00000435634 NEUROD2Q15784 382 aa28.04■■■□□ 2.08
EXOSC6-201ENST00000435634 CHMP4BQ9H444 224 aaKnown RBP28.04■■■□□ 2.08
EXOSC6-201ENST00000435634 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
EXOSC6-201ENST00000435634 PPP1R15AO75807 674 aaPredicted RBP28.03■■■□□ 2.08
EXOSC6-201ENST00000435634 TCERG1O14776 1098 aaKnown RBP28.02■■■□□ 2.08
EXOSC6-201ENST00000435634 TMF1P82094 1093 aa28.02■■■□□ 2.08
EXOSC6-201ENST00000435634 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
EXOSC6-201ENST00000435634 NUDCQ9Y266 331 aa28.02■■■□□ 2.08
EXOSC6-201ENST00000435634 MAPK8IP3Q9UPT6 1336 aa28.01■■■□□ 2.07
EXOSC6-201ENST00000435634 CUX2O14529 1486 aa27.98■■■□□ 2.07
EXOSC6-201ENST00000435634 DNTTIP2Q5QJE6 756 aaKnown RBP27.97■■■□□ 2.07
EXOSC6-201ENST00000435634 KCNH8Q96L42 1107 aa27.97■■■□□ 2.07
EXOSC6-201ENST00000435634 DCAF11Q8TEB1 546 aa27.96■■■□□ 2.07
EXOSC6-201ENST00000435634 HSP90AB1P08238 724 aaKnown RBP27.96■■■□□ 2.07
EXOSC6-201ENST00000435634 RCAN3Q9UKA8 241 aa27.93■■■□□ 2.06
EXOSC6-201ENST00000435634 HSCBQ8IWL3 235 aa27.92■■■□□ 2.06
EXOSC6-201ENST00000435634 IPO9Q96P70 1041 aaKnown RBP27.92■■■□□ 2.06
EXOSC6-201ENST00000435634 KTN1Q86UP2 1357 aaKnown RBP27.91■■■□□ 2.06
EXOSC6-201ENST00000435634 RALBP1Q15311 655 aa27.89■■■□□ 2.05
EXOSC6-201ENST00000435634 DHX57Q6P158 1386 aaKnown RBP27.85■■■□□ 2.05
EXOSC6-201ENST00000435634 PNNQ9H307 717 aaKnown RBP27.81■■■□□ 2.04
EXOSC6-201ENST00000435634 MPHOSPH9Q99550 1183 aa27.81■■■□□ 2.04
EXOSC6-201ENST00000435634 ZRSR1Q15695 479 aaKnown RBP27.8■■■□□ 2.04
EXOSC6-201ENST00000435634 FMN1Q68DA7 1419 aa27.8■■■□□ 2.04
EXOSC6-201ENST00000435634 PKD2Q13563 968 aa27.77■■■□□ 2.04
EXOSC6-201ENST00000435634 CFAP44Q96MT7 982 aa27.75■■■□□ 2.03
EXOSC6-201ENST00000435634 U2SURPO15042 1029 aaKnown RBP27.74■■■□□ 2.03
EXOSC6-201ENST00000435634 MSNP26038 577 aaKnown RBP27.74■■■□□ 2.03
EXOSC6-201ENST00000435634 PDE3BQ13370 1112 aa27.73■■■□□ 2.03
EXOSC6-201ENST00000435634 FOXD1Q16676 465 aa27.72■■■□□ 2.03
EXOSC6-201ENST00000435634 TOP2AP11388 1531 aaKnown RBP27.71■■■□□ 2.03
EXOSC6-201ENST00000435634 PTMSP20962 102 aa27.7■■■□□ 2.02
EXOSC6-201ENST00000435634 SENP3Q9H4L4 574 aaPredicted RBP27.69■■■□□ 2.02
EXOSC6-201ENST00000435634 USP35Q9P2H5 1018 aa27.69■■■□□ 2.02
EXOSC6-201ENST00000435634 EIF4G1Q04637 1599 aaKnown RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms