RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SOGA1O94964 1423 aa23.56■■□□□ 1.36
SMARCA4-203ENST00000429416 A0A0G2JS52 829 aa23.55■■□□□ 1.36
SMARCA4-203ENST00000429416 ZBTB47Q9UFB7 747 aaPredicted RBP23.55■■□□□ 1.36
SMARCA4-203ENST00000429416 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
SMARCA4-203ENST00000429416 CANXP27824 592 aaKnown RBP23.54■■□□□ 1.36
SMARCA4-203ENST00000429416 RGL3Q3MIN7 710 aa23.53■■□□□ 1.36
SMARCA4-203ENST00000429416 CADPSQ9ULU8 1353 aa23.51■■□□□ 1.35
SMARCA4-203ENST00000429416 ZBTB7CA1YPR0 619 aa23.51■■□□□ 1.35
SMARCA4-203ENST00000429416 CEP162Q5TB80 1403 aa23.5■■□□□ 1.35
SMARCA4-203ENST00000429416 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
SMARCA4-203ENST00000429416 ZNF316A6NFI3 1004 aaPredicted RBP23.46■■□□□ 1.35
SMARCA4-203ENST00000429416 HAP1P54257 671 aaPredicted RBP23.42■■□□□ 1.34
SMARCA4-203ENST00000429416 CARMIL2Q6F5E8 1435 aa23.4■■□□□ 1.34
SMARCA4-203ENST00000429416 ATAD2BQ9ULI0 1458 aa23.38■■□□□ 1.33
SMARCA4-203ENST00000429416 CCNB3Q8WWL7 1395 aa23.38■■□□□ 1.33
SMARCA4-203ENST00000429416 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
SMARCA4-203ENST00000429416 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
SMARCA4-203ENST00000429416 TNIKQ9UKE5 1360 aa23.32■■□□□ 1.32
SMARCA4-203ENST00000429416 TMC1Q8TDI8 760 aa23.32■■□□□ 1.32
SMARCA4-203ENST00000429416 GGT6Q6P531 493 aa23.3■■□□□ 1.32
SMARCA4-203ENST00000429416 ABCC8Q09428 1581 aa23.3■■□□□ 1.32
SMARCA4-203ENST00000429416 WIZO95785 1651 aa23.28■■□□□ 1.32
SMARCA4-203ENST00000429416 LMOD2Q6P5Q4 547 aa23.28■■□□□ 1.32
SMARCA4-203ENST00000429416 DDX10Q13206 875 aaKnown RBP23.27■■□□□ 1.32
SMARCA4-203ENST00000429416 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
SMARCA4-203ENST00000429416 SALL2Q9Y467 1007 aaPredicted RBP23.26■■□□□ 1.31
SMARCA4-203ENST00000429416 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
SMARCA4-203ENST00000429416 HIRIP3Q9BW71 556 aaPredicted RBP23.24■■□□□ 1.31
SMARCA4-203ENST00000429416 JPH4Q96JJ6 628 aa23.22■■□□□ 1.31
SMARCA4-203ENST00000429416 TOP2AP11388 1531 aaKnown RBP23.21■■□□□ 1.31
SMARCA4-203ENST00000429416 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.31
SMARCA4-203ENST00000429416 POGKQ9P215 609 aa23.19■■□□□ 1.3
SMARCA4-203ENST00000429416 FAM9BQ8IZU0 186 aa23.18■■□□□ 1.3
SMARCA4-203ENST00000429416 NPM2Q86SE8 214 aaKnown RBP23.16■■□□□ 1.3
SMARCA4-203ENST00000429416 EFCAB2Q5VUJ9 269 aa23.15■■□□□ 1.3
SMARCA4-203ENST00000429416 KANK1Q14678 1352 aa23.14■■□□□ 1.29
SMARCA4-203ENST00000429416 SMARCA4P51532 1647 aa23.13■■□□□ 1.29
SMARCA4-203ENST00000429416 WDR43Q15061 677 aaKnown RBP eCLIP23.13■■□□□ 1.29
SMARCA4-203ENST00000429416 EIF4G2P78344 907 aaKnown RBP eCLIP23.11■■□□□ 1.29
SMARCA4-203ENST00000429416 PPM1GO15355 546 aaPredicted RBP23.09■■□□□ 1.29
SMARCA4-203ENST00000429416 HDGFP51858 240 aaKnown RBP23.08■■□□□ 1.29
SMARCA4-203ENST00000429416 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
SMARCA4-203ENST00000429416 MYT1Q01538 1121 aa23.05■■□□□ 1.28
SMARCA4-203ENST00000429416 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
SMARCA4-203ENST00000429416 HNRNPUQ00839 825 aaKnown RBP eCLIP23.01■■□□□ 1.27
SMARCA4-203ENST00000429416 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.272e-6■□□□□ 10.3
SMARCA4-203ENST00000429416 MRS2Q9HD23 443 aa22.96■■□□□ 1.27
SMARCA4-203ENST00000429416 KIF3BO15066 747 aa22.96■■□□□ 1.27
SMARCA4-203ENST00000429416 CDCA8Q53HL2 280 aa22.95■■□□□ 1.27
SMARCA4-203ENST00000429416 FMN1Q68DA7 1419 aa22.95■■□□□ 1.27
SMARCA4-203ENST00000429416 ARXQ96QS3 562 aa22.95■■□□□ 1.27
SMARCA4-203ENST00000429416 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
SMARCA4-203ENST00000429416 HNRNPMP52272 730 aaKnown RBP eCLIP22.94■■□□□ 1.265e-6■■□□□ 11.8
SMARCA4-203ENST00000429416 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
SMARCA4-203ENST00000429416 PTPRGP23470 1445 aa22.92■■□□□ 1.26
SMARCA4-203ENST00000429416 SIN3AQ96ST3 1273 aa22.91■■□□□ 1.26
SMARCA4-203ENST00000429416 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
SMARCA4-203ENST00000429416 STK26Q9P289 416 aa22.91■■□□□ 1.26
SMARCA4-203ENST00000429416 KNSTRNQ9Y448 316 aa22.91■■□□□ 1.26
SMARCA4-203ENST00000429416 KANK4Q5T7N3 995 aaPredicted RBP22.9■■□□□ 1.26
SMARCA4-203ENST00000429416 SOX12O15370 315 aa22.89■■□□□ 1.26
SMARCA4-203ENST00000429416 SPAG9O60271 1321 aaKnown RBP22.88■■□□□ 1.25
SMARCA4-203ENST00000429416 AEBP2Q6ZN18 517 aaPredicted RBP22.86■■□□□ 1.25
SMARCA4-203ENST00000429416 ARHGAP35Q9NRY4 1499 aa22.86■■□□□ 1.25
SMARCA4-203ENST00000429416 TNNT2P45379 298 aaPredicted RBP22.86■■□□□ 1.25
SMARCA4-203ENST00000429416 FAM69CQ0P6D2 419 aa22.85■■□□□ 1.25
SMARCA4-203ENST00000429416 CFAP53Q96M91 514 aa22.85■■□□□ 1.25
SMARCA4-203ENST00000429416 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
SMARCA4-203ENST00000429416 SRPK2P78362 688 aaKnown RBP22.85■■□□□ 1.25
SMARCA4-203ENST00000429416 PKD2Q13563 968 aa22.84■■□□□ 1.25
SMARCA4-203ENST00000429416 WASHC2CQ9Y4E1 1318 aa22.84■■□□□ 1.25
SMARCA4-203ENST00000429416 RAD54L2Q9Y4B4 1467 aa22.83■■□□□ 1.25
SMARCA4-203ENST00000429416 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.242e-7■■■■□ 24.9
SMARCA4-203ENST00000429416 FOXD1Q16676 465 aa22.81■■□□□ 1.24
SMARCA4-203ENST00000429416 GAPVD1Q14C86 1478 aa22.8■■□□□ 1.24
SMARCA4-203ENST00000429416 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
SMARCA4-203ENST00000429416 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
SMARCA4-203ENST00000429416 FGD5Q6ZNL6 1462 aa22.78■■□□□ 1.24
SMARCA4-203ENST00000429416 SENP3-EIF4A1A0A087X0R7 540 aa22.77■■□□□ 1.24
SMARCA4-203ENST00000429416 NUP155O75694 1391 aa22.77■■□□□ 1.24
SMARCA4-203ENST00000429416 EID1Q9Y6B2 187 aa22.77■■□□□ 1.23
SMARCA4-203ENST00000429416 NUTM2DQ5VT03 806 aaPredicted RBP22.76■■□□□ 1.23
SMARCA4-203ENST00000429416 ANKRD30AQ9BXX3 1397 aa22.75■■□□□ 1.23
SMARCA4-203ENST00000429416 NESP48681 1621 aa22.73■■□□□ 1.23
SMARCA4-203ENST00000429416 PAK3O75914 559 aaPredicted RBP22.73■■□□□ 1.23
SMARCA4-203ENST00000429416 CC2D2AQ9P2K1 1620 aa22.73■■□□□ 1.23
SMARCA4-203ENST00000429416 GTF3C3Q9Y5Q9 886 aa22.73■■□□□ 1.23
SMARCA4-203ENST00000429416 NEUROD2Q15784 382 aa22.72■■□□□ 1.23
SMARCA4-203ENST00000429416 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.7■■□□□ 1.22
SMARCA4-203ENST00000429416 NPHP1O15259 732 aa22.69■■□□□ 1.22
SMARCA4-203ENST00000429416 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
SMARCA4-203ENST00000429416 CCDC18Q5T9S5 1454 aa22.68■■□□□ 1.22
SMARCA4-203ENST00000429416 RSPH4AQ5TD94 716 aa22.68■■□□□ 1.22
SMARCA4-203ENST00000429416 LAS1LQ9Y4W2 734 aaKnown RBP22.67■■□□□ 1.22
SMARCA4-203ENST00000429416 NUDCQ9Y266 331 aa22.67■■□□□ 1.22
SMARCA4-203ENST00000429416 TMF1P82094 1093 aa22.66■■□□□ 1.22
SMARCA4-203ENST00000429416 U2SURPO15042 1029 aaKnown RBP22.66■■□□□ 1.22
SMARCA4-203ENST00000429416 MAPK8IP3Q9UPT6 1336 aa22.65■■□□□ 1.22
SMARCA4-203ENST00000429416 CC2D1BQ5T0F9 858 aaKnown RBP22.65■■□□□ 1.22
SMARCA4-203ENST00000429416 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms