RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 NPM1P06748 294 aaKnown RBP eCLIP39.44■■■■□ 3.9
PTPRA-207ENST00000431048 ABCC10Q5T3U5 1492 aa39.43■■■■□ 3.9
PTPRA-207ENST00000431048 RUSC2Q8N2Y8 1516 aa39.42■■■■□ 3.9
PTPRA-207ENST00000431048 FAM69CQ0P6D2 419 aa39.42■■■■□ 3.9
PTPRA-207ENST00000431048 MAPKBP1O60336 1514 aa39.37■■■■□ 3.89
PTPRA-207ENST00000431048 KIAA0586Q9BVV6 1533 aa39.28■■■■□ 3.88
PTPRA-207ENST00000431048 ADCY10Q96PN6 1610 aa39.25■■■■□ 3.87
PTPRA-207ENST00000431048 IGF1RP08069 1367 aa39.24■■■■□ 3.87
PTPRA-207ENST00000431048 DIP2BQ9P265 1576 aa39.24■■■■□ 3.87
PTPRA-207ENST00000431048 KIF27Q86VH2 1401 aa39.14■■■■□ 3.86
PTPRA-207ENST00000431048 CUL7Q14999 1698 aa39.08■■■■□ 3.85
PTPRA-207ENST00000431048 KDM6BO15054 1643 aa39.03■■■■□ 3.84
PTPRA-207ENST00000431048 PTPRGP23470 1445 aa39.02■■■■□ 3.84
PTPRA-207ENST00000431048 KDM4FA0A1W2PPD8 638 aa39■■■■□ 3.83
PTPRA-207ENST00000431048 CARMIL1Q5VZK9 1371 aa38.94■■■■□ 3.82
PTPRA-207ENST00000431048 TNIKQ9UKE5 1360 aa38.91■■■■□ 3.82
PTPRA-207ENST00000431048 CARMIL2Q6F5E8 1435 aa38.89■■■■□ 3.82
PTPRA-207ENST00000431048 TSPOAP1O95153 1857 aa38.89■■■■□ 3.82
PTPRA-207ENST00000431048 ABCC2Q92887 1545 aa38.87■■■■□ 3.81
PTPRA-207ENST00000431048 PLB1Q6P1J6 1458 aa38.8■■■■□ 3.8
PTPRA-207ENST00000431048 TTBK1Q5TCY1 1321 aaPredicted RBP38.78■■■■□ 3.8
PTPRA-207ENST00000431048 ASXL2Q76L83 1435 aa38.78■■■■□ 3.8
PTPRA-207ENST00000431048 UHRF1BP1LA0JNW5 1464 aa38.78■■■■□ 3.8
PTPRA-207ENST00000431048 GLI2P10070 1586 aa38.77■■■■□ 3.8
PTPRA-207ENST00000431048 IQGAP2Q13576 1575 aa38.73■■■■□ 3.79
PTPRA-207ENST00000431048 UACAQ9BZF9 1416 aa38.7■■■■□ 3.79
PTPRA-207ENST00000431048 PPRC1Q5VV67 1664 aaKnown RBP38.65■■■■□ 3.78
PTPRA-207ENST00000431048 DISP1Q96F81 1524 aa38.64■■■■□ 3.78
PTPRA-207ENST00000431048 KDM5BQ9UGL1 1544 aa38.58■■■■□ 3.77
PTPRA-207ENST00000431048 EPRSP07814 1512 aaKnown RBP38.55■■■■□ 3.76
PTPRA-207ENST00000431048 UGGT2Q9NYU1 1516 aa38.53■■■■□ 3.76
PTPRA-207ENST00000431048 COL17A1Q9UMD9 1497 aaPredicted RBP38.51■■■■□ 3.76
PTPRA-207ENST00000431048 RAPGEF2Q9Y4G8 1499 aa38.49■■■■□ 3.75
PTPRA-207ENST00000431048 ADGRL1O94910 1474 aa38.47■■■■□ 3.75
PTPRA-207ENST00000431048 MAP3K4Q9Y6R4 1608 aa38.46■■■■□ 3.75
PTPRA-207ENST00000431048 TEX14Q8IWB6 1497 aa38.46■■■■□ 3.75
PTPRA-207ENST00000431048 ZCCHC11Q5TAX3 1644 aaKnown RBP38.39■■■■□ 3.74
PTPRA-207ENST00000431048 KIAA0556O60303 1618 aa38.38■■■■□ 3.73
PTPRA-207ENST00000431048 ILDR1Q86SU0 546 aaPredicted RBP38.36■■■■□ 3.73
PTPRA-207ENST00000431048 WDR7Q9Y4E6 1490 aa38.3■■■■□ 3.72
PTPRA-207ENST00000431048 MAGI3Q5TCQ9 1506 aa38.18■■■■□ 3.7
PTPRA-207ENST00000431048 GOLGA3Q08378 1498 aa38.17■■■■□ 3.7
PTPRA-207ENST00000431048 CD109Q6YHK3 1445 aa38.16■■■■□ 3.7
PTPRA-207ENST00000431048 ABCA8O94911 1581 aa38.11■■■■□ 3.69
PTPRA-207ENST00000431048 HECW2Q9P2P5 1572 aa38.1■■■■□ 3.69
PTPRA-207ENST00000431048 KCNH8Q96L42 1107 aa38.09■■■■□ 3.69
PTPRA-207ENST00000431048 CFAP43Q8NDM7 1665 aa38.08■■■■□ 3.69
PTPRA-207ENST00000431048 CTTNBP2Q8WZ74 1663 aa38.07■■■■□ 3.69
PTPRA-207ENST00000431048 PRXQ9BXM0 1461 aa37.97■■■■□ 3.67
PTPRA-207ENST00000431048 ARAP3Q8WWN8 1544 aa37.91■■■■□ 3.66
PTPRA-207ENST00000431048 FAM9AQ8IZU1 332 aaPredicted RBP37.9■■■■□ 3.66
PTPRA-207ENST00000431048 PHLDB1Q86UU1 1377 aa37.84■■■■□ 3.65
PTPRA-207ENST00000431048 ATP10BO94823 1461 aa37.83■■■■□ 3.65
PTPRA-207ENST00000431048 KIF21BO75037 1637 aa37.77■■■■□ 3.64
PTPRA-207ENST00000431048 P3H3Q8IVL6 736 aa37.72■■■■□ 3.63
PTPRA-207ENST00000431048 ARID3CA6NKF2 412 aa37.71■■■■□ 3.63
PTPRA-207ENST00000431048 ABCA9Q8IUA7 1624 aa37.7■■■■□ 3.63
PTPRA-207ENST00000431048 NEO1Q92859 1461 aa37.64■■■■□ 3.62
PTPRA-207ENST00000431048 RAPGEF3O95398 923 aa37.62■■■■□ 3.61
PTPRA-207ENST00000431048 ADAMTSL3P82987 1691 aa37.6■■■■□ 3.61
PTPRA-207ENST00000431048 PTPRMP28827 1452 aa37.6■■■■□ 3.61
PTPRA-207ENST00000431048 SAMD9Q5K651 1589 aa37.59■■■■□ 3.61
PTPRA-207ENST00000431048 CSRNP3Q8WYN3 585 aa37.56■■■■□ 3.6
PTPRA-207ENST00000431048 FBXO41Q8TF61 875 aa37.55■■■■□ 3.6
PTPRA-207ENST00000431048 RAPGEF6Q8TEU7 1601 aa37.54■■■■□ 3.6
PTPRA-207ENST00000431048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.5■■■■□ 3.59
PTPRA-207ENST00000431048 HNRNPUL2Q1KMD3 747 aaKnown RBP37.5■■■■□ 3.59
PTPRA-207ENST00000431048 NUP153P49790 1475 aaKnown RBP37.45■■■■□ 3.59
PTPRA-207ENST00000431048 FRMPD1Q5SYB0 1578 aa37.44■■■■□ 3.58
PTPRA-207ENST00000431048 BCORL1Q5H9F3 1711 aa37.43■■■■□ 3.58
PTPRA-207ENST00000431048 ARID4BQ4LE39 1312 aaPredicted RBP37.41■■■■□ 3.58
PTPRA-207ENST00000431048 PLEKHD1A6NEE1 506 aa37.38■■■■□ 3.57
PTPRA-207ENST00000431048 DENND4BO75064 1496 aaPredicted RBP37.34■■■■□ 3.57
PTPRA-207ENST00000431048 MADDQ8WXG6 1647 aa37.34■■■■□ 3.57
PTPRA-207ENST00000431048 PCF11O94913 1555 aaKnown RBP37.33■■■■□ 3.57
PTPRA-207ENST00000431048 FHOD3Q2V2M9 1422 aa37.32■■■■□ 3.56
PTPRA-207ENST00000431048 AKNAQ7Z591 1439 aa37.31■■■■□ 3.56
PTPRA-207ENST00000431048 LMTK3Q96Q04 1460 aa37.29■■■■□ 3.56
PTPRA-207ENST00000431048 ARHGEF40Q8TER5 1519 aa37.29■■■■□ 3.56
PTPRA-207ENST00000431048 EEA1Q15075 1411 aa37.28■■■■□ 3.56
PTPRA-207ENST00000431048 RICTORQ6R327 1708 aa37.24■■■■□ 3.55
PTPRA-207ENST00000431048 FANCAO15360 1455 aa37.24■■■■□ 3.55
PTPRA-207ENST00000431048 RANGAP1P46060 587 aaPredicted RBP37.22■■■■□ 3.55
PTPRA-207ENST00000431048 CFAP74Q9C0B2 1584 aa37.21■■■■□ 3.55
PTPRA-207ENST00000431048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.2■■■■□ 3.55
PTPRA-207ENST00000431048 POGZQ7Z3K3 1410 aa37.19■■■■□ 3.54
PTPRA-207ENST00000431048 ZMYM4Q5VZL5 1548 aa37.17■■■■□ 3.54
PTPRA-207ENST00000431048 RIMS1Q86UR5 1692 aaKnown RBP37.16■■■■□ 3.54
PTPRA-207ENST00000431048 MAGI2Q86UL8 1455 aa37.15■■■■□ 3.54
PTPRA-207ENST00000431048 EFCAB5A4FU69 1503 aa37.12■■■■□ 3.53
PTPRA-207ENST00000431048 ZFYVE16Q7Z3T8 1539 aa37.09■■■■□ 3.53
PTPRA-207ENST00000431048 YEATS2Q9ULM3 1422 aa37.09■■■■□ 3.53
PTPRA-207ENST00000431048 TTC37Q6PGP7 1564 aa37.08■■■■□ 3.53
PTPRA-207ENST00000431048 HSPA2P54652 639 aa37.06■■■■□ 3.52
PTPRA-207ENST00000431048 PLCH2O75038 1416 aa37.03■■■■□ 3.52
PTPRA-207ENST00000431048 SCAPERQ9BY12 1400 aa37.01■■■■□ 3.51
PTPRA-207ENST00000431048 HECW1Q76N89 1606 aa37■■■■□ 3.51
PTPRA-207ENST00000431048 SIGLEC1Q9BZZ2 1709 aa36.99■■■■□ 3.51
PTPRA-207ENST00000431048 CDK13Q14004 1512 aaKnown RBP36.96■■■■□ 3.51
PTPRA-207ENST00000431048 PLPPR3Q6T4P5 718 aa36.96■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms