RNA–Protein interactions for RNA: ENST00000435630.5

CNOT10-205, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 1 (best)

Gene CNOT10, Length 2,290 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-205ENST00000435630 CCER1Q8TC90 406 aaPredicted RBP19.36■□□□□ 0.69
CNOT10-205ENST00000435630 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
CNOT10-205ENST00000435630 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
CNOT10-205ENST00000435630 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.68
CNOT10-205ENST00000435630 NUP160Q12769 1436 aa19.28■□□□□ 0.68
CNOT10-205ENST00000435630 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
CNOT10-205ENST00000435630 CLASP1Q7Z460 1538 aa19.24■□□□□ 0.67
CNOT10-205ENST00000435630 CUL7Q14999 1698 aa19.24■□□□□ 0.67
CNOT10-205ENST00000435630 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
CNOT10-205ENST00000435630 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
CNOT10-205ENST00000435630 KIF21BO75037 1637 aa19.19■□□□□ 0.66
CNOT10-205ENST00000435630 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
CNOT10-205ENST00000435630 ARHGEF11O15085 1522 aa19.18■□□□□ 0.66
CNOT10-205ENST00000435630 PRXQ9BXM0 1461 aa19.17■□□□□ 0.66
CNOT10-205ENST00000435630 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
CNOT10-205ENST00000435630 ACIN1Q9UKV3 1341 aaKnown RBP19.14■□□□□ 0.66
CNOT10-205ENST00000435630 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
CNOT10-205ENST00000435630 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
CNOT10-205ENST00000435630 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
CNOT10-205ENST00000435630 DIEXFQ68CQ4 756 aaKnown RBP19.12■□□□□ 0.65
CNOT10-205ENST00000435630 KIAA0586Q9BVV6 1533 aa19.12■□□□□ 0.65
CNOT10-205ENST00000435630 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
CNOT10-205ENST00000435630 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
CNOT10-205ENST00000435630 CYB5RLQ6IPT4 315 aa19.11■□□□□ 0.65
CNOT10-205ENST00000435630 PRG4Q92954 1404 aaPredicted RBP19.07■□□□□ 0.64
CNOT10-205ENST00000435630 NEUROD1Q13562 356 aa19.06■□□□□ 0.64
CNOT10-205ENST00000435630 ARAP1Q96P48 1450 aa19.04■□□□□ 0.64
CNOT10-205ENST00000435630 ERCC6L2Q5T890 1561 aa19.04■□□□□ 0.64
CNOT10-205ENST00000435630 SHROOM2Q13796 1616 aa19.04■□□□□ 0.64
CNOT10-205ENST00000435630 CENPBP07199 599 aaPredicted RBP19.01■□□□□ 0.63
CNOT10-205ENST00000435630 CLIP1P30622 1438 aa18.99■□□□□ 0.63
CNOT10-205ENST00000435630 VPS8Q8N3P4 1428 aa18.98■□□□□ 0.63
CNOT10-205ENST00000435630 IQGAP2Q13576 1575 aa18.98■□□□□ 0.63
CNOT10-205ENST00000435630 ZNF316A6NFI3 1004 aaPredicted RBP18.95■□□□□ 0.62
CNOT10-205ENST00000435630 CARMIL2Q6F5E8 1435 aa18.91■□□□□ 0.62
CNOT10-205ENST00000435630 UGGT2Q9NYU1 1516 aa18.9■□□□□ 0.62
CNOT10-205ENST00000435630 DISP1Q96F81 1524 aa18.9■□□□□ 0.62
CNOT10-205ENST00000435630 GTF3C3Q9Y5Q9 886 aa18.88■□□□□ 0.61
CNOT10-205ENST00000435630 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
CNOT10-205ENST00000435630 PTPRGP23470 1445 aa18.86■□□□□ 0.61
CNOT10-205ENST00000435630 CTTNBP2Q8WZ74 1663 aa18.85■□□□□ 0.61
CNOT10-205ENST00000435630 P3H3Q8IVL6 736 aa18.83■□□□□ 0.6
CNOT10-205ENST00000435630 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
CNOT10-205ENST00000435630 KIAA0556O60303 1618 aa18.79■□□□□ 0.6
CNOT10-205ENST00000435630 APLP2Q06481 763 aa18.76■□□□□ 0.59
CNOT10-205ENST00000435630 UACAQ9BZF9 1416 aa18.71■□□□□ 0.59
CNOT10-205ENST00000435630 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
CNOT10-205ENST00000435630 SAMD9Q5K651 1589 aa18.7■□□□□ 0.58
CNOT10-205ENST00000435630 PLB1Q6P1J6 1458 aa18.69■□□□□ 0.58
CNOT10-205ENST00000435630 ADCY10Q96PN6 1610 aa18.68■□□□□ 0.58
CNOT10-205ENST00000435630 FHOD3Q2V2M9 1422 aa18.68■□□□□ 0.58
CNOT10-205ENST00000435630 CLSPNQ9HAW4 1339 aa18.68■□□□□ 0.58
CNOT10-205ENST00000435630 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
CNOT10-205ENST00000435630 MIER1Q8N108 512 aa18.66■□□□□ 0.58
CNOT10-205ENST00000435630 UHRF1BP1LA0JNW5 1464 aa18.66■□□□□ 0.58
CNOT10-205ENST00000435630 ARHGAP35Q9NRY4 1499 aa18.64■□□□□ 0.57
CNOT10-205ENST00000435630 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.57
CNOT10-205ENST00000435630 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
CNOT10-205ENST00000435630 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
CNOT10-205ENST00000435630 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
CNOT10-205ENST00000435630 ABCA8O94911 1581 aa18.59■□□□□ 0.57
CNOT10-205ENST00000435630 ARID3CA6NKF2 412 aa18.59■□□□□ 0.57
CNOT10-205ENST00000435630 RRBP1Q9P2E9 1410 aaKnown RBP18.59■□□□□ 0.57
CNOT10-205ENST00000435630 KDM5BQ9UGL1 1544 aa18.58■□□□□ 0.57
CNOT10-205ENST00000435630 MAPKBP1O60336 1514 aa18.55■□□□□ 0.56
CNOT10-205ENST00000435630 FMN1Q68DA7 1419 aa18.53■□□□□ 0.56
CNOT10-205ENST00000435630 ASXL2Q76L83 1435 aa18.53■□□□□ 0.56
CNOT10-205ENST00000435630 FAM69CQ0P6D2 419 aa18.52■□□□□ 0.55
CNOT10-205ENST00000435630 ATP10BO94823 1461 aa18.51■□□□□ 0.55
CNOT10-205ENST00000435630 NUP153P49790 1475 aaKnown RBP18.51■□□□□ 0.55
CNOT10-205ENST00000435630 KANK4Q5T7N3 995 aaPredicted RBP18.51■□□□□ 0.55
CNOT10-205ENST00000435630 ATP1B4Q9UN42 357 aaPredicted RBP18.5■□□□□ 0.55
CNOT10-205ENST00000435630 ABCC10Q5T3U5 1492 aa18.49■□□□□ 0.55
CNOT10-205ENST00000435630 RAPGEF6Q8TEU7 1601 aa18.49■□□□□ 0.55
CNOT10-205ENST00000435630 ZCCHC11Q5TAX3 1644 aaKnown RBP18.48■□□□□ 0.55
CNOT10-205ENST00000435630 KCNH8Q96L42 1107 aa18.44■□□□□ 0.54
CNOT10-205ENST00000435630 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
CNOT10-205ENST00000435630 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
CNOT10-205ENST00000435630 MYT1Q01538 1121 aa18.42■□□□□ 0.54
CNOT10-205ENST00000435630 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
CNOT10-205ENST00000435630 DIP2BQ9P265 1576 aa18.41■□□□□ 0.54
CNOT10-205ENST00000435630 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
CNOT10-205ENST00000435630 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
CNOT10-205ENST00000435630 TIAM1Q13009 1591 aa18.4■□□□□ 0.54
CNOT10-205ENST00000435630 PLEKHD1A6NEE1 506 aa18.39■□□□□ 0.54
CNOT10-205ENST00000435630 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
CNOT10-205ENST00000435630 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
CNOT10-205ENST00000435630 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
CNOT10-205ENST00000435630 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
CNOT10-205ENST00000435630 GLI2P10070 1586 aa18.33■□□□□ 0.52
CNOT10-205ENST00000435630 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.52
CNOT10-205ENST00000435630 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
CNOT10-205ENST00000435630 CFAP43Q8NDM7 1665 aa18.32■□□□□ 0.52
CNOT10-205ENST00000435630 CD109Q6YHK3 1445 aa18.28■□□□□ 0.52
CNOT10-205ENST00000435630 RAB3GAP2Q9H2M9 1393 aa18.28■□□□□ 0.52
CNOT10-205ENST00000435630 CCDC18Q5T9S5 1454 aa18.27■□□□□ 0.52
CNOT10-205ENST00000435630 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
CNOT10-205ENST00000435630 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
CNOT10-205ENST00000435630 MAP3K4Q9Y6R4 1608 aa18.23■□□□□ 0.51
CNOT10-205ENST00000435630 LRRIQ1Q96JM4 1722 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms