RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 TDRD9Q8NDG6 1382 aaKnown RBP19.74■□□□□ 0.75
SCRN1-207ENST00000434476 TIAM1Q13009 1591 aa19.74■□□□□ 0.75
SCRN1-207ENST00000434476 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.75
SCRN1-207ENST00000434476 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
SCRN1-207ENST00000434476 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
SCRN1-207ENST00000434476 TARBP1Q13395 1621 aaKnown RBP19.7■□□□□ 0.74
SCRN1-207ENST00000434476 CTTNBP2Q8WZ74 1663 aa19.69■□□□□ 0.74
SCRN1-207ENST00000434476 LRRC9Q6ZRR7 1453 aa19.68■□□□□ 0.74
SCRN1-207ENST00000434476 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
SCRN1-207ENST00000434476 CASKIN1Q8WXD9 1431 aa19.67■□□□□ 0.74
SCRN1-207ENST00000434476 FYCO1Q9BQS8 1478 aa19.66■□□□□ 0.74
SCRN1-207ENST00000434476 FMN1Q68DA7 1419 aa19.64■□□□□ 0.74
SCRN1-207ENST00000434476 P3H3Q8IVL6 736 aa19.63■□□□□ 0.73
SCRN1-207ENST00000434476 FHOD3Q2V2M9 1422 aa19.63■□□□□ 0.73
SCRN1-207ENST00000434476 PCF11O94913 1555 aaKnown RBP19.62■□□□□ 0.73
SCRN1-207ENST00000434476 CFAP43Q8NDM7 1665 aa19.61■□□□□ 0.73
SCRN1-207ENST00000434476 SAMD9Q5K651 1589 aa19.58■□□□□ 0.72
SCRN1-207ENST00000434476 DHX57Q6P158 1386 aaKnown RBP19.57■□□□□ 0.72
SCRN1-207ENST00000434476 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
SCRN1-207ENST00000434476 ZNF316A6NFI3 1004 aaPredicted RBP19.55■□□□□ 0.72
SCRN1-207ENST00000434476 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
SCRN1-207ENST00000434476 WDR62O43379 1518 aa19.53■□□□□ 0.72
SCRN1-207ENST00000434476 ATP1B4Q9UN42 357 aaPredicted RBP19.53■□□□□ 0.72
SCRN1-207ENST00000434476 PHLDB1Q86UU1 1377 aa19.53■□□□□ 0.72
SCRN1-207ENST00000434476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.52■□□□□ 0.71
SCRN1-207ENST00000434476 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.71
SCRN1-207ENST00000434476 PBRM1Q86U86 1689 aa19.52■□□□□ 0.71
SCRN1-207ENST00000434476 DIEXFQ68CQ4 756 aaKnown RBP19.51■□□□□ 0.71
SCRN1-207ENST00000434476 ADAMTS12P58397 1594 aa19.48■□□□□ 0.71
SCRN1-207ENST00000434476 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
SCRN1-207ENST00000434476 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
SCRN1-207ENST00000434476 ITGAEP38570 1179 aa19.42■□□□□ 0.7
SCRN1-207ENST00000434476 IQGAP2Q13576 1575 aa19.41■□□□□ 0.7
SCRN1-207ENST00000434476 FAM50AQ14320 339 aaKnown RBP19.41■□□□□ 0.7
SCRN1-207ENST00000434476 MTUS2Q5JR59 1369 aa19.41■□□□□ 0.7
SCRN1-207ENST00000434476 RAB3GAP2Q9H2M9 1393 aa19.41■□□□□ 0.7
SCRN1-207ENST00000434476 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
SCRN1-207ENST00000434476 CCDC18Q5T9S5 1454 aa19.37■□□□□ 0.69
SCRN1-207ENST00000434476 UGGT2Q9NYU1 1516 aa19.37■□□□□ 0.69
SCRN1-207ENST00000434476 ERCC6Q03468 1493 aa19.37■□□□□ 0.69
SCRN1-207ENST00000434476 FGD6Q6ZV73 1430 aa19.36■□□□□ 0.69
SCRN1-207ENST00000434476 KIAA0586Q9BVV6 1533 aa19.35■□□□□ 0.69
SCRN1-207ENST00000434476 EHBP1L1Q8N3D4 1523 aa19.33■□□□□ 0.69
SCRN1-207ENST00000434476 HECW1Q76N89 1606 aa19.31■□□□□ 0.68
SCRN1-207ENST00000434476 NCOA2Q15596 1464 aa19.31■□□□□ 0.68
SCRN1-207ENST00000434476 LRRIQ1Q96JM4 1722 aa19.3■□□□□ 0.68
SCRN1-207ENST00000434476 MYOM3Q5VTT5 1437 aa19.3■□□□□ 0.68
SCRN1-207ENST00000434476 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
SCRN1-207ENST00000434476 SUPT6HQ7KZ85 1726 aaKnown RBP19.29■□□□□ 0.68
SCRN1-207ENST00000434476 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
SCRN1-207ENST00000434476 GRIN2AQ12879 1464 aa19.28■□□□□ 0.68
SCRN1-207ENST00000434476 ARHGEF11O15085 1522 aa19.27■□□□□ 0.68
SCRN1-207ENST00000434476 EPRSP07814 1512 aaKnown RBP19.25■□□□□ 0.67
SCRN1-207ENST00000434476 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
SCRN1-207ENST00000434476 TIMELESSQ9UNS1 1208 aa19.23■□□□□ 0.67
SCRN1-207ENST00000434476 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
SCRN1-207ENST00000434476 DISP1Q96F81 1524 aa19.21■□□□□ 0.67
SCRN1-207ENST00000434476 MAGI3Q5TCQ9 1506 aa19.2■□□□□ 0.66
SCRN1-207ENST00000434476 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
SCRN1-207ENST00000434476 HFM1A2PYH4 1435 aa19.2■□□□□ 0.66
SCRN1-207ENST00000434476 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
SCRN1-207ENST00000434476 TCOF1Q13428 1488 aaKnown RBP19.19■□□□□ 0.66
SCRN1-207ENST00000434476 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
SCRN1-207ENST00000434476 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
SCRN1-207ENST00000434476 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
SCRN1-207ENST00000434476 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
SCRN1-207ENST00000434476 NUP160Q12769 1436 aa19.13■□□□□ 0.65
SCRN1-207ENST00000434476 CDK11AQ9UQ88 783 aaPredicted RBP19.12■□□□□ 0.65
SCRN1-207ENST00000434476 CDK13Q14004 1512 aaKnown RBP19.12■□□□□ 0.65
SCRN1-207ENST00000434476 ACIN1Q9UKV3 1341 aaKnown RBP19.11■□□□□ 0.65
SCRN1-207ENST00000434476 NAIPQ13075 1403 aa19.11■□□□□ 0.65
SCRN1-207ENST00000434476 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
SCRN1-207ENST00000434476 CEP170Q5SW79 1584 aa19.11■□□□□ 0.65
SCRN1-207ENST00000434476 CARMIL2Q6F5E8 1435 aa19.1■□□□□ 0.65
SCRN1-207ENST00000434476 AKNAQ7Z591 1439 aa19.1■□□□□ 0.65
SCRN1-207ENST00000434476 MIER1Q8N108 512 aa19.09■□□□□ 0.65
SCRN1-207ENST00000434476 RAPGEF6Q8TEU7 1601 aa19.09■□□□□ 0.65
SCRN1-207ENST00000434476 NUP153P49790 1475 aaKnown RBP19.09■□□□□ 0.65
SCRN1-207ENST00000434476 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
SCRN1-207ENST00000434476 SIN3AQ96ST3 1273 aa19.06■□□□□ 0.64
SCRN1-207ENST00000434476 FBLN2P98095 1184 aa19.04■□□□□ 0.64
SCRN1-207ENST00000434476 NEUROD1Q13562 356 aa19.03■□□□□ 0.64
SCRN1-207ENST00000434476 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
SCRN1-207ENST00000434476 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
SCRN1-207ENST00000434476 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
SCRN1-207ENST00000434476 ROCK1Q13464 1354 aa18.99■□□□□ 0.63
SCRN1-207ENST00000434476 ARID3CA6NKF2 412 aa18.98■□□□□ 0.63
SCRN1-207ENST00000434476 GCC2Q8IWJ2 1684 aa18.98■□□□□ 0.63
SCRN1-207ENST00000434476 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
SCRN1-207ENST00000434476 PLB1Q6P1J6 1458 aa18.95■□□□□ 0.62
SCRN1-207ENST00000434476 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
SCRN1-207ENST00000434476 DAPK1P53355 1430 aa18.93■□□□□ 0.62
SCRN1-207ENST00000434476 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
SCRN1-207ENST00000434476 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
SCRN1-207ENST00000434476 ABCA8O94911 1581 aa18.91■□□□□ 0.62
SCRN1-207ENST00000434476 ABCC5O15440 1437 aa18.91■□□□□ 0.62
SCRN1-207ENST00000434476 ADCY10Q96PN6 1610 aa18.91■□□□□ 0.62
SCRN1-207ENST00000434476 DNMT1P26358 1616 aaKnown RBP18.9■□□□□ 0.62
SCRN1-207ENST00000434476 GPATCH8Q9UKJ3 1502 aaKnown RBP18.88■□□□□ 0.61
SCRN1-207ENST00000434476 PLEKHD1A6NEE1 506 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms