RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 MAPKBP1O60336 1514 aa26.39■■□□□ 1.82
PTCD1-204ENST00000430982 RUSC2Q8N2Y8 1516 aa26.37■■□□□ 1.81
PTCD1-204ENST00000430982 DIP2BQ9P265 1576 aa26.36■■□□□ 1.81
PTCD1-204ENST00000430982 JPH4Q96JJ6 628 aa26.35■■□□□ 1.81
PTCD1-204ENST00000430982 ADCY10Q96PN6 1610 aa26.29■■□□□ 1.8
PTCD1-204ENST00000430982 FAM69CQ0P6D2 419 aa26.28■■□□□ 1.8
PTCD1-204ENST00000430982 KDM6BO15054 1643 aa26.21■■□□□ 1.79
PTCD1-204ENST00000430982 KDM4FA0A1W2PPD8 638 aa26.2■■□□□ 1.78
PTCD1-204ENST00000430982 NPM1P06748 294 aaKnown RBP eCLIP26.17■■□□□ 1.78
PTCD1-204ENST00000430982 KIAA0586Q9BVV6 1533 aa26.14■■□□□ 1.77
PTCD1-204ENST00000430982 TSPOAP1O95153 1857 aa26.06■■□□□ 1.76
PTCD1-204ENST00000430982 CUL7Q14999 1698 aa26.02■■□□□ 1.76
PTCD1-204ENST00000430982 IGF1RP08069 1367 aa26■■□□□ 1.75
PTCD1-204ENST00000430982 PPRC1Q5VV67 1664 aaKnown RBP25.97■■□□□ 1.75
PTCD1-204ENST00000430982 GLI2P10070 1586 aa25.95■■□□□ 1.75
PTCD1-204ENST00000430982 ABCC2Q92887 1545 aa25.95■■□□□ 1.74
PTCD1-204ENST00000430982 PTPRGP23470 1445 aa25.94■■□□□ 1.74
PTCD1-204ENST00000430982 ILDR1Q86SU0 546 aaPredicted RBP25.93■■□□□ 1.74
PTCD1-204ENST00000430982 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
PTCD1-204ENST00000430982 PLB1Q6P1J6 1458 aa25.89■■□□□ 1.73
PTCD1-204ENST00000430982 ASXL2Q76L83 1435 aa25.88■■□□□ 1.73
PTCD1-204ENST00000430982 UHRF1BP1LA0JNW5 1464 aa25.87■■□□□ 1.73
PTCD1-204ENST00000430982 TNIKQ9UKE5 1360 aa25.87■■□□□ 1.73
PTCD1-204ENST00000430982 ADGRL1O94910 1474 aa25.86■■□□□ 1.73
PTCD1-204ENST00000430982 CARMIL2Q6F5E8 1435 aa25.83■■□□□ 1.73
PTCD1-204ENST00000430982 COL17A1Q9UMD9 1497 aaPredicted RBP25.81■■□□□ 1.72
PTCD1-204ENST00000430982 IQGAP2Q13576 1575 aa25.8■■□□□ 1.72
PTCD1-204ENST00000430982 MAP3K4Q9Y6R4 1608 aa25.79■■□□□ 1.72
PTCD1-204ENST00000430982 CARMIL1Q5VZK9 1371 aa25.78■■□□□ 1.72
PTCD1-204ENST00000430982 UACAQ9BZF9 1416 aa25.76■■□□□ 1.71
PTCD1-204ENST00000430982 EPRSP07814 1512 aaKnown RBP25.76■■□□□ 1.71
PTCD1-204ENST00000430982 DISP1Q96F81 1524 aa25.75■■□□□ 1.71
PTCD1-204ENST00000430982 KDM5BQ9UGL1 1544 aa25.75■■□□□ 1.71
PTCD1-204ENST00000430982 HECW2Q9P2P5 1572 aa25.71■■□□□ 1.71
PTCD1-204ENST00000430982 TEX14Q8IWB6 1497 aa25.69■■□□□ 1.7
PTCD1-204ENST00000430982 ZCCHC11Q5TAX3 1644 aaKnown RBP25.66■■□□□ 1.7
PTCD1-204ENST00000430982 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
PTCD1-204ENST00000430982 UGGT2Q9NYU1 1516 aa25.65■■□□□ 1.7
PTCD1-204ENST00000430982 KIAA0556O60303 1618 aa25.59■■□□□ 1.69
PTCD1-204ENST00000430982 WDR7Q9Y4E6 1490 aa25.56■■□□□ 1.68
PTCD1-204ENST00000430982 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
PTCD1-204ENST00000430982 MAGI3Q5TCQ9 1506 aa25.51■■□□□ 1.67
PTCD1-204ENST00000430982 RAPGEF2Q9Y4G8 1499 aa25.5■■□□□ 1.67
PTCD1-204ENST00000430982 CFAP43Q8NDM7 1665 aa25.48■■□□□ 1.67
PTCD1-204ENST00000430982 ABCA8O94911 1581 aa25.41■■□□□ 1.66
PTCD1-204ENST00000430982 CD109Q6YHK3 1445 aa25.41■■□□□ 1.66
PTCD1-204ENST00000430982 CSRNP3Q8WYN3 585 aa25.38■■□□□ 1.65
PTCD1-204ENST00000430982 CTTNBP2Q8WZ74 1663 aa25.36■■□□□ 1.65
PTCD1-204ENST00000430982 FAM9AQ8IZU1 332 aaPredicted RBP25.36■■□□□ 1.65
PTCD1-204ENST00000430982 KIF21BO75037 1637 aa25.36■■□□□ 1.65
PTCD1-204ENST00000430982 EEA1Q15075 1411 aa25.36■■□□□ 1.65
PTCD1-204ENST00000430982 PRXQ9BXM0 1461 aa25.34■■□□□ 1.65
PTCD1-204ENST00000430982 ARAP3Q8WWN8 1544 aa25.33■■□□□ 1.65
PTCD1-204ENST00000430982 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
PTCD1-204ENST00000430982 FBXO41Q8TF61 875 aa25.26■■□□□ 1.63
PTCD1-204ENST00000430982 ADAMTSL3P82987 1691 aa25.26■■□□□ 1.63
PTCD1-204ENST00000430982 KCNH8Q96L42 1107 aa25.23■■□□□ 1.63
PTCD1-204ENST00000430982 PTPRMP28827 1452 aa25.21■■□□□ 1.63
PTCD1-204ENST00000430982 ABCA9Q8IUA7 1624 aa25.19■■□□□ 1.62
PTCD1-204ENST00000430982 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
PTCD1-204ENST00000430982 ATP10BO94823 1461 aa25.15■■□□□ 1.62
PTCD1-204ENST00000430982 BCORL1Q5H9F3 1711 aa25.12■■□□□ 1.61
PTCD1-204ENST00000430982 FRMPD1Q5SYB0 1578 aa25.11■■□□□ 1.61
PTCD1-204ENST00000430982 PCF11O94913 1555 aaKnown RBP25.1■■□□□ 1.61
PTCD1-204ENST00000430982 NEO1Q92859 1461 aa25.1■■□□□ 1.61
PTCD1-204ENST00000430982 LMTK3Q96Q04 1460 aa25.08■■□□□ 1.6
PTCD1-204ENST00000430982 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
PTCD1-204ENST00000430982 MADDQ8WXG6 1647 aa25.07■■□□□ 1.6
PTCD1-204ENST00000430982 RAPGEF3O95398 923 aa25.02■■□□□ 1.6
PTCD1-204ENST00000430982 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
PTCD1-204ENST00000430982 ARHGEF40Q8TER5 1519 aa24.99■■□□□ 1.59
PTCD1-204ENST00000430982 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
PTCD1-204ENST00000430982 RAPGEF6Q8TEU7 1601 aa24.97■■□□□ 1.59
PTCD1-204ENST00000430982 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
PTCD1-204ENST00000430982 ARID3CA6NKF2 412 aa24.96■■□□□ 1.59
PTCD1-204ENST00000430982 P3H3Q8IVL6 736 aa24.95■■□□□ 1.58
PTCD1-204ENST00000430982 RICTORQ6R327 1708 aa24.94■■□□□ 1.58
PTCD1-204ENST00000430982 RIMS1Q86UR5 1692 aaKnown RBP24.93■■□□□ 1.58
PTCD1-204ENST00000430982 NUP153P49790 1475 aaKnown RBP24.91■■□□□ 1.58
PTCD1-204ENST00000430982 FHOD3Q2V2M9 1422 aa24.89■■□□□ 1.58
PTCD1-204ENST00000430982 ZMYM4Q5VZL5 1548 aa24.87■■□□□ 1.57
PTCD1-204ENST00000430982 DENND4BO75064 1496 aaPredicted RBP24.87■■□□□ 1.57
PTCD1-204ENST00000430982 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
PTCD1-204ENST00000430982 SIGLEC1Q9BZZ2 1709 aa24.84■■□□□ 1.57
PTCD1-204ENST00000430982 CFAP74Q9C0B2 1584 aa24.84■■□□□ 1.57
PTCD1-204ENST00000430982 AKNAQ7Z591 1439 aa24.81■■□□□ 1.56
PTCD1-204ENST00000430982 FANCAO15360 1455 aa24.81■■□□□ 1.56
PTCD1-204ENST00000430982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.79■■□□□ 1.567e-7■□□□□ 9.7
PTCD1-204ENST00000430982 POGZQ7Z3K3 1410 aa24.78■■□□□ 1.56
PTCD1-204ENST00000430982 EFCAB5A4FU69 1503 aa24.77■■□□□ 1.56
PTCD1-204ENST00000430982 HSPA2P54652 639 aa24.77■■□□□ 1.56
PTCD1-204ENST00000430982 MAGI2Q86UL8 1455 aa24.77■■□□□ 1.56
PTCD1-204ENST00000430982 ZFYVE16Q7Z3T8 1539 aa24.76■■□□□ 1.55
PTCD1-204ENST00000430982 TTC37Q6PGP7 1564 aa24.76■■□□□ 1.55
PTCD1-204ENST00000430982 YEATS2Q9ULM3 1422 aa24.76■■□□□ 1.55
PTCD1-204ENST00000430982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.73■■□□□ 1.55
PTCD1-204ENST00000430982 HNRNPUL2Q1KMD3 747 aaKnown RBP24.73■■□□□ 1.55
PTCD1-204ENST00000430982 CERKQ8TCT0 537 aa24.72■■□□□ 1.55
PTCD1-204ENST00000430982 FER1L4A9Z1Z3 1794 aa24.71■■□□□ 1.55
PTCD1-204ENST00000430982 PLEKHD1A6NEE1 506 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms