RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 NPM1P06748 294 aaKnown RBP eCLIP23.51■■□□□ 1.35
CDC42EP1-204ENST00000434728 KIF13AQ9H1H9 1805 aa23.49■■□□□ 1.35
CDC42EP1-204ENST00000434728 KIF27Q86VH2 1401 aa23.46■■□□□ 1.35
CDC42EP1-204ENST00000434728 CUL7Q14999 1698 aa23.45■■□□□ 1.34
CDC42EP1-204ENST00000434728 KIAA0586Q9BVV6 1533 aa23.4■■□□□ 1.34
CDC42EP1-204ENST00000434728 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
CDC42EP1-204ENST00000434728 IGF1RP08069 1367 aa23.39■■□□□ 1.33
CDC42EP1-204ENST00000434728 ADCY10Q96PN6 1610 aa23.37■■□□□ 1.33
CDC42EP1-204ENST00000434728 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
CDC42EP1-204ENST00000434728 MAPKBP1O60336 1514 aa23.35■■□□□ 1.33
CDC42EP1-204ENST00000434728 TTBK1Q5TCY1 1321 aaPredicted RBP23.32■■□□□ 1.32
CDC42EP1-204ENST00000434728 DIP2BQ9P265 1576 aa23.31■■□□□ 1.32
CDC42EP1-204ENST00000434728 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
CDC42EP1-204ENST00000434728 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
CDC42EP1-204ENST00000434728 PTPRGP23470 1445 aa23.25■■□□□ 1.31
CDC42EP1-204ENST00000434728 TSPOAP1O95153 1857 aa23.25■■□□□ 1.31
CDC42EP1-204ENST00000434728 IQGAP2Q13576 1575 aa23.21■■□□□ 1.31
CDC42EP1-204ENST00000434728 KDM6BO15054 1643 aa23.21■■□□□ 1.31
CDC42EP1-204ENST00000434728 TNIKQ9UKE5 1360 aa23.19■■□□□ 1.3
CDC42EP1-204ENST00000434728 ABCC2Q92887 1545 aa23.13■■□□□ 1.29
CDC42EP1-204ENST00000434728 ASXL2Q76L83 1435 aa23.08■■□□□ 1.29
CDC42EP1-204ENST00000434728 PLB1Q6P1J6 1458 aa23.08■■□□□ 1.29
CDC42EP1-204ENST00000434728 RAPGEF2Q9Y4G8 1499 aa23.06■■□□□ 1.28
CDC42EP1-204ENST00000434728 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
CDC42EP1-204ENST00000434728 UHRF1BP1LA0JNW5 1464 aa23.04■■□□□ 1.28
CDC42EP1-204ENST00000434728 DISP1Q96F81 1524 aa23.03■■□□□ 1.28
CDC42EP1-204ENST00000434728 UGGT2Q9NYU1 1516 aa22.99■■□□□ 1.27
CDC42EP1-204ENST00000434728 GLI2P10070 1586 aa22.99■■□□□ 1.27
CDC42EP1-204ENST00000434728 KIAA0556O60303 1618 aa22.97■■□□□ 1.27
CDC42EP1-204ENST00000434728 PPRC1Q5VV67 1664 aaKnown RBP22.94■■□□□ 1.26
CDC42EP1-204ENST00000434728 ZCCHC11Q5TAX3 1644 aaKnown RBP22.94■■□□□ 1.26
CDC42EP1-204ENST00000434728 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
CDC42EP1-204ENST00000434728 KDM5BQ9UGL1 1544 aa22.93■■□□□ 1.26
CDC42EP1-204ENST00000434728 KDM4FA0A1W2PPD8 638 aa22.93■■□□□ 1.26
CDC42EP1-204ENST00000434728 EPRSP07814 1512 aaKnown RBP22.92■■□□□ 1.26
CDC42EP1-204ENST00000434728 TEX14Q8IWB6 1497 aa22.9■■□□□ 1.26
CDC42EP1-204ENST00000434728 MAP3K4Q9Y6R4 1608 aa22.88■■□□□ 1.25
CDC42EP1-204ENST00000434728 GOLGA3Q08378 1498 aa22.87■■□□□ 1.25
CDC42EP1-204ENST00000434728 WDR7Q9Y4E6 1490 aa22.84■■□□□ 1.25
CDC42EP1-204ENST00000434728 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
CDC42EP1-204ENST00000434728 ADGRL1O94910 1474 aa22.79■■□□□ 1.24
CDC42EP1-204ENST00000434728 KCNH8Q96L42 1107 aa22.76■■□□□ 1.23
CDC42EP1-204ENST00000434728 COL17A1Q9UMD9 1497 aaPredicted RBP22.76■■□□□ 1.23
CDC42EP1-204ENST00000434728 ABCA8O94911 1581 aa22.73■■□□□ 1.23
CDC42EP1-204ENST00000434728 CFAP43Q8NDM7 1665 aa22.73■■□□□ 1.23
CDC42EP1-204ENST00000434728 CD109Q6YHK3 1445 aa22.73■■□□□ 1.23
CDC42EP1-204ENST00000434728 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
CDC42EP1-204ENST00000434728 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
CDC42EP1-204ENST00000434728 MAGI3Q5TCQ9 1506 aa22.67■■□□□ 1.22
CDC42EP1-204ENST00000434728 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
CDC42EP1-204ENST00000434728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
CDC42EP1-204ENST00000434728 HNRNPUL2Q1KMD3 747 aaKnown RBP22.57■■□□□ 1.2
CDC42EP1-204ENST00000434728 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
CDC42EP1-204ENST00000434728 ATP10BO94823 1461 aa22.54■■□□□ 1.2
CDC42EP1-204ENST00000434728 RANGAP1P46060 587 aaPredicted RBP22.54■■□□□ 1.2
CDC42EP1-204ENST00000434728 HECW2Q9P2P5 1572 aa22.54■■□□□ 1.2
CDC42EP1-204ENST00000434728 KIF21BO75037 1637 aa22.53■■□□□ 1.2
CDC42EP1-204ENST00000434728 RAPGEF6Q8TEU7 1601 aa22.53■■□□□ 1.2
CDC42EP1-204ENST00000434728 SAMD9Q5K651 1589 aa22.52■■□□□ 1.2
CDC42EP1-204ENST00000434728 ARAP3Q8WWN8 1544 aa22.49■■□□□ 1.19
CDC42EP1-204ENST00000434728 ABCA9Q8IUA7 1624 aa22.49■■□□□ 1.19
CDC42EP1-204ENST00000434728 EEA1Q15075 1411 aa22.47■■□□□ 1.19
CDC42EP1-204ENST00000434728 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
CDC42EP1-204ENST00000434728 ILDR1Q86SU0 546 aaPredicted RBP22.45■■□□□ 1.18
CDC42EP1-204ENST00000434728 NEO1Q92859 1461 aa22.41■■□□□ 1.18
CDC42EP1-204ENST00000434728 FHOD3Q2V2M9 1422 aa22.4■■□□□ 1.18
CDC42EP1-204ENST00000434728 RAPGEF3O95398 923 aa22.39■■□□□ 1.17
CDC42EP1-204ENST00000434728 NUP153P49790 1475 aaKnown RBP22.39■■□□□ 1.17
CDC42EP1-204ENST00000434728 ARID4BQ4LE39 1312 aaPredicted RBP22.37■■□□□ 1.17
CDC42EP1-204ENST00000434728 PLEKHD1A6NEE1 506 aa22.36■■□□□ 1.17
CDC42EP1-204ENST00000434728 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
CDC42EP1-204ENST00000434728 CFAP74Q9C0B2 1584 aa22.3■■□□□ 1.16
CDC42EP1-204ENST00000434728 FRMPD1Q5SYB0 1578 aa22.29■■□□□ 1.16
CDC42EP1-204ENST00000434728 PTPRMP28827 1452 aa22.28■■□□□ 1.16
CDC42EP1-204ENST00000434728 ADAMTSL3P82987 1691 aa22.28■■□□□ 1.16
CDC42EP1-204ENST00000434728 DENND4BO75064 1496 aaPredicted RBP22.28■■□□□ 1.16
CDC42EP1-204ENST00000434728 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
CDC42EP1-204ENST00000434728 FANCAO15360 1455 aa22.26■■□□□ 1.15
CDC42EP1-204ENST00000434728 BCORL1Q5H9F3 1711 aa22.26■■□□□ 1.15
CDC42EP1-204ENST00000434728 ARHGEF40Q8TER5 1519 aa22.24■■□□□ 1.15
CDC42EP1-204ENST00000434728 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
CDC42EP1-204ENST00000434728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.23■■□□□ 1.15
CDC42EP1-204ENST00000434728 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
CDC42EP1-204ENST00000434728 MADDQ8WXG6 1647 aa22.23■■□□□ 1.15
CDC42EP1-204ENST00000434728 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
CDC42EP1-204ENST00000434728 RICTORQ6R327 1708 aa22.22■■□□□ 1.15
CDC42EP1-204ENST00000434728 TTC37Q6PGP7 1564 aa22.21■■□□□ 1.15
CDC42EP1-204ENST00000434728 CDK13Q14004 1512 aaKnown RBP22.2■■□□□ 1.14
CDC42EP1-204ENST00000434728 RIMS1Q86UR5 1692 aaKnown RBP22.18■■□□□ 1.14
CDC42EP1-204ENST00000434728 POGZQ7Z3K3 1410 aa22.17■■□□□ 1.14
CDC42EP1-204ENST00000434728 PLPPR3Q6T4P5 718 aa22.15■■□□□ 1.14
CDC42EP1-204ENST00000434728 HECW1Q76N89 1606 aa22.15■■□□□ 1.14
CDC42EP1-204ENST00000434728 ZFYVE16Q7Z3T8 1539 aa22.15■■□□□ 1.14
CDC42EP1-204ENST00000434728 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
CDC42EP1-204ENST00000434728 PCF11O94913 1555 aaKnown RBP22.13■■□□□ 1.13
CDC42EP1-204ENST00000434728 ZMYM4Q5VZL5 1548 aa22.13■■□□□ 1.13
CDC42EP1-204ENST00000434728 CDK11AQ9UQ88 783 aaPredicted RBP22.12■■□□□ 1.13
CDC42EP1-204ENST00000434728 MAGI2Q86UL8 1455 aa22.09■■□□□ 1.13
CDC42EP1-204ENST00000434728 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
CDC42EP1-204ENST00000434728 SCAPERQ9BY12 1400 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms