RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 MAPKBP1O60336 1514 aa26.39■■□□□ 1.82
PTCD1-204ENST00000430982 RUSC2Q8N2Y8 1516 aa26.37■■□□□ 1.81
PTCD1-204ENST00000430982 DIP2BQ9P265 1576 aa26.36■■□□□ 1.81
PTCD1-204ENST00000430982 JPH4Q96JJ6 628 aa26.35■■□□□ 1.81
PTCD1-204ENST00000430982 ADCY10Q96PN6 1610 aa26.29■■□□□ 1.8
PTCD1-204ENST00000430982 FAM69CQ0P6D2 419 aa26.28■■□□□ 1.8
PTCD1-204ENST00000430982 KDM6BO15054 1643 aa26.21■■□□□ 1.79
PTCD1-204ENST00000430982 KDM4FA0A1W2PPD8 638 aa26.2■■□□□ 1.78
PTCD1-204ENST00000430982 NPM1P06748 294 aaKnown RBP eCLIP26.17■■□□□ 1.78
PTCD1-204ENST00000430982 KIAA0586Q9BVV6 1533 aa26.14■■□□□ 1.77
PTCD1-204ENST00000430982 TSPOAP1O95153 1857 aa26.06■■□□□ 1.76
PTCD1-204ENST00000430982 CUL7Q14999 1698 aa26.02■■□□□ 1.76
PTCD1-204ENST00000430982 IGF1RP08069 1367 aa26■■□□□ 1.75
PTCD1-204ENST00000430982 PPRC1Q5VV67 1664 aaKnown RBP25.97■■□□□ 1.75
PTCD1-204ENST00000430982 GLI2P10070 1586 aa25.95■■□□□ 1.75
PTCD1-204ENST00000430982 ABCC2Q92887 1545 aa25.95■■□□□ 1.74
PTCD1-204ENST00000430982 PTPRGP23470 1445 aa25.94■■□□□ 1.74
PTCD1-204ENST00000430982 ILDR1Q86SU0 546 aaPredicted RBP25.93■■□□□ 1.74
PTCD1-204ENST00000430982 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
PTCD1-204ENST00000430982 PLB1Q6P1J6 1458 aa25.89■■□□□ 1.73
PTCD1-204ENST00000430982 ASXL2Q76L83 1435 aa25.88■■□□□ 1.73
PTCD1-204ENST00000430982 UHRF1BP1LA0JNW5 1464 aa25.87■■□□□ 1.73
PTCD1-204ENST00000430982 TNIKQ9UKE5 1360 aa25.87■■□□□ 1.73
PTCD1-204ENST00000430982 ADGRL1O94910 1474 aa25.86■■□□□ 1.73
PTCD1-204ENST00000430982 CARMIL2Q6F5E8 1435 aa25.83■■□□□ 1.73
PTCD1-204ENST00000430982 COL17A1Q9UMD9 1497 aaPredicted RBP25.81■■□□□ 1.72
PTCD1-204ENST00000430982 IQGAP2Q13576 1575 aa25.8■■□□□ 1.72
PTCD1-204ENST00000430982 MAP3K4Q9Y6R4 1608 aa25.79■■□□□ 1.72
PTCD1-204ENST00000430982 CARMIL1Q5VZK9 1371 aa25.78■■□□□ 1.72
PTCD1-204ENST00000430982 UACAQ9BZF9 1416 aa25.76■■□□□ 1.71
PTCD1-204ENST00000430982 EPRSP07814 1512 aaKnown RBP25.76■■□□□ 1.71
PTCD1-204ENST00000430982 DISP1Q96F81 1524 aa25.75■■□□□ 1.71
PTCD1-204ENST00000430982 KDM5BQ9UGL1 1544 aa25.75■■□□□ 1.71
PTCD1-204ENST00000430982 HECW2Q9P2P5 1572 aa25.71■■□□□ 1.71
PTCD1-204ENST00000430982 TEX14Q8IWB6 1497 aa25.69■■□□□ 1.7
PTCD1-204ENST00000430982 ZCCHC11Q5TAX3 1644 aaKnown RBP25.66■■□□□ 1.7
PTCD1-204ENST00000430982 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
PTCD1-204ENST00000430982 UGGT2Q9NYU1 1516 aa25.65■■□□□ 1.7
PTCD1-204ENST00000430982 KIAA0556O60303 1618 aa25.59■■□□□ 1.69
PTCD1-204ENST00000430982 WDR7Q9Y4E6 1490 aa25.56■■□□□ 1.68
PTCD1-204ENST00000430982 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
PTCD1-204ENST00000430982 MAGI3Q5TCQ9 1506 aa25.51■■□□□ 1.67
PTCD1-204ENST00000430982 RAPGEF2Q9Y4G8 1499 aa25.5■■□□□ 1.67
PTCD1-204ENST00000430982 CFAP43Q8NDM7 1665 aa25.48■■□□□ 1.67
PTCD1-204ENST00000430982 ABCA8O94911 1581 aa25.41■■□□□ 1.66
PTCD1-204ENST00000430982 CD109Q6YHK3 1445 aa25.41■■□□□ 1.66
PTCD1-204ENST00000430982 CSRNP3Q8WYN3 585 aa25.38■■□□□ 1.65
PTCD1-204ENST00000430982 CTTNBP2Q8WZ74 1663 aa25.36■■□□□ 1.65
PTCD1-204ENST00000430982 FAM9AQ8IZU1 332 aaPredicted RBP25.36■■□□□ 1.65
PTCD1-204ENST00000430982 KIF21BO75037 1637 aa25.36■■□□□ 1.65
PTCD1-204ENST00000430982 EEA1Q15075 1411 aa25.36■■□□□ 1.65
PTCD1-204ENST00000430982 PRXQ9BXM0 1461 aa25.34■■□□□ 1.65
PTCD1-204ENST00000430982 ARAP3Q8WWN8 1544 aa25.33■■□□□ 1.65
PTCD1-204ENST00000430982 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
PTCD1-204ENST00000430982 FBXO41Q8TF61 875 aa25.26■■□□□ 1.63
PTCD1-204ENST00000430982 ADAMTSL3P82987 1691 aa25.26■■□□□ 1.63
PTCD1-204ENST00000430982 KCNH8Q96L42 1107 aa25.23■■□□□ 1.63
PTCD1-204ENST00000430982 PTPRMP28827 1452 aa25.21■■□□□ 1.63
PTCD1-204ENST00000430982 ABCA9Q8IUA7 1624 aa25.19■■□□□ 1.62
PTCD1-204ENST00000430982 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
PTCD1-204ENST00000430982 ATP10BO94823 1461 aa25.15■■□□□ 1.62
PTCD1-204ENST00000430982 BCORL1Q5H9F3 1711 aa25.12■■□□□ 1.61
PTCD1-204ENST00000430982 FRMPD1Q5SYB0 1578 aa25.11■■□□□ 1.61
PTCD1-204ENST00000430982 PCF11O94913 1555 aaKnown RBP25.1■■□□□ 1.61
PTCD1-204ENST00000430982 NEO1Q92859 1461 aa25.1■■□□□ 1.61
PTCD1-204ENST00000430982 LMTK3Q96Q04 1460 aa25.08■■□□□ 1.6
PTCD1-204ENST00000430982 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
PTCD1-204ENST00000430982 MADDQ8WXG6 1647 aa25.07■■□□□ 1.6
PTCD1-204ENST00000430982 RAPGEF3O95398 923 aa25.02■■□□□ 1.6
PTCD1-204ENST00000430982 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
PTCD1-204ENST00000430982 ARHGEF40Q8TER5 1519 aa24.99■■□□□ 1.59
PTCD1-204ENST00000430982 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
PTCD1-204ENST00000430982 RAPGEF6Q8TEU7 1601 aa24.97■■□□□ 1.59
PTCD1-204ENST00000430982 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
PTCD1-204ENST00000430982 ARID3CA6NKF2 412 aa24.96■■□□□ 1.59
PTCD1-204ENST00000430982 P3H3Q8IVL6 736 aa24.95■■□□□ 1.58
PTCD1-204ENST00000430982 RICTORQ6R327 1708 aa24.94■■□□□ 1.58
PTCD1-204ENST00000430982 RIMS1Q86UR5 1692 aaKnown RBP24.93■■□□□ 1.58
PTCD1-204ENST00000430982 NUP153P49790 1475 aaKnown RBP24.91■■□□□ 1.58
PTCD1-204ENST00000430982 FHOD3Q2V2M9 1422 aa24.89■■□□□ 1.58
PTCD1-204ENST00000430982 ZMYM4Q5VZL5 1548 aa24.87■■□□□ 1.57
PTCD1-204ENST00000430982 DENND4BO75064 1496 aaPredicted RBP24.87■■□□□ 1.57
PTCD1-204ENST00000430982 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
PTCD1-204ENST00000430982 SIGLEC1Q9BZZ2 1709 aa24.84■■□□□ 1.57
PTCD1-204ENST00000430982 CFAP74Q9C0B2 1584 aa24.84■■□□□ 1.57
PTCD1-204ENST00000430982 AKNAQ7Z591 1439 aa24.81■■□□□ 1.56
PTCD1-204ENST00000430982 FANCAO15360 1455 aa24.81■■□□□ 1.56
PTCD1-204ENST00000430982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.79■■□□□ 1.567e-7■□□□□ 9.7
PTCD1-204ENST00000430982 POGZQ7Z3K3 1410 aa24.78■■□□□ 1.56
PTCD1-204ENST00000430982 EFCAB5A4FU69 1503 aa24.77■■□□□ 1.56
PTCD1-204ENST00000430982 HSPA2P54652 639 aa24.77■■□□□ 1.56
PTCD1-204ENST00000430982 MAGI2Q86UL8 1455 aa24.77■■□□□ 1.56
PTCD1-204ENST00000430982 ZFYVE16Q7Z3T8 1539 aa24.76■■□□□ 1.55
PTCD1-204ENST00000430982 TTC37Q6PGP7 1564 aa24.76■■□□□ 1.55
PTCD1-204ENST00000430982 YEATS2Q9ULM3 1422 aa24.76■■□□□ 1.55
PTCD1-204ENST00000430982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.73■■□□□ 1.55
PTCD1-204ENST00000430982 HNRNPUL2Q1KMD3 747 aaKnown RBP24.73■■□□□ 1.55
PTCD1-204ENST00000430982 CERKQ8TCT0 537 aa24.72■■□□□ 1.55
PTCD1-204ENST00000430982 FER1L4A9Z1Z3 1794 aa24.71■■□□□ 1.55
PTCD1-204ENST00000430982 PLEKHD1A6NEE1 506 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms