RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 KIF21BO75037 1637 aa19.03■□□□□ 0.64
SGMS1-203ENST00000429490 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
SGMS1-203ENST00000429490 SETD5Q9C0A6 1442 aa18.97■□□□□ 0.63
SGMS1-203ENST00000429490 BCL11AQ9H165 835 aa18.96■□□□□ 0.63
SGMS1-203ENST00000429490 MRS2Q9HD23 443 aa18.96■□□□□ 0.63
SGMS1-203ENST00000429490 MTUS2Q5JR59 1369 aa18.95■□□□□ 0.62
SGMS1-203ENST00000429490 NBR1Q14596 966 aa18.94■□□□□ 0.62
SGMS1-203ENST00000429490 ATAD2BQ9ULI0 1458 aa18.94■□□□□ 0.62
SGMS1-203ENST00000429490 PPP1R15AO75807 674 aaPredicted RBP18.92■□□□□ 0.62
SGMS1-203ENST00000429490 CUX2O14529 1486 aa18.92■□□□□ 0.62
SGMS1-203ENST00000429490 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
SGMS1-203ENST00000429490 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.62
SGMS1-203ENST00000429490 B4GALNT3Q6L9W6 998 aa18.89■□□□□ 0.61
SGMS1-203ENST00000429490 CARMIL1Q5VZK9 1371 aa18.89■□□□□ 0.61
SGMS1-203ENST00000429490 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
SGMS1-203ENST00000429490 RTL5Q5HYW3 569 aaPredicted RBP18.86■□□□□ 0.61
SGMS1-203ENST00000429490 NPM2Q86SE8 214 aaKnown RBP18.86■□□□□ 0.61
SGMS1-203ENST00000429490 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.615e-9■■■□□ 17.2
SGMS1-203ENST00000429490 CCER2I3L3R5 266 aa18.84■□□□□ 0.61
SGMS1-203ENST00000429490 FOXD1Q16676 465 aa18.83■□□□□ 0.61
SGMS1-203ENST00000429490 ZNF777Q9ULD5 760 aaPredicted RBP18.81■□□□□ 0.6
SGMS1-203ENST00000429490 HSPA5P11021 654 aaKnown RBP18.78■□□□□ 0.6
SGMS1-203ENST00000429490 CCDC136Q96JN2 1154 aa18.78■□□□□ 0.6
SGMS1-203ENST00000429490 PHLDB1Q86UU1 1377 aa18.77■□□□□ 0.6
SGMS1-203ENST00000429490 FHOD3Q2V2M9 1422 aa18.75■□□□□ 0.59
SGMS1-203ENST00000429490 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
SGMS1-203ENST00000429490 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
SGMS1-203ENST00000429490 ANP32AP39687 249 aaKnown RBP18.73■□□□□ 0.59
SGMS1-203ENST00000429490 FHAD1B1AJZ9 1412 aa18.72■□□□□ 0.59
SGMS1-203ENST00000429490 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
SGMS1-203ENST00000429490 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
SGMS1-203ENST00000429490 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
SGMS1-203ENST00000429490 PRXQ9BXM0 1461 aa18.7■□□□□ 0.58
SGMS1-203ENST00000429490 TMC1Q8TDI8 760 aa18.68■□□□□ 0.58
SGMS1-203ENST00000429490 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
SGMS1-203ENST00000429490 IGF1RP08069 1367 aa18.67■□□□□ 0.58
SGMS1-203ENST00000429490 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
SGMS1-203ENST00000429490 DAXXQ9UER7 740 aaPredicted RBP18.66■□□□□ 0.58
SGMS1-203ENST00000429490 FBLN2P98095 1184 aa18.66■□□□□ 0.58
SGMS1-203ENST00000429490 L3MBTL2Q969R5 705 aa18.61■□□□□ 0.57
SGMS1-203ENST00000429490 ZBTB47Q9UFB7 747 aaPredicted RBP18.61■□□□□ 0.57
SGMS1-203ENST00000429490 LRRC9Q6ZRR7 1453 aa18.58■□□□□ 0.56
SGMS1-203ENST00000429490 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
SGMS1-203ENST00000429490 TOP2BQ02880 1626 aa18.56■□□□□ 0.56
SGMS1-203ENST00000429490 DEKP35659 375 aaKnown RBP18.56■□□□□ 0.56
SGMS1-203ENST00000429490 ERICH3Q5RHP9 1530 aa18.56■□□□□ 0.56
SGMS1-203ENST00000429490 MSH5O43196 834 aa18.54■□□□□ 0.56
SGMS1-203ENST00000429490 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
SGMS1-203ENST00000429490 TDRD9Q8NDG6 1382 aaKnown RBP18.54■□□□□ 0.56
SGMS1-203ENST00000429490 NOP58Q9Y2X3 529 aaKnown RBP18.54■□□□□ 0.56
SGMS1-203ENST00000429490 CUX1P39880 1505 aa18.53■□□□□ 0.56
SGMS1-203ENST00000429490 WASHC2AQ641Q2 1341 aa18.52■□□□□ 0.56
SGMS1-203ENST00000429490 CCDC18Q5T9S5 1454 aa18.51■□□□□ 0.55
SGMS1-203ENST00000429490 PRKRIP1Q9H875 184 aaPredicted RBP18.5■□□□□ 0.55
SGMS1-203ENST00000429490 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
SGMS1-203ENST00000429490 RTN4Q9NQC3 1192 aaKnown RBP18.48■□□□□ 0.55
SGMS1-203ENST00000429490 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
SGMS1-203ENST00000429490 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
SGMS1-203ENST00000429490 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
SGMS1-203ENST00000429490 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
SGMS1-203ENST00000429490 UNC13AQ9UPW8 1703 aa18.45■□□□□ 0.54
SGMS1-203ENST00000429490 FMN1Q68DA7 1419 aa18.44■□□□□ 0.54
SGMS1-203ENST00000429490 RGL3Q3MIN7 710 aa18.44■□□□□ 0.54
SGMS1-203ENST00000429490 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
SGMS1-203ENST00000429490 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
SGMS1-203ENST00000429490 CARD11Q9BXL7 1154 aa18.42■□□□□ 0.54
SGMS1-203ENST00000429490 FGD6Q6ZV73 1430 aa18.42■□□□□ 0.54
SGMS1-203ENST00000429490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.542e-6■■■□□ 15
SGMS1-203ENST00000429490 TIAM1Q13009 1591 aa18.41■□□□□ 0.54
SGMS1-203ENST00000429490 FANCIQ9NVI1 1328 aa18.41■□□□□ 0.54
SGMS1-203ENST00000429490 CFDP1Q9UEE9 299 aaPredicted RBP18.39■□□□□ 0.53
SGMS1-203ENST00000429490 C11orf95C9JLR9 678 aaPredicted RBP18.37■□□□□ 0.53
SGMS1-203ENST00000429490 UACAQ9BZF9 1416 aa18.36■□□□□ 0.53
SGMS1-203ENST00000429490 ERICH6BQ5W0A0 696 aa18.35■□□□□ 0.53
SGMS1-203ENST00000429490 PKD2Q13563 968 aa18.34■□□□□ 0.53
SGMS1-203ENST00000429490 CFTRP13569 1480 aa18.33■□□□□ 0.53
SGMS1-203ENST00000429490 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.53
SGMS1-203ENST00000429490 ZBED9Q6R2W3 1325 aa18.33■□□□□ 0.52
SGMS1-203ENST00000429490 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
SGMS1-203ENST00000429490 NEFMP07197 916 aa18.32■□□□□ 0.52
SGMS1-203ENST00000429490 NUDCQ9Y266 331 aa18.32■□□□□ 0.52
SGMS1-203ENST00000429490 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
SGMS1-203ENST00000429490 CC2D1BQ5T0F9 858 aaKnown RBP18.31■□□□□ 0.52
SGMS1-203ENST00000429490 DCAF11Q8TEB1 546 aa18.31■□□□□ 0.52
SGMS1-203ENST00000429490 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
SGMS1-203ENST00000429490 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
SGMS1-203ENST00000429490 TSPY4P0CV99 314 aa18.3■□□□□ 0.52
SGMS1-203ENST00000429490 TSPY10P0CW01 314 aa18.3■□□□□ 0.52
SGMS1-203ENST00000429490 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
SGMS1-203ENST00000429490 CCDC7Q96M83 1385 aa18.29■□□□□ 0.52
SGMS1-203ENST00000429490 EIF5BO60841 1220 aaKnown RBP18.28■□□□□ 0.52
SGMS1-203ENST00000429490 FANCD2Q9BXW9 1451 aa18.27■□□□□ 0.52
SGMS1-203ENST00000429490 IPO9Q96P70 1041 aaKnown RBP18.26■□□□□ 0.51
SGMS1-203ENST00000429490 CASKIN1Q8WXD9 1431 aa18.26■□□□□ 0.51
SGMS1-203ENST00000429490 MYOM3Q5VTT5 1437 aa18.25■□□□□ 0.51
SGMS1-203ENST00000429490 AKNAQ7Z591 1439 aa18.25■□□□□ 0.51
SGMS1-203ENST00000429490 NCOA2Q15596 1464 aa18.25■□□□□ 0.51
SGMS1-203ENST00000429490 CNTLNQ9NXG0 1405 aa18.24■□□□□ 0.51
SGMS1-203ENST00000429490 PCF11O94913 1555 aaKnown RBP18.24■□□□□ 0.51
SGMS1-203ENST00000429490 ARXQ96QS3 562 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms